version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 218 40.60 0 226399..227999 - 533 13541049 - TVN0218 - amino acid transporter 219 42.54 0 228061..229287 - 408 13541050 - TVN0219 - multidrug efflux permease 220 37.92 0 229397..229963 - 188 13541051 - TVN0220 - hypothetical protein 221 41.54 0 230102..230905 + 267 13541052 - TVN0221 - Signal peptidase I 222 46.86 +1 230902..231426 - 174 13541053 - TVN0222 - peroxiredoxin 223 41.12 0 231588..232268 + 226 13541054 - TVN0223 - cell wall biosynthesis glycosyltransferase 224 41.96 0 232273..233466 - 397 13541055 - TVN0224 - major facilitator superfamily permease 225 40.00 0 233580..233939 + 119 13541056 - TVN0225 - hypothetical protein 226 41.84 0 233936..235228 - 430 13541057 - TVN0226 - major facilitator superfamily permease 227 38.43 0 235331..238018 - 895 13541058 - TVN0227 - chromosome segregation protein 228 43.72 0 238008..239114 - 368 13541059 - TVN0228 - DNA repair exonuclease 229 42.39 0 239138..240694 - 518 13541060 - TVN0229 - ATPase 230 40.28 0 240654..241661 - 335 13541061 - TVN0230 - hypothetical protein 231 43.06 0 241856..242719 + 287 13541062 - TVN0231 - 3-hydroxyisobutyrate dehydrogenase 232 42.88 0 242725..244368 + 547 13541063 - TVN0232 - NADH:flavin oxidoreductase 233 38.56 0 245034..245435 - 133 13541064 - TVN0233 - hypothetical protein 234 42.02 0 245889..246671 - 260 13541065 - TVN0234 - Zn-ribbon domain-containing protein 235 44.83 +1 246963..247223 - 86 13541066 - TVN0235 - hypothetical protein 236 40.34 0 247285..247983 + 232 13541067 - TVN0236 - DNA-binding protein 237 40.54 0 248059..251055 + 998 13541068 - TVN0237 - thermopsin 238 36.86 -1 251088..251597 - 169 13541069 - TVN0238 - hypothetical protein 239 42.38 0 251796..252956 + 386 13541070 - TVN0239 - methylcitrate synthase 240 41.51 0 252968..253285 - 105 13541071 - TVN0240 - hypothetical protein 241 47.80 +2 253583..253969 - 128 13541072 - TVN0241 - hypothetical protein 242 47.78 +2 253982..254161 - 59 13541073 - TVN0242 - hypothetical protein 243 45.99 +1 254542..257496 + 984 13541074 - TVN0243 - hypothetical protein 244 39.00 0 257661..257960 + 99 13541075 - TVN0244 - hypothetical protein 245 42.86 0 257957..258796 + 279 13541076 - TVN0245 - hypothetical protein 246 41.05 0 258863..260158 + 431 13541077 - TVN0246 - major facilitator superfamily permease 247 39.53 0 260458..261216 - 252 13541078 - TVN0247 - SAM-dependent methyltransferase 248 41.12 0 261621..262802 + 393 13541079 - TVN0248 - transposase 249 39.41 0 262873..263349 + 158 13541080 - TVN0249 - HIT (histidine triad) family protein 250 42.26 0 263385..264527 + 380 13541081 - TVN0250 - major facilitator superfamily permease 251 44.00 0 264489..265904 - 471 13541082 - TVN0251 - mercuric reductase 252 45.33 +1 265894..266118 - 74 13541083 - TVN0252 - copper chaperone 253 36.69 -1 266253..266639 + 128 13541084 - TVN0253 - hypothetical protein 254 41.57 0 266641..267720 - 359 13541085 - TVN0254 - membrane-associated Zn-dependent protease 1 255 37.94 0 268261..269367 - 368 13541086 - TVN0255 - major facilitator superfamily permease 256 41.83 0 269460..270671 + 403 13541087 - TVN0256 - multidrug efflux permease 257 42.90 0 270675..271280 - 201 13541088 - TVN0257 - phosphoglycerate mutase 258 41.04 0 271512..272783 - 423 13541089 - TVN0258 - hypothetical protein 259 43.25 0 272984..273901 + 305 13541090 - TVN0259 - carbamate kinase 260 41.90 0 273888..274541 - 217 13541091 - TVN0260 - phosphoribosyltransferase 261 41.82 0 274704..275033 - 109 13541092 - TVN0261 - NTP pyrophosphohydrolase 262 42.07 0 275700..276764 + 354 13541093 - TVN0262 - geranylgeranyl pyrophosphate synthase 263 44.13 0 276761..277612 - 283 13541094 - TVN0263 - integrase/recombinase 264 39.31 0 277703..278338 + 211 13541095 - TVN0264 - ribulose-phosphate 3-epimerase 265 43.97 0 278316..279302 - 328 13541096 - TVN0265 - alcohol dehydrogenase 266 39.48 0 279375..279911 - 178 13541097 - TVN0266 - hypothetical protein 267 44.00 0 280069..280218 + 49 13541098 rpl40e TVN0267 - 50S ribosomal protein L40e 268 43.11 0 280223..280999 + 258 13541099 - TVN0268 - phosphoribosylformylglycinamidine synthase subunit