version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1122 37.04 -1 1173264..1176557 + 1097 13541953 - TVN1122 - serine protease 1123 38.55 0 1176554..1177588 - 344 13541954 - TVN1123 - methionine synthase 1124 37.41 -1 1177590..1178471 - 293 13541955 - TVN1124 - hypothetical protein 1125 39.27 0 1178481..1179272 - 263 13541956 - TVN1125 - 5,10-methylenetetrahydrofolate reductase 1126 34.98 -1 1179340..1179765 + 141 13541957 - TVN1126 - hypothetical protein 1127 35.05 -1 1179749..1180156 - 135 13541958 - TVN1127 - transcription regulator 1128 46.52 +1 1180337..1181974 + 545 13541959 - TVN1128 - chaperonin GroEL 1129 42.37 0 1182043..1183005 + 320 13541960 - TVN1129 - thioredoxin reductase 1130 41.67 0 1183365..1184036 + 223 13541961 - TVN1130 - threonine dehydratase 1131 40.88 0 1184142..1184459 + 105 13541962 - TVN1131 - hypothetical protein 1132 38.52 0 1184913..1185779 + 288 13541963 - TVN1132 - protoheme IX farnesyltransferase 1133 36.69 -1 1185824..1186360 + 178 13541964 - TVN1133 - hypothetical protein 1134 41.73 0 1186695..1187063 + 122 13541965 - TVN1134 - 50S ribosomal protein L18e 1135 38.44 0 1187069..1187479 + 136 13541966 rpl13p TVN1135 - 50S ribosomal protein L13P 1136 41.85 0 1187481..1187879 + 132 13541967 rps9p TVN1136 - 30S ribosomal protein S9P 1137 40.64 0 1187885..1188103 + 72 13541968 - TVN1137 - DNA-directed RNA polymerase subunit N 1138 41.08 0 1189091..1190485 + 464 13541969 - TVN1138 - hypothetical protein 1139 40.95 0 1190495..1191334 - 279 13541970 - TVN1139 - pyrroline-5-carboxylate reductase 1140 39.19 0 1191381..1191875 - 164 13541971 - TVN1140 - hypothetical protein 1141 41.42 0 1192129..1193625 - 498 13541972 - TVN1141 - glycerol kinase 1142 37.34 -1 1193765..1194688 + 307 13541973 - TVN1142 - hypothetical protein 1143 41.72 0 1194876..1196198 + 440 13541974 - TVN1143 - sugar-binding protein 1144 37.31 -1 1196202..1197131 + 309 13541975 - TVN1144 - ABC-type sugar transporter, permease component 1145 40.09 0 1197134..1198021 + 295 13541976 - TVN1145 - sugar permease 1146 41.04 0 1198028..1199143 + 371 13541977 - TVN1146 - ABC-type sugar transporter, ATPase component 1147 40.68 0 1199109..1201040 + 643 13541978 - TVN1147 - glycogen debranching protein 1148 38.74 0 1201046..1202803 + 585 13541979 - TVN1148 - glycogen debranching protein 1149 40.13 0 1202787..1203845 - 352 13541980 - TVN1149 - transcription regulator 1150 43.22 0 1204140..1206092 + 650 13541981 - TVN1150 - Acyl-coenzyme A synthetase 1151 43.79 0 1206089..1206700 + 203 13541982 - TVN1151 - hypothetical protein 1152 41.18 0 1206711..1207577 - 288 13541983 - TVN1152 - aldo/keto reductase 1153 43.21 0 1207583..1208473 - 296 13541984 - TVN1153 - hypothetical protein 1154 38.10 0 1208678..1208887 - 69 13541985 - TVN1154 - hypothetical protein 1155 42.07 0 1209022..1210005 + 327 13541986 - TVN1155 - permease 1156 38.85 0 1210002..1210382 + 126 13541987 - TVN1156 - hypothetical protein 1157 44.95 +1 1210440..1211894 + 484 13541988 - TVN1157 - putative oxidoreductase 1158 45.62 +1 1212110..1213330 + 406 13541989 - TVN1158 - cofactor-independent phosphoglycerate mutase 1159 42.54 0 1213430..1213972 + 180 13541990 - TVN1159 - hypothetical protein 1160 44.10 0 1213986..1215350 - 454 13541991 - TVN1160 - proline/betaine transport permease 1161 41.92 0 1215416..1216615 - 399 13541992 - TVN1161 - carnitine dehydratase 1162 40.28 0 1216673..1217104 - 143 13541993 - TVN1162 - transcription regulator (SlyA-related) 1163 44.90 +1 1217101..1218864 - 587 13541994 - TVN1163 - multidrug efflux permease 1164 34.70 -1 1218962..1219474 + 170 13541995 - TVN1164 - hypothetical protein 1165 39.14 0 1219531..1219926 + 131 13541996 - TVN1165 - hypothetical protein 1166 38.79 0 1219960..1220490 - 176 13541997 - TVN1166 - secreted endonuclease distantly related to Holliday junction resolvase 1167 40.14 0 1220593..1221180 + 195 13541998 - TVN1167 - alpha/beta superfamily hydrolase 1168 44.44 +1 1221182..1222441 - 419 13541999 - TVN1168 - hydroxymethylglutaryl-CoA reductase 1169 40.16 0 1222485..1223699 - 404 13542000 - TVN1169 - multidrug efflux permease 1170 42.27 0 1223864..1224769 + 301 13542001 - TVN1170 - dihydroorotate dehydrogenase 1B 1171 41.97 0 1224766..1225518 + 250 13542002 - TVN1171 - dihydroorotate dehydrogenase electron transfer subunit 1172 37.45 0 1225570..1228122 + 850 13542003 - TVN1172 - TPR repeat-containing protein 1173 38.18 0 1228061..1228927 - 288 13542004 - TVN1173 - hypothetical protein 1174 41.50 0 1228987..1229292 - 101 13542005 - TVN1174 - hypothetical protein 1175 42.88 0 1230030..1231223 + 397 13542006 - TVN1175 - Acyl-CoA dehydrogenase 1176 40.89 0 1231330..1231911 + 193 13542007 - TVN1176 - putative RNA-processing protein 1177 37.83 0 1232029..1232784 - 251 13542008 - TVN1177 - serine/threonine protein kinase 1178 41.13 0 1232812..1233183 - 123 13542009 - TVN1178 - translation initiation factor IF-1A 1179 37.76 0 1233261..1233689 - 142 13542010 nusA TVN1179 - transcription elongation factor NusA-like protein 1180 42.67 0 1233699..1235240 - 513 13542011 - TVN1180 - DNA-directed RNA polymerase subunit A'' 1181 44.19 0 1235237..1237897 - 886 13542012 - TVN1181 - DNA-directed RNA polymerase subunit alpha 1182 45.43 +1 1237894..1241481 - 1195 13542013 - TVN1182 - DNA-directed RNA polymerase subunit beta 1183 38.26 0 1241478..1241741 - 87 13542014 rpoH TVN1183 - DNA-directed RNA polymerase subunit H 1184 40.56 0 1241900..1242715 - 271 13542015 - TVN1184 - hypothetical protein 1185 40.48 0 1242712..1243788 - 358 13542016 - TVN1185 - replication factor A 1186 34.62 -1 1243935..1244633 + 232 13542017 - TVN1186 - transcription regulator 1187 40.86 0 1244656..1245837 - 393 13542018 - TVN1187 - transposase 1188 28.09 -2 1245857..1246180 - 107 13542019 - TVN1188 - transcription regulator 1189 38.63 0 1246465..1246974 - 169 13542020 - TVN1189 - inorganic pyrophosphatase 1190 38.58 0 1247214..1247804 - 196 13542021 - TVN1190 - ATP:corrinoid adenosyltransferase 1191 35.28 -1 1247883..1248551 + 222 13542022 - TVN1191 - ribosome biogenesis protein 1192 28.12 -2 1248764..1249051 - 95 13542023 - TVN1192 - hypothetical protein 1193 35.40 -1 1249252..1249542 - 96 13542024 - TVN1193 - hypothetical protein 1194 38.65 0 1250055..1251221 - 388 13542025 - TVN1194 - galactonate dehydratase 1195 41.74 0 1252494..1253183 + 229 13542026 - TVN1195 - serine/threonine protein phosphatase 1196 38.39 0 1253697..1254131 + 144 13542027 - TVN1196 - transcription regulator 1197 40.73 0 1255890..1257431 - 513 13542028 - TVN1197 - benzoylformate decarboxylase 1198 40.75 0 1257432..1258361 - 309 13542029 - TVN1198 - 2-hydroxyacid dehydrogenase 1199 38.43 0 1258483..1258953 + 156 13542030 - TVN1199 - hypothetical protein 1200 42.14 0 1258977..1261565 + 862 13542031 - TVN1200 - penicillin amidase related protein 1201 41.37 0 1261595..1261930 + 111 13542032 - TVN1201 - hypothetical protein 1202 36.49 -1 1262323..1262670 - 115 13542033 - TVN1202 - hypothetical protein 1203 36.51 -1 1262718..1263221 - 167 13542034 - TVN1203 - hypothetical protein 1204 39.73 0 1263637..1265169 + 510 13542035 - TVN1204 - TPR repeat-containing protein 1205 38.89 0 1265213..1266004 + 263 13542036 - TVN1205 - hypothetical protein 1206 41.99 0 1266214..1267449 + 411 13542037 - TVN1206 - NAD(FAD)-dependent dehydrogenase 1207 34.02 -1 1267452..1267742 + 96 13542038 - TVN1207 - hypothetical protein 1208 38.13 0 1267907..1268344 + 145 13542039 rps15p TVN1208 - 30S ribosomal protein S15P 1209 40.39 0 1268341..1269687 + 448 13542040 - TVN1209 - single-stranded DNA-specific exonuclease 1210 37.88 0 1269764..1270423 + 219 13542041 - TVN1210 - hypothetical protein 1211 38.97 0 1270428..1271207 - 259 13542042 - TVN1211 - hypothetical protein 1212 38.65 0 1271204..1277434 - 2076 13542043 - TVN1212 - hypothetical protein 1213 34.93 -1 1277788..1278162 + 124 13542044 - TVN1213 - prefoldin subunit beta 1214 38.13 0 1278159..1279013 + 284 13542045 - TVN1214 - GTP cyclohydrolase 1215 38.00 0 1279046..1279474 - 142 13542046 - TVN1215 - cytidylyltransferase 1216 36.42 -1 1279532..1279984 + 150 13542047 - TVN1216 - acetyltransferase 1217 40.79 0 1280038..1280493 + 151 13542048 - TVN1217 - HIT (histidine triad) family protein 1218 40.70 0 1280648..1281244 + 198 13542049 - TVN1218 - orotate phosphoribosyltransferase 1219 40.87 0 1281403..1282914 + 503 13542050 lysK TVN1219 - lysyl-tRNA synthetase 1220 38.97 0 1282981..1284612 + 543 13542051 - TVN1220 - methionyl-tRNA synthetase 1221 40.52 0 1284768..1285073 + 101 13542052 - TVN1221 - cationic amino acid transporter 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.