version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 348 42.08 0 343579..345339 + 586 13541179 - TVN0348 - preprotein translocase SecY 349 46.15 +1 345340..345885 + 181 13541180 - TVN0349 - adenylate kinase 350 41.00 0 345882..346559 + 225 13541181 - TVN0350 - hypothetical protein 351 39.09 0 346556..347128 + 190 13541182 - TVN0351 - cytidylate kinase 352 43.03 0 347179..348240 + 353 13541183 - TVN0352 - H/ACA RNA-protein complex component Cbf5p 353 43.48 0 348263..348814 + 183 13541184 - TVN0353 - Nop56p-related protein (ribosomal biogenesis) 354 44.42 +1 348801..350225 - 474 13541185 - TVN0354 - amidophosphoribosyltransferase 355 46.06 +1 350173..350337 - 54 13541186 rpl37e TVN0355 - 50S ribosomal protein L37e 356 39.68 0 350334..350585 - 83 13541187 - TVN0356 - small nuclear ribonucleoprotein 357 43.05 0 350720..351553 + 277 13541188 - TVN0357 - nucleoside-diphosphate-sugar epimerase 358 38.25 0 351555..352022 - 155 13541189 - TVN0358 - hypothetical protein 359 39.00 0 352110..353009 + 299 13541190 - TVN0359 - translation elongation factor (GTPase) 360 44.54 +1 353081..353785 + 234 13541191 - TVN0360 - hypothetical protein 361 39.57 0 354006..355256 + 416 13541192 - TVN0361 - hypothetical protein 362 40.31 0 355283..357232 + 649 13541193 - TVN0362 - polyferredoxin 363 42.67 0 357199..357873 - 224 13541194 - TVN0363 - enoyl-CoA hydratase 364 38.89 0 357925..358554 + 209 13541195 - TVN0364 - DNA-binding protein 365 37.57 0 358547..359065 - 172 13541196 - TVN0365 - hypothetical protein 366 46.78 +1 359295..360023 + 242 13541197 - TVN0366 - Rieske Fe-S protein 367 43.25 0 360034..361647 + 537 13541198 - TVN0367 - cytochrome b subunit of the bc complex 368 44.44 +1 361650..362531 - 293 13541199 - TVN0368 - carboxyphosphonoenolpyruvate phosphonomutase 369 41.22 0 362515..363846 - 443 13541200 - TVN0369 - hypothetical protein 370 41.27 0 363970..364788 - 272 13541201 - TVN0370 - Sec-independent protein secretion pathway component (TatC-related) 371 39.60 0 364778..365080 - 100 13541202 - TVN0371 - Sec-independent protein secretion pathway component 372 42.50 0 365507..366346 + 279 13541203 - TVN0372 - Rieske Fe-S protein 373 41.41 0 366349..367524 + 391 13541204 - TVN0373 - cytochrome b subunit of the bc complex 374 40.10 0 367521..367712 + 63 13541205 - TVN0374 - hypothetical protein 375 36.96 -1 367751..368053 + 100 13541206 - TVN0375 - hypothetical protein 376 37.78 0 368053..368277 + 74 13541207 - TVN0376 - hypothetical protein 377 34.66 -1 368274..368801 - 175 13541208 - TVN0377 - transcription regulator 378 37.43 -1 368934..369104 - 56 13541209 - TVN0378 - transcription regulator (HTH) 379 40.65 0 369160..371058 - 632 13541210 - TVN0379 - ATPase 380 38.33 0 371051..371671 - 206 13541211 - TVN0380 - hypothetical protein 381 41.24 0 371934..372401 + 155 13541212 - TVN0381 - hypothetical protein 382 39.18 0 372394..373521 + 375 13541213 - TVN0382 - ATPase of the AAA+ class involved in cell division 383 40.69 0 373629..374267 + 212 13541214 - TVN0383 - coiled-coil domain-containing protein 384 42.07 0 374366..374674 - 102 13541215 - TVN0384 - hypothetical protein 385 40.83 0 374780..375766 + 328 13541216 - TVN0385 - homoserine dehydrogenase 386 43.30 0 375941..376753 + 270 13541217 - TVN0386 - ABC-type nitrate transporter, ATPase component 387 40.90 0 376750..378375 + 541 13541218 - TVN0387 - ABC-type nitrate transport permease 388 46.32 +1 378387..378848 - 153 13541219 - TVN0388 - hypothetical protein 389 37.76 0 378908..379201 - 97 13541220 - TVN0389 - hypothetical protein 390 40.37 0 379541..380506 + 321 13541221 - TVN0390 - dehydrogenase 391 34.78 -1 380519..380863 + 114 13541222 - TVN0391 - hypothetical protein 392 39.07 0 380902..381372 - 156 13541223 - TVN0392 - hypothetical protein 393 38.32 0 382012..383193 + 393 13541224 - TVN0393 - Kef-type K+ transport system, membrane component 394 42.50 0 383770..384816 - 348 13541225 - TVN0394 - major facilitator superfamily permease 395 42.22 0 385512..385916 + 134 13541226 - TVN0395 - sterol carrier protein 396 40.91 0 385927..387048 + 373 13541227 - TVN0396 - alcohol dehydrogenase IV 397 43.49 0 387045..388541 + 498 13541228 - TVN0397 - NAD-dependent