I 269 44.71 +1 280992..282239 + 415 13541100 - TVN0269 - dihydroorotase 270 41.25 0 282227..282820 - 197 13541101 - TVN0270 - RNA methylase 271 44.12 0 282820..283125 - 101 13541102 - TVN0271 - hypothetical protein 272 43.83 0 283269..284192 - 307 13541103 - TVN0272 - ornithine carbamoyltransferase 273 45.80 +1 284189..285046 - 285 13541104 - TVN0273 - succinyl-CoA synthetase subunit alpha 274 44.54 +1 285047..286144 - 365 13541105 sucC TVN0274 - succinyl-CoA synthetase subunit beta 275 30.63 -2 288250..289470 - 406 13541106 - TVN0275 - hypothetical protein 276 41.85 0 291894..292433 - 179 13541107 - TVN0276 - hypothetical protein 277 39.00 0 292522..293121 - 199 13541108 - TVN0277 - hypothetical protein 278 46.05 +1 293611..293838 + 75 13541109 - TVN0278 - hypothetical protein 279 37.36 -1 293828..294100 - 90 13541110 - TVN0279 - RNAse P protein subunit RPR2 280 38.81 0 294141..294815 + 224 13541111 - TVN0280 - phosphoglycolate phosphatase 281 43.26 0 294833..295648 - 271 13541112 - TVN0281 - solute-binding protein 282 37.29 -1 295743..296525 + 260 13541113 - TVN0282 - hypothetical protein 283 41.69 0 296872..297936 - 354 13541114 - TVN0283 - ABC-type Fe3+-siderophores transporter, permease component 284 42.34 0 298043..299008 + 321 13541115 - TVN0284 - ABC-type Fe3+-siderophores transporter, solute-binding component 285 41.28 0 299333..300628 - 431 13541116 - TVN0285 - arsenite transport permease 286 44.09 0 300659..301132 - 157 13541117 - TVN0286 - peroxiredoxin 287 39.51 0 301512..302822 - 436 13541118 - TVN0287 - adenylosuccinate synthetase 288 42.01 0 302996..303364 + 122 13541119 - TVN0288 - glycine cleavage system protein H 289 40.40 0 303361..303954 + 197 13541120 - TVN0289 - methyltransferase involved in cell division 290 37.32 -1 303941..304567 - 208 13541121 - TVN0290 - hypothetical protein 291 40.47 0 304564..305502 - 312 13541122 - TVN0291 - hypothetical protein 292 39.37 0 305692..306138 + 148 13541123 - TVN0292 - Fe2+ uptake regulation protein 293 41.26 0 306280..307212 - 310 13541124 - TVN0293 - GMP synthase subunit B 294 44.03 0 307259..307576 - 105 13541125 - TVN0294 - hypothetical protein 295 39.74 0 307586..307819 - 77 13541126 - TVN0295 - transcription regulator 296 40.48 0 307952..308581 + 209 13541127 - TVN0296 - organic radical activating protein 297 40.08 0 308639..309943 + 434 13541128 - TVN0297 - glycine dehydrogenase subunit 1 298 41.79 0 309940..311358 + 472 13541129 - TVN0298 - glycine dehydrogenase subunit 2 299 40.75 0 311426..312436 + 336 13541130 - TVN0299 - heme d1 biosynthesis protein (NirJ-related) 300 37.67 0 312896..313402 + 168 13541131 - TVN0300 - hypothetical protein 301 38.15 0 313409..314239 - 276 13541132 - TVN0301 - metal-dependent hydrolase 302 40.33 0 314249..315463 - 404 13541133 - TVN0302 - hypothetical protein 303 41.13 0 315520..316917 - 465 13541134 - TVN0303 - phosphate ABC transporter permease 304 42.17 0 317051..317752 + 233 13541135 - TVN0304 - proteasome subunit alpha 305 41.85 0 317790..318482 + 230 13541136 - TVN0305 - putative RNA-associated protein 306 45.29 +1 318533..319243 + 236 13541137 - TVN0306 - exosome complex RNA-binding protein Rrp4 307 42.70 0 319203..319949 + 248 13541138 - TVN0307 - exosome complex exonuclease Rrp41 308 43.93 0 319952..320734 + 260 13541139 - TVN0308 - exosome complex RNA-binding protein Rrp42 309 46.50 +1 320740..320982 + 80 13541140 rpl37ae TVN0309 - 50S ribosomal protein L37Ae 310 39.86 0 320979..321116 + 45 13541141 - TVN0310 - DNA-directed RNA polymerase subunit P 311 39.85 0 321120..322286 + 388 13541142 - TVN0311 - pseudouridylate synthase 312 44.44 +1 322289..322585 + 98 13541143 - TVN0312 - 50S ribosomal protein L21e 313 35.58 -1 322589..322900 + 103 13541144 - TVN0313 - hypothetical protein 314 41.17 0 322914..323462 + 182 13541145 - TVN0314 - RNA-binding protein 315 38.80 0 323459..324172 + 237 13541146 - TVN0315 - rRNA dimethyladenosine transferase 316 42.55 0 324117..324941 - 274 13541147 - TVN0316 - membrane protease subunit 317 35.06 -1 326039..326443 + 134 13541148 - TVN0317 - transcription regulator 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.