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Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 467 38.65 0 454214..454984 - 256 13541298 - TVN0467 - hypothetical protein 468 42.23 0 455305..456192 - 295 13541299 - TVN0468 - hypothetical protein 469 41.26 0 456214..456579 - 121 13541300 - TVN0469 - hypothetical protein 470 45.87 +1 456921..457223 + 100 13541301 - TVN0470 - thioredoxin reductase 471 28.55 -2 457516..458142 - 208 13541302 - TVN0471 - transcription regulator (HTH) 472 40.99 0 458260..459657 + 465 13541303 - TVN0472 - transporter component 473 38.13 0 459941..461107 + 388 13541304 - TVN0473 - NAD(FAD)-dependent dehydrogenase 474 32.62 -2 461113..461535 + 140 13541305 - TVN0474 - hypothetical protein 475 34.99 -1 461540..462262 - 240 13541306 - TVN0475 - hypothetical protein 476 43.84 0 462512..463720 + 402 13541307 - TVN0476 - transporter component 477 39.06 0 464026..465282 - 418 13541308 - TVN0477 - arginine deiminase 478 38.69 0 465345..466352 - 335 13541309 - TVN0478 - NMD protein (ribosome stability and mRNA decay protein) 479 37.24 -1 466379..466993 - 204 13541310 - TVN0479 - hypothetical protein 480 43.49 0 467069..468151 + 360 13541311 - TVN0480 - hypothetical protein 481 36.96 -1 468197..468499 + 100 13541312 - TVN0481 - hypothetical protein 482 43.45 0 468494..468661 - 55 13541313 - TVN0482 - 30S ribosomal protein S27ae 483 40.33 0 468673..468972 - 99 13541314 rps24e TVN0483 - 30S ribosomal protein S24e 484 39.72 0 468984..469484 - 166 13541315 - TVN0484 - hypothetical protein 485 40.51 0 469462..469656 - 64 13541316 rpoE TVN0485 - DNA-directed RNA polymerase subunit E'' 486 43.18 0 469653..470231 - 192 13541317 - TVN0486 - DNA-directed RNA polymerase subunit E' 487 42.90 0 470348..471445 - 365 13541318 - TVN0487 - molecular chaperone (DnaJ-related) 488 43.51 0 471466..473313 - 615 13541319 dnaK TVN0488 - molecular chaperone DnaK 489 37.10 -1 473313..473843 - 176 13541320 - TVN0489 - molecular chaperone GrpE (heat shock protein) 490 39.25 0 473958..475190 + 410 13541321 - TVN0490 - multidrug efflux permease 491 38.48 0 475215..475661 + 148 13541322 - TVN0491 - phospholipid-binding protein 492 41.74 0 475673..476992 + 439 13541323 - TVN0492 - membrane-bound serine protease 493 37.72 0 477074..477415 + 113 13541324 - TVN0493 - hypothetical protein 494 44.51 +1 477602..479569 + 655 13541325 - TVN0494 - ATP-dependent protease Lon 495 37.32 -1 479924..480700 - 258 13541326 cobS TVN0495 - cobalamin synthase 496 42.10 0 480705..481742 - 345 13541327 - TVN0496 - aspartate aminotransferase 497 41.20 0 483190..483672 - 160 13541328 - TVN0497 - hypothetical protein 498 43.60 0 483803..485350 + 515 13541329 - TVN0498 - RNA polymerase II complex ELP3 subunit 499 40.50 0 485525..487282 + 585 13541330 - TVN0499 - potassium-transporting ATPase subunit A 500 39.96 0 487279..489285 + 668 13541331 - TVN0500 - potassium-transporting ATPase subunit B 501 40.63 0 489279..489908 + 209 13541332 - TVN0501 - potassium-transporting ATPase subunit C 502 40.17 0 489921..490739 - 272 13541333 - TVN0502 - nucleotide-binding protein (UspA-related) 503 41.41 0 491021..491515 + 164 13541334 - TVN0503 - hypothetical protein 504 44.14 0 491501..492490 - 329 13541335 - TVN0504 - kinase related to galactokinase and mevalonate kinase 505 42.81 0 492576..493451 + 291 13541336 - TVN0505 - nucleoside-diphosphate sugar epimerase 506 42.07 0 493454..494392 - 312 13541337 - TVN0506 - tRNA-modifying enzyme 507 45.75 +1 494466..496100 - 544 13541338 - TVN0507 - chaperonin GroEL 508 40.72 0 496174..496809 - 211 13541339 thiE TVN0508 - thiamine-phosphate pyrophosphorylase 509 41.67 0 496806..497861 - 351 13541340 - TVN0509 - hydrogenase maturation factor 510 42.86 0 497989..499542 + 517 13541341 - TVN0510 - amino acid transporter 511 36.92 -1 499547..500467 + 306 13541342 - TVN0511 - ABC-type peptide transport system, ATPase component 512 41.09 0 500469..501242 + 257 13541343 - TVN0512 - ABC-type peptide transporter, ATPase component 513 41.20 0 501372..502172 - 266 13541344 - TVN0513 - phosphomethylpyrimidine kinase 514 41.12 0 502242..502922 - 226 13541345 - TVN0514 - transcription regulator 515 40.49 0 503027..504283 - 418 13541346 - TVN0515 - metal-dependent hydrolase 516 40.81 0 504400..504867 + 155 13541347 - TVN0516 - transcription regulator 517 43.36 0 504854..506299 + 481 13541348 - TVN0517 - multidrug