version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 326 39.68 0 333990..334241 + 83 13541157 rplW TVN0326 - 50S ribosomal protein L23 327 45.96 +1 334250..334954 + 234 13541158 rpl2p TVN0327 - 50S ribosomal protein L2P 328 41.01 0 334941..335396 + 151 13541159 rps19p TVN0328 - 30S ribosomal protein S19P 329 42.54 0 335393..335848 + 151 13541160 rpl22p TVN0329 - 50S ribosomal protein L22P 330 41.74 0 335845..336522 + 225 13541161 rps3p TVN0330 - 30S ribosomal protein S3P 331 45.27 +1 336449..336649 + 66 13541162 rpmC TVN0331 - 50S ribosomal protein L29 332 41.58 0 336650..336952 + 100 13541163 - TVN0332 - translation initiation factor Sui1 333 39.26 0 336949..337218 + 89 13541164 - TVN0333 - ribonuclease P protein component 1 334 44.55 +1 337220..337549 + 109 13541165 rps17p TVN0334 - 30S ribosomal protein S17P 335 46.62 +1 337546..337944 + 132 13541166 rpl14p TVN0335 - 50S ribosomal protein L14P 336 39.27 0 337953..338390 + 145 13541167 rpl24p TVN0336 - 50S ribosomal protein L24P 337 43.08 0 338380..339087 + 235 13541168 - TVN0337 - 30S ribosomal protein S4e 338 40.94 0 339084..339596 + 170 13541169 rpl5p TVN0338 - 50S ribosomal protein L5P 339 44.44 +1 339601..339762 + 53 13541170 rps14P TVN0339 - 30S ribosomal protein S14P 340 37.69 0 339772..340161 + 129 13541171 rps8p TVN0340 - 30S ribosomal protein S8P 341 40.41 0 340175..340711 + 178 13541172 rpl6p TVN0341 - 50S ribosomal protein L6P 342 42.12 0 340713..341099 + 128 13541173 rpl32e TVN0342 - 50S ribosomal protein L32e 343 41.33 0 341109..341558 + 149 13541174 rpl19e TVN0343 - 50S ribosomal protein L19e 344 41.82 0 341564..342046 + 160 13541175 rpl18p TVN0344 - 50S ribosomal protein L18P 345 44.14 0 342043..342708 + 221 13541176 rps5p TVN0345 - 30S ribosomal protein S5P 346 41.16 0 342686..343183 + 165 13541177 rpl30p TVN0346 - 50S ribosomal protein L30P 347 41.78 0 343164..343601 + 145 13541178 rpl15p TVN0347 - 50S ribosomal protein L15P 348 42.08 0 343579..345339 + 586 13541179 - TVN0348 - preprotein translocase SecY 349 46.15 +1 345340..345885 + 181 13541180 - TVN0349 - adenylate kinase 350 41.00 0 345882..346559 + 225 13541181 - TVN0350 - hypothetical protein 351 39.09 0 346556..347128 + 190 13541182 - TVN0351 - cytidylate kinase 352 43.03 0 347179..348240 + 353 13541183 - TVN0352 - H/ACA RNA-protein complex component Cbf5p 353 43.48 0 348263..348814 + 183 13541184 - TVN0353 - Nop56p-related protein (ribosomal biogenesis) 354 44.42 +1 348801..350225 - 474 13541185 - TVN0354 - amidophosphoribosyltransferase 355 46.06 +1 350173..350337 - 54 13541186 rpl37e TVN0355 - 50S ribosomal protein L37e 356 39.68 0 350334..350585 - 83 13541187 - TVN0356 - small nuclear ribonucleoprotein 357 43.05 0 350720..351553 + 277 13541188 - TVN0357 - nucleoside-diphosphate-sugar epimerase 358 38.25 0 351555..352022 - 155 13541189 - TVN0358 - hypothetical protein 359 39.00 0 352110..353009 + 299 13541190 - TVN0359 - translation elongation factor (GTPase) 360 44.54 +1 353081..353785 + 234 13541191 - TVN0360 - hypothetical protein 361 39.57 0 354006..355256 + 416 13541192 - TVN0361 - hypothetical protein 362 40.31 0 355283..357232 + 649 13541193 - TVN0362 - polyferredoxin 363 42.67 0 357199..357873 - 224 13541194 - TVN0363 - enoyl-CoA hydratase 364 38.89 0 357925..358554 + 209 13541195 - TVN0364 - DNA-binding protein 365 37.57 0 358547..359065 - 172 13541196 - TVN0365 - hypothetical protein 366 46.78 +1 359295..360023 + 242 13541197 - TVN0366 - Rieske Fe-S protein 367 43.25 0 360034..361647 + 537 13541198 - TVN0367 - cytochrome b subunit of the bc complex 368 44.44 +1 361650..362531 - 293 13541199 - TVN0368 - carboxyphosphonoenolpyruvate phosphonomutase 369 41.22 0 362515..363846 - 443 13541200 - TVN0369 - hypothetical protein 370 41.27 0 363970..364788 - 272 13541201 - TVN0370 - Sec-independent protein secretion pathway component (TatC-related) 371 39.60 0 364778..365080 - 100 13541202 - TVN0371 - Sec-independent protein secretion pathway component 372 42.50 0 365507..366346 + 279 13541203 - TVN0372 - Rieske Fe-S protein 373 41.41 0 366349..367524 + 391 13541204 - TVN0373 - cytochrome b subunit of the bc complex 374 40.10 0 367521..367712 + 63 13541205 - TVN0374 - hypothetical protein 375 36.96 -1 367751..368053 + 100 13541206 - TVN0375 - hypothetical protein 376 37.78 0 368053..368277 + 74 13541207 - TVN0376 - hypothetical protein 377 34.66 -1 368274..368801 - 175 13541208 - TVN0377 - transcription regulator 378 37.43 -1 368934..369104 - 56 13541209 - TVN0378 - transcription regulator (HTH) 379 40.65 0 369160..371058 - 632 13541210 - TVN0379 - ATPase 380 38.33 0 371051..371671 - 206 13541211 - TVN0380 - hypothetical protein 381 41.24 0 371934..372401 + 155 13541212 - TVN0381 - hypothetical protein 382 39.18 0 372394..373521 + 375 13541213 - TVN0382 - ATPase of the AAA+ class involved in cell division 383 40.69 0 373629..374267 + 212 13541214 - TVN0383 - coiled-coil domain-containing protein 384 42.07 0 374366..374674 - 102 13541215 - TVN0384 - hypothetical protein 385 40.83 0 374780..375766 + 328 13541216 - TVN0385 - homoserine dehydrogenase 386 43.30 0 375941..376753 + 270 13541217 - TVN0386 - ABC-type nitrate transporter, ATPase component 387 40.90 0 376750..378375 + 541 13541218 - TVN0387 - ABC-type nitrate transport permease 388 46.32 +1 378387..378848 - 153 13541219 - TVN0388 - hypothetical protein 389 37.76 0 378908..379201 - 97 13541220 - TVN0389 - hypothetical protein 390 40.37 0 379541..380506 + 321 13541221 - TVN0390 - dehydrogenase 391 34.78 -1 380519..380863 + 114 13541222 - TVN0391 - hypothetical protein 392 39.07 0 380902..381372 - 156 13541223 - TVN0392 - hypothetical protein 393 38.32 0 382012..383193 + 393 13541224 - TVN0393 - Kef-type K+ transport system, membrane component 394 42.50 0 383770..384816 - 348 13541225 - TVN0394 - major facilitator superfamily permease 395 42.22 0 385512..385916 + 134 13541226 - TVN0395 - sterol carrier protein 396 40.91 0 385927..387048 + 373 13541227 - TVN0396 - alcohol dehydrogenase IV 397 43.49 0 387045..388541 + 498 13541228 - TVN0397 - NAD-dependent aldehyde dehydrogenase 398 42.55 0 388568..389749 - 393 13541229 - TVN0398 - 2-amino-3-ketobutyrate coenzyme A ligase 399 41.17 0 389981..390580 + 199 13541230 rps2P TVN0399 - 30S ribosomal protein S2 400 40.16 0 390826..391704 - 292 13541231 - TVN0400 - tRNA splicing endonuclease 401 38.95 0 391697..392212 - 171 13541232 - TVN0401 - GTPase 402 39.95 0 392327..393535 + 402 13541233 - TVN0402 - transcription regulator 403 38.80 0 393600..394586 + 328 13541234 - TVN0403 - fused phosphopantetheine adenylyltransferase/unknown domain-containing protein 404 39.39 0 394567..395457 - 296 13541235 - TVN0404 - Ca2+/Na+ antiporter 405 44.27 0 395474..395866 - 130 13541236 - TVN0405 - S-adenosylmethionine decarboxylase proenzyme 406 40.58 0 396051..396809 - 252 13541237 - TVN0406 - transcription regulator 407 39.14 0 396861..397721 - 286 13541238 ubiA TVN0407 - prenyltransferase 408 43.22 0 397730..399175 - 481 13541239 - TVN0408 - 4-hydroxybenzoate decarboxylase 409 42.12 0 399197..400561 - 454 13541240 - TVN0409 - cobyrinic acid a,c-diamide synthase 410 40.34 0 400558..401313 - 251 13541241 - TVN0410 - hypothetical protein 411 39.68 0 401285..401473 - 62 13541242 - TVN0411 - H/ACA RNA-protein complex component Nop10p 412 42.48 0 401470..402234 - 254 13541243 - TVN0412 - translation initiation factor IF-2 subunit alpha 413 42.93 0 402231..402428 - 65 13541244 rps27e TVN0413 - 30S ribosomal protein S27e 414 44.68 +1 402431..402712 - 93 13541245 rpl44e TVN0414 - 50S ribosomal protein L44e 415 40.62 0 403403..403690 - 95 13541246 - TVN0415 - hypothetical protein 416 38.52 0 404043..404408 + 121 13541247 - TVN0416 - hypothetical protein 417 42.70 0 404401..405222 - 273 13541248 - TVN0417 - spermidine synthase 418 42.66 0 405413..406345 + 310 13541249 - TVN0418 - putative deoxyhypusine synthase 419 41.61 0 406476..406934 + 152 13541250 - TVN0419 - peroxiredoxin 420 47.94 +2 407122..407436 - 104 13541251 rpl12p TVN0420 - 50S ribosomal protein L12P 421 42.86 0 407450..408394 - 314 13541252 rplP0 TVN0421 - acidic ribosomal protein P0 422 43.73 0 408391..409044 - 217 13541253 rpl1P TVN0422 - 50S ribosomal protein L1P 423 45.70 +1 409059..409535 - 158 13541254 rpl11p TVN0423 - 50S ribosomal protein L11P 424 44.74 +1 409698..410258 + 186 13541255 - TVN0424 - intracellular protease 425 39.08 0 410584..411609 + 341 13541256 - TVN0425 - hypothetical protein 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.