version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1070 40.08 0 1128771..1129511 - 246 13541901 truA TVN1070 - tRNA pseudouridine synthase A 1071 42.58 0 1129508..1130524 - 338 13541902 - TVN1071 - tRNA 2'-O-methylase 1072 40.04 0 1130521..1131027 - 168 13541903 - TVN1072 - hypothetical protein 1073 38.89 0 1131371..1131532 - 53 13541904 - TVN1073 - hypothetical protein 1074 37.91 0 1131795..1132799 + 334 13541905 - TVN1074 - methyltransferase 1075 40.74 0 1133061..1133276 - 71 13541906 - TVN1075 - small nuclear ribonucleoprotein (snRNP)-like protein 1076 33.33 -2 1133289..1133450 - 53 13541907 - TVN1076 - hypothetical protein 1077 41.05 0 1133467..1134075 - 202 13541908 - TVN1077 - exosome complex RNA-binding protein Csl4 1078 38.61 0 1134366..1135520 + 384 13541909 - TVN1078 - major facilitator superfