version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 248 41.12 0 261621..262802 + 393 13541079 - TVN0248 - transposase 249 39.41 0 262873..263349 + 158 13541080 - TVN0249 - HIT (histidine triad) family protein 250 42.26 0 263385..264527 + 380 13541081 - TVN0250 - major facilitator superfamily permease 251 44.00 0 264489..265904 - 471 13541082 - TVN0251 - mercuric reductase 252 45.33 +1 265894..266118 - 74 13541083 - TVN0252 - copper chaperone 253 36.69 -1 266253..266639 + 128 13541084 - TVN0253 - hypothetical protein 254 41.57 0 266641..267720 - 359 13541085 - TVN0254 - membrane-associated Zn-dependent protease 1 255 37.94 0 268261..269367 - 368 13541086 - TVN0255 - major facilitator superfamily permease 256 41.83 0 269460..270671 + 403 13541087 - TVN0256 - multidrug efflux permease 257 42.90 0 270675..271280 - 201 13541088 - TVN0257 - phosphoglycerate mutase 258 41.04 0 271512..272783 - 423 13541089 - TVN0258 - hypothetical protein 259 43.25 0 272984..273901 + 305 13541090 - TVN0259 - carbamate kinase 260 41.90 0 273888..274541 - 217 13541091 - TVN0260 - phosphoribosyltransferase 261 41.82 0 274704..275033 - 109 13541092 - TVN0261 - NTP pyrophosphohydrolase 262 42.07 0 275700..276764 + 354 13541093 - TVN0262 - geranylgeranyl pyrophosphate synthase 263 44.13 0 276761..277612 - 283 13541094 - TVN0263 - integrase/recombinase 264 39.31 0 277703..278338 + 211 13541095 - TVN0264 - ribulose-phosphate 3-epimerase 265 43.97 0 278316..279302 - 328 13541096 - TVN0265 - alcohol dehydrogenase 266 39.48 0 279375..279911 - 178 13541097 - TVN0266 - hypothetical protein 267 44.00 0 280069..280218 + 49 13541098 rpl40e TVN0267 - 50S ribosomal protein L40e 268 43.11 0 280223..280999 + 258 13541099 - TVN0268 - phosphoribosylformylglycinamidine synthase subunit I 269 44.71 +1 280992..282239 + 415 13541100 - TVN0269 - dihydroorotase 270 41.25 0 282227..282820 - 197 13541101 - TVN0270 - RNA methylase 271 44.12 0 282820..283125 - 101 13541102 - TVN0271 - hypothetical protein 272 43.83 0 283269..284192 - 307 13541103 - TVN0272 - ornithine carbamoyltransferase 273 45.80 +1 284189..285046 - 285 13541104 - TVN0273 - succinyl-CoA synthetase subunit alpha 274 44.54 +1 285047..286144 - 365 13541105 sucC TVN0274 - succinyl-CoA synthetase subunit beta 275 30.63 -2 288250..289470 - 406 13541106 - TVN0275 - hypothetical protein 276 41.85 0 291894..292433 - 179 13541107 - TVN0276 - hypothetical protein 277 39.00 0 292522..293121 - 199 13541108 - TVN0277 - hypothetical protein 278 46.05 +1 293611..293838 + 75 13541109 - TVN0278 - hypothetical protein 279 37.36 -1 293828..294100 - 90 13541110 - TVN0279 - RNAse P protein subunit RPR2 280 38.81 0 294141..294815 + 224 13541111 - TVN0280 - phosphoglycolate phosphatase 281 43.26 0 294833..295648 - 271 13541112 - TVN0281 - solute-binding protein 282 37.29 -1 295743..296525 + 260 13541113 - TVN0282 - hypothetical protein 283 41.69 0 296872..297936 - 354 13541114 - TVN0283 - ABC-type Fe3+-siderophores transporter, permease component 284 42.34 0 298043..299008 + 321 13541115 - TVN0284 - ABC-type Fe3+-siderophores transporter, solute-binding component 285 41.28 0 299333..300628 - 431 13541116 - TVN0285 - arsenite transport permease 286 44.09 0 300659..301132 - 157 13541117 - TVN0286 - peroxiredoxin 287 39.51 0 301512..302822 - 436 13541118 - TVN0287 - adenylosuccinate synthetase 288 42.01 0 302996..303364 + 122 13541119 - TVN0288 - glycine cleavage system protein H 289 40.40 0 303361..303954 + 197 13541120 - TVN0289 - methyltransferase involved in cell division 290 37.32 -1 303941..304567 - 208 13541121 - TVN0290 - hypothetical protein 291 40.47 0 304564..305502 - 312 13541122 - TVN0291 - hypothetical protein 292 39.37 0 305692..306138 + 148 13541123 - TVN0292 - Fe2+ uptake regulation protein 293 41.26 0 306280..307212 - 310 13541124 - TVN0293 - GMP synthase subunit B 294 44.03 0 307259..307576 - 105 13541125 - TVN0294 - hypothetical protein 295 39.74 0 307586..307819 - 77 13541126 - TVN0295 - transcription regulator 296 40.48 0 307952..308581 + 209 13541127 - TVN0296 - organic radical activating protein 297 40.08 0 308639..309943 + 434 13541128 - TVN0297 - glycine dehydrogenase subunit 1 298 41.79 0 309940..311358 + 472 13541129 - TVN0298 - glycine dehydrogenase subunit 2 299 40.75 0 311426..312436 + 336 13541130 - TVN0299 - heme d1 biosynthesis protein (NirJ-related) 300 37.67 0 312896..313402 + 168 13541131 - TVN0300 - hypothetical protein 301 38.15 0 313409..314239 - 276 13541132 - TVN0301 - metal-dependent hydrolase 302 40.33 0 314249..315463 - 404 13541133 - TVN0302 - hypothetical protein 303 41.13 0 315520..316917 - 465 13541134 - TVN0303 - phosphate ABC transporter permease 304 42.17 0 317051..317752 + 233 13541135 - TVN0304 - proteasome subunit alpha 305 41.85 0 317790..318482 + 230 13541136 - TVN0305 - putative RNA-associated protein 306 45.29 +1 318533..319243 + 236 13541137 - TVN0306 - exosome complex RNA-binding protein Rrp4 307 42.70 0 319203..319949 + 248 13541138 - TVN0307 - exosome complex exonuclease Rrp41 308 43.93 0 319952..320734 + 260 13541139 - TVN0308 - exosome complex RNA-binding protein Rrp42 309 46.50 +1 320740..320982 + 80 13541140 rpl37ae TVN0309 - 50S ribosomal protein L37Ae 310 39.86 0 320979..321116 + 45 13541141 - TVN0310 - DNA-directed RNA polymerase subunit P 311 39.85 0 321120..322286 + 388 13541142 - TVN0311 - pseudouridylate synthase 312 44.44 +1 322289..322585 + 98 13541143 - TVN0312 - 50S ribosomal protein L21e 313 35.58 -1 322589..322900 + 103 13541144 - TVN0313 - hypothetical protein 314 41.17 0 322914..323462 + 182 13541145 - TVN0314 - RNA-binding protein 315 38.80 0 323459..324172 + 237 13541146 - TVN0315 - rRNA dimethyladenosine transferase 316 42.55 0 324117..324941 - 274 13541147 - TVN0316 - membrane protease subunit 317 35.06 -1 326039..326443 + 134 13541148 - TVN0317 - transcription regulator 318 35.42 -1 326520..326903 + 127 13541149 - TVN0318 - hypothetical protein 319 42.26 0 326994..327161 + 55 13541150 - TVN0319 - preprotein translocase subunit SecG 320 40.08 0 327166..328128 - 320 13541151 - TVN0320 - mevalonate pyrophosphate decarboxylase 321 37.48 0 328339..329157 + 272 13541152 - TVN0321 - hypothetical protein 322 38.50 0 329566..331095 + 509 13541153 - TVN0322 - membrane-associated Zn-dependent protease 1 323 44.12 0 331403..331810 + 135 13541154 - TVN0323 - hypothetical protein 324 42.77 0 332231..333226 + 331 13541155 rpl3p TVN0324 - 50S ribosomal protein L3P 325 43.10 0 333223..333990 + 255 13541156 rpl4lp TVN0325 - 50S ribosomal protein L4P 326 39.68 0 333990..334241 + 83 13541157 rplW TVN0326 - 50S ribosomal protein L23 327 45.96 +1 334250..334954 + 234 13541158 rpl2p TVN0327 - 50S ribosomal protein L2P 328 41.01 0 334941..335396 + 151 13541159 rps19p TVN0328 - 30S ribosomal protein S19P 329 42.54 0 335393..335848 + 151 13541160 rpl22p TVN0329 - 50S ribosomal protein L22P 330 41.74 0 335845..336522 + 225 13541161 rps3p TVN0330 - 30S ribosomal protein S3P 331 45.27 +1 336449..336649 + 66 13541162 rpmC TVN0331 - 50S ribosomal protein L29 332 41.58 0 336650..336952 + 100 13541163 - TVN0332 - translation initiation factor Sui1 333 39.26 0 336949..337218 + 89 13541164 - TVN0333 - ribonuclease P protein component 1 334 44.55 +1 337220..337549 + 109 13541165 rps17p TVN0334 - 30S ribosomal protein S17P 335 46.62 +1 337546..337944 + 132 13541166 rpl14p TVN0335 - 50S ribosomal protein L14P 336 39.27 0 337953..338390 + 145 13541167 rpl24p TVN0336 - 50S ribosomal protein L24P 337 43.08 0 338380..339087 + 235 13541168 - TVN0337 - 30S ribosomal protein S4e 338 40.94 0 339084..339596 + 170 13541169 rpl5p TVN0338 - 50S ribosomal protein L5P 339 44.44 +1 339601..339762 + 53 13541170 rps14P TVN0339 - 30S ribosomal protein S14P 340 37.69 0 339772..340161 + 129 13541171 rps8p TVN0340 - 30S ribosomal protein S8P 341 40.41 0 340175..340711 + 178 13541172 rpl6p TVN0341 - 50S ribosomal protein L6P 342 42.12 0 340713..341099 + 128 13541173 rpl32e TVN0342 - 50S ribosomal protein L32e 343 41.33 0 341109..341558 + 149 13541174 rpl19e TVN0343 - 50S ribosomal protein L19e 344 41.82 0 341564..342046 + 160 13541175 rpl18p TVN0344 - 50S ribosomal protein L18P 345 44.14 0 342043..342708 + 221 13541176 rps5p TVN0345 - 30S ribosomal protein S5P 346 41.16 0 342686..343183 + 165 13541177 rpl30p TVN0346 - 50S ribosomal protein L30P 347 41.78 0 343164..343601 + 145 13541178 rpl15p TVN0347 - 50S ribosomal protein L15P 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.