version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 292 39.37 0 305692..306138 + 148 13541123 - TVN0292 - Fe2+ uptake regulation protein 293 41.26 0 306280..307212 - 310 13541124 - TVN0293 - GMP synthase subunit B 294 44.03 0 307259..307576 - 105 13541125 - TVN0294 - hypothetical protein 295 39.74 0 307586..307819 - 77 13541126 - TVN0295 - transcription regulator 296 40.48 0 307952..308581 + 209 13541127 - TVN0296 - organic radical activating protein 297 40.08 0 308639..309943 + 434 13541128 - TVN0297 - glycine dehydrogenase subunit 1 298 41.79 0 309940..311358 + 472 13541129 - TVN0298 - glycine dehydrogenase subunit 2 299 40.75 0 311426..312436 + 336 13541130 - TVN0299 - heme d1 biosynthesis protein (NirJ-related) 300 37.67 0 312896..313402 + 168 13541131 - TVN0300 - hypothetical protein 301 38.15 0 313409..314239 - 276 13541132 - TVN0301 - metal-dependent hydrolase 302 40.33 0 314249..315463 - 404 13541133 - TVN0302 - hypothetical protein 303 41.13 0 315520..316917 - 465 13541134 - TVN0303 - phosphate ABC transporter permease 304 42.17 0 317051..317752 + 233 13541135 - TVN0304 - proteasome subunit alpha 305 41.85 0 317790..318482 + 230 13541136 - TVN0305 - putative RNA-associated protein 306 45.29 +1 318533..319243 + 236 13541137 - TVN0306 - exosome complex RNA-binding protein Rrp4 307 42.70 0 319203..319949 + 248 13541138 - TVN0307 - exosome complex exonuclease Rrp41 308 43.93 0 319952..320734 + 260 13541139 - TVN0308 - exosome complex RNA-binding protein Rrp42 309 46.50 +1 320740..320982 + 80 13541140 rpl37ae TVN0309 - 50S ribosomal protein L37Ae 310 39.86 0 320979..321116 + 45 13541141 - TVN0310 - DNA-directed RNA polymerase subunit P 311 39.85 0 321120..322286 + 388 13541142 - TVN0311 - pseudouridylate synthase 312 44.44 +1 322289..322585 + 98 13541143 - TVN0312 - 50S ribosomal protein L21e 313 35.58 -1 322589..322900 + 103 13541144 - TVN0313 - hypothetical protein 314 41.17 0 322914..323462 + 182 13541145 - TVN0314 - RNA-binding protein 315 38.80 0 323459..324172 + 237 13541146 - TVN0315 - rRNA dimethyladenosine transferase 316 42.55 0 324117..324941 - 274 13541147 - TVN0316 - membrane protease subunit 317 35.06 -1 326039..326443 + 134 13541148 - TVN0317 - transcription regulator 318 35.42 -1 326520..326903 + 127 13541149 - TVN0318 - hypothetical protein 319 42.26 0 326994..327161 + 55 13541150 - TVN0319 - preprotein translocase subunit SecG 320 40.08 0 327166..328128 - 320 13541151 - TVN0320 - mevalonate pyrophosphate decarboxylase 321 37.48 0 328339..329157 + 272 13541152 - TVN0321 - hypothetical protein 322 38.50 0 329566..331095 + 509 13541153 - TVN0322 - membrane-associated Zn-dependent protease 1 323 44.12 0 331403..331810 + 135 13541154 - TVN0323 - hypothetical protein 324 42.77 0 332231..333226 + 331 13541155 rpl3p TVN0324 - 50S ribosomal protein L3P 325 43.10 0 333223..333990 + 255 13541156 rpl4lp TVN0325 - 50S ribosomal protein L4P 326 39.68 0 333990..334241 + 83 13541157 rplW TVN0326 - 50S ribosomal protein L23 327 45.96 +1 334250..334954 + 234 13541158 rpl2p TVN0327 - 50S ribosomal protein L2P 328 41.01 0 334941..335396 + 151 13541159 rps19p TVN0328 - 30S ribosomal protein S19P 329 42.54 0 335393..335848 + 151 13541160 rpl22p TVN0329 - 50S ribosomal protein L22P 330 41.74 0 335845..336522 + 225 13541161 rps3p TVN0330 - 30S ribosomal protein S3P 331 45.27 +1 336449..336649 + 66 13541162 rpmC TVN0331 - 50S ribosomal protein L29 332 41.58 0 336650..336952 + 100 13541163 - TVN0332 - translation initiation factor Sui1 333 39.26 0 336949..337218 + 89 13541164 - TVN0333 - ribonuclease P protein component 1 334 44.55 +1 337220..337549 + 109 13541165 rps17p TVN0334 - 30S ribosomal protein S17P 335 46.62 +1 337546..337944 + 132 13541166 rpl14p TVN0335 - 50S ribosomal protein L14P 336 39.27 0 337953..338390 + 145 13541167 rpl24p TVN0336 - 50S ribosomal protein L24P 337 43.08 0 338380..339087 + 235 13541168 - TVN0337 - 30S ribosomal protein S4e 338 40.94 0 339084..339596 + 170 13541169 rpl5p TVN0338 - 50S ribosomal protein L5P 339 44.44 +1 339601..339762 + 53 13541170 rps14P TVN0339 - 30S ribosomal protein S14P 340 37.69 0 339772..340161 + 129 13541171 rps8p TVN0340 - 30S ribosomal protein S8P 341 40.41 0 340175..340711 + 178 13541172 rpl6p TVN0341 - 50S ribosomal protein L6P 342 42.12 0 340713..341099 + 128 13541173 rpl32e TVN0342 - 50S ribosomal protein L32e 343 41.33 0 341109..341558 + 149 13541174 rpl19e TVN0343 - 50S ribosomal protein L19e 344 41.82 0 341564..342046 + 160 13541175 rpl18p TVN0344 - 50S ribosomal protein L18P 345 44.14 0 342043..342708 + 221 13541176 rps5p TVN0345 - 30S ribosomal protein S5P 346 41.16 0 342686..343183 + 165 13541177 rpl30p TVN0346 - 50S ribosomal protein L30P 347 41.78 0 343164..343601 + 145 13541178 rpl15p TVN0347 - 50S ribosomal protein L15P 348 42.08 0 343579..345339 + 586 13541179 - TVN0348 - preprotein translocase SecY 349 46.15 +1 345340..345885 + 181 13541180 - TVN0349 - adenylate kinase 350 41.00 0 345882..346559 + 225 13541181 - TVN0350 - hypothetical protein 351 39.09 0 346556..347128 + 190 13541182 - TVN0351 - cytidylate kinase 352 43.03 0 347179..348240 + 353 13541183 - TVN0352 - H/ACA RNA-protein complex component Cbf5p 353 43.48 0 348263..348814 + 183 13541184 - TVN0353 - Nop56p-related protein (ribosomal biogenesis) 354 44.42 +1 348801..350225 - 474 13541185 - TVN0354 - amidophosphoribosyltransferase 355 46.06 +1 350173..350337 - 54 13541186 rpl37e TVN0355 - 50S ribosomal protein L37e 356 39.68 0 350334..350585 - 83 13541187 - TVN0356 - small nuclear ribonucleoprotein 357 43.05 0 350720..351553 + 277 13541188 - TVN0357 - nucleoside-diphosphate-sugar epimerase 358 38.25 0 351555..352022 - 155 13541189 - TVN0358 - hypothetical protein 359 39.00 0 352110..353009 + 299 13541190 - TVN0359 - translation elongation factor (GTPase) 360 44.54 +1 353081..353785 + 234 13541191 - TVN0360 - hypothetical protein 361 39.57 0 354006..355256 + 416 13541192 - TVN0361 - hypothetical protein 362 40.31 0 355283..357232 + 649 13541193 - TVN0362 - polyferredoxin 363 42.67 0 357199..357873 - 224 13541194 - TVN0363 - enoyl-CoA hydratase 364 38.89 0 357925..358554 + 209 13541195 - TVN0364 - DNA-binding protein 365 37.57 0 358547..359065 - 172 13541196 - TVN0365 - hypothetical protein 366 46.78 +1 359295..360023 + 242 13541197 - TVN0366 - Rieske Fe-S protein 367 43.25 0 360034..361647 + 537 13541198 - TVN0367 - cytochrome b subunit of the bc complex 368 44.44 +1 361650..362531 - 293 13541199 - TVN0368 - carboxyphosphonoenolpyruvate phosphonomutase 369 41.22 0 362515..363846 - 443 13541200 - TVN0369 - hypothetical protein 370 41.27 0 363970..364788 - 272 13541201 - TVN0370 - Sec-independent protein secretion pathway component (TatC-related) 371 39.60 0 364778..365080 - 100 13541202 - TVN0371 - Sec-independent protein secretion pathway component 372 42.50 0 365507..366346 + 279 13541203 - TVN0372 - Rieske Fe-S protein 373 41.41 0 366349..367524 + 391 13541204 - TVN0373 - cytochrome b subunit of the bc complex 374 40.10 0 367521..367712 + 63 13541205 - TVN0374 - hypothetical protein 375 36.96 -1 367751..368053 + 100 13541206 - TVN0375 - hypothetical protein 376 37.78 0 368053..368277 + 74 13541207 - TVN0376 - hypothetical protein 377 34.66 -1 368274..368801 - 175 13541208 - TVN0377 - transcription regulator 378 37.43 -1 368934..369104 - 56 13541209 - TVN0378 - transcription regulator (HTH) 379 40.65 0 369160..371058 - 632 13541210 - TVN0379 - ATPase 380 38.33 0 371051..371671 - 206 13541211 - TVN0380 - hypothetical protein 381 41.24 0 371934..372401 + 155 13541212 - TVN0381 - hypothetical protein 382 39.18 0 372394..373521 + 375 13541213 - TVN0382 - ATPase of the AAA+ class involved in cell division 383 40.69 0 373629..374267 + 212 13541214 - TVN0383 - coiled-coil domain-containing protein 384 42.07 0 374366..374674 - 102 13541215 - TVN0384 - hypothetical protein 385 40.83 0 374780..375766 + 328 13541216 - TVN0385 - homoserine dehydrogenase 386 43.30 0 375941..376753 + 270 13541217 - TVN0386 - ABC-type nitrate transporter, ATPase component 387 40.90 0 376750..378375 + 541 13541218 - TVN0387 - ABC-type nitrate transport permease 388 46.32 +1 378387..378848 - 153 13541219 - TVN0388 - hypothetical protein 389 37.76 0 378908..379201 - 97 13541220 - TVN0389 - hypothetical protein 390 40.37 0 379541..380506 + 321 13541221 - TVN0390 - dehydrogenase 391 34.78 -1 380519..380863 + 114 13541222 - TVN0391 - hypothetical protein 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.