efflux permease 518 41.97 0 506316..507890 + 524 13541349 - TVN0518 - hypothetical protein 519 40.12 0 509497..510159 + 220 13541350 - TVN0519 - transcription regulator of a riboflavin/FAD biosynthetic operon 520 34.98 -1 510164..510406 - 80 13541351 - TVN0520 - hypothetical protein 521 43.46 0 510425..512704 - 759 13541352 - TVN0521 - phosphoribosylformylglycinamidine synthase II 522 40.59 0 512809..513897 - 362 13541353 - TVN0522 - glycosyltransferase 523 42.22 0 513972..515018 - 348 13541354 - TVN0523 - hypothetical protein 524 43.75 0 515205..516404 + 399 13541355 - TVN0524 - multidrug efflux permease 525 41.34 0 516499..517110 - 203 13541356 - TVN0525 - MarC family integral membrane protein 526 41.87 0 517148..517873 - 241 13541357 - TVN0526 - ABC-type multidrug transport system, permease component 527 43.21 0 517863..518702 - 279 13541358 - TVN0527 - ABC-type daunorubicin transport system, ATPase component 528 41.69 0 518780..519952 + 390 13541359 - TVN0528 - nucleoside-diphosphate-sugar epimerase 529 42.65 0 519949..520689 - 246 13541360 - TVN0529 - dTDP-glucose pyrophosphorylase 530 43.19 0 520765..521991 + 408 13541361 pgk TVN0530 - phosphoglycerate kinase 531 36.64 -1 521996..522388 + 130 13541362 - TVN0531 - prefoldin subunit alpha 532 39.47 0 522395..523258 + 287 13541363 - TVN0532 - Signal recognition particle GTPase 533 38.58 0 523302..523625 + 107 13541364 - TVN0533 - nucleic acid binding protein 534 40.46 0 523625..524887 + 420 13541365 - TVN0534 - replication factor C large subunit 535 45.29 +1 524958..525551 + 197 13541366 - TVN0535 - 50S ribosomal protein L15e 536 42.44 0 525832..526731 + 299 13541367 - TVN0536 - polysaccharide deacetylase 537 42.05 0 526852..527241 + 129 13541368 - TVN0537 - translation initiation factor IF-5A 538 40.68 0 527199..528110 + 303 13541369 - TVN0538 - agmatinase 539 44.63 +1 528148..528678 - 176 13541370 rpl10e TVN0539 - 50S ribosomal protein L10e 540 39.51 0 528853..529095 - 80 13541371 - TVN0540 - hypothetical protein 541 41.43 0 529230..531155 + 641 13541372 gyrB TVN0541 - DNA gyrase subunit B 542 42.71 0 531167..533545 + 792 13541373 - TVN0542 - DNA gyrase subunit A 543 40.03 0 533595..534221 + 208 13541374 - TVN0543 - nicotinamidase-like amidase 544 43.08 0 534246..535415 + 389 13541375 - TVN0544 - ABC-type molybdate transport system, solute-binding component 545 41.51 0 535417..536211 + 264 13541376 - TVN0545 - ABC-type molybdate transport system, permease component 546 40.53 0 536198..537100 + 300 13541377 - TVN0546 - ABC-type molybdate transporter, ATPase component 547 39.97 0 537452..538204 - 250 13541378 - TVN0547 - cell wall biosynthesis glycosyltransferase 548 39.15 0 538221..538409 - 62 13541379 - TVN0548 - hypothetical protein 549 40.50 0 538469..539431 - 320 13541380 - TVN0549 - hypothetical protein 550 40.18 0 539478..539813 - 111 13541381 - TVN0550 - nucleic acid binding protein 551 37.78 0 539914..540138 + 74 13541382 - TVN0551 - phosphoribosylformylglycinamidine synthase 552 38.25 0 540271..541998 + 575 13541383 - TVN0552 - hypothetical protein 553 38.26 0 542231..542920 + 229 13541384 - TVN0553 - hypothetical protein 554 45.28 +1 542914..543273 - 119 13541385 - TVN0554 - hypothetical protein 555 40.36 0 543386..543769 + 127 13541386 - TVN0555 - 30S ribosomal protein S8e 556 41.57 0 543776..544030 + 84 13541387 - TVN0556 - Signal recognition particle 19 kDa protein 557 39.63 0 544022..545005 - 327 13541388 - TVN0557 - DNA primase large subunit 558 41.64 0 545002..546084 - 360 13541389 - TVN0558 - putative proline dipeptidase 559 40.60 0 546468..547169 + 233 13541390 radB TVN0559 - DNA repair and recombination protein RadB 560 40.87 0 547159..548166 + 335 13541391 - TVN0560 - flap endonuclease-1 561 40.46 0 548252..549499 + 415 13541392 - TVN0561 - major facilitator superfamily permease 562 45.74 +1 549581..550096 + 171 13541393 rps13p TVN0562 - 30S ribosomal protein S13P 563 44.28 0 550107..550709 + 200 13541394 rps4p TVN0563 - 30S ribosomal protein S4 564 45.36 +1 550687..551085 + 132 13541395 rps11p TVN0564 - 30S ribosomal protein S11P 565 43.26 0 551086..551901 + 271 13541396 - TVN0565 - DNA-directed RNA polymerase subunit D 566 41.31 0 552135..553325 + 396 13541397 - TVN0566 - molybdopterin biosynthesis protein 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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