aldehyde dehydrogenase 398 42.55 0 388568..389749 - 393 13541229 - TVN0398 - 2-amino-3-ketobutyrate coenzyme A ligase 399 41.17 0 389981..390580 + 199 13541230 rps2P TVN0399 - 30S ribosomal protein S2 400 40.16 0 390826..391704 - 292 13541231 - TVN0400 - tRNA splicing endonuclease 401 38.95 0 391697..392212 - 171 13541232 - TVN0401 - GTPase 402 39.95 0 392327..393535 + 402 13541233 - TVN0402 - transcription regulator 403 38.80 0 393600..394586 + 328 13541234 - TVN0403 - fused phosphopantetheine adenylyltransferase/unknown domain-containing protein 404 39.39 0 394567..395457 - 296 13541235 - TVN0404 - Ca2+/Na+ antiporter 405 44.27 0 395474..395866 - 130 13541236 - TVN0405 - S-adenosylmethionine decarboxylase proenzyme 406 40.58 0 396051..396809 - 252 13541237 - TVN0406 - transcription regulator 407 39.14 0 396861..397721 - 286 13541238 ubiA TVN0407 - prenyltransferase 408 43.22 0 397730..399175 - 481 13541239 - TVN0408 - 4-hydroxybenzoate decarboxylase 409 42.12 0 399197..400561 - 454 13541240 - TVN0409 - cobyrinic acid a,c-diamide synthase 410 40.34 0 400558..401313 - 251 13541241 - TVN0410 - hypothetical protein 411 39.68 0 401285..401473 - 62 13541242 - TVN0411 - H/ACA RNA-protein complex component Nop10p 412 42.48 0 401470..402234 - 254 13541243 - TVN0412 - translation initiation factor IF-2 subunit alpha 413 42.93 0 402231..402428 - 65 13541244 rps27e TVN0413 - 30S ribosomal protein S27e 414 44.68 +1 402431..402712 - 93 13541245 rpl44e TVN0414 - 50S ribosomal protein L44e 415 40.62 0 403403..403690 - 95 13541246 - TVN0415 - hypothetical protein 416 38.52 0 404043..404408 + 121 13541247 - TVN0416 - hypothetical protein 417 42.70 0 404401..405222 - 273 13541248 - TVN0417 - spermidine synthase 418 42.66 0 405413..406345 + 310 13541249 - TVN0418 - putative deoxyhypusine synthase 419 41.61 0 406476..406934 + 152 13541250 - TVN0419 - peroxiredoxin 420 47.94 +2 407122..407436 - 104 13541251 rpl12p TVN0420 - 50S ribosomal protein L12P 421 42.86 0 407450..408394 - 314 13541252 rplP0 TVN0421 - acidic ribosomal protein P0 422 43.73 0 408391..409044 - 217 13541253 rpl1P TVN0422 - 50S ribosomal protein L1P 423 45.70 +1 409059..409535 - 158 13541254 rpl11p TVN0423 - 50S ribosomal protein L11P 424 44.74 +1 409698..410258 + 186 13541255 - TVN0424 - intracellular protease 425 39.08 0 410584..411609 + 341 13541256 - TVN0425 - hypothetical protein 426 39.19 0 411662..412771 - 369 13541257 - TVN0426 - mevalonate pyrophosphate decarboxylase 427 42.81 0 414098..414403 + 101 13541258 - TVN0427 - hypothetical protein 428 42.54 0 415361..417271 - 636 13541259 - TVN0428 - hypothetical protein 429 40.64 0 417372..419177 + 601 13541260 - TVN0429 - glycogen debranching protein 430 42.34 0 419174..420283 + 369 13541261 - TVN0430 - glycosyltransferase 431 41.07 0 420280..421416 + 378 13541262 - TVN0431 - Alpha-amylase 432 46.06 +1 421440..422264 + 274 13541263 - TVN0432 - asparaginase 433 45.36 +1 422270..422635 + 121 13541264 - TVN0433 - hypothetical protein 434 38.14 0 422661..423014 - 117 13541265 - TVN0434 - hypothetical protein 435 39.37 0 423096..424040 - 314 13541266 - TVN0435 - nucleoside-diphosphate-sugar pyrophosphorylase 436 44.54 +1 424218..425555 + 445 13541267 - TVN0436 - major facilitator superfamily permease 437 45.10 +1 425663..426886 - 407 13541268 - TVN0437 - RNA processing exonuclease 438 42.25 0 426892..427665 - 257 13541269 - TVN0438 - 5'-methylthioadenosine phosphorylase II 439 40.08 0 427721..428431 - 236 13541270 - TVN0439 - asparagine synthase 440 43.71 0 428481..430262 + 593 13541271 - TVN0440 - ATPase 441 43.08 0 430273..430785 + 170 13541272 - TVN0441 - hypothetical protein 442 41.57 0 430782..431825 - 347 13541273 - TVN0442 - adenine-specific DNA methylase 443 43.70 0 432246..432380 + 44 13541274 - TVN0443 - peroxiredoxin fragment (inactivated) 444 37.78 0 432540..432809 + 89 13541275 - TVN0444 - peroxiredoxin fragment (inactivated) 445 42.04 0 433464..434393 - 309 13541276 - TVN0445 - ATPase 446 33.99 -2 434445..434747 - 100 13541277 - TVN0446 - hypothetical protein 447 38.91 0 434910..435626 + 238 13541278 - TVN0447 - DNA-binding protein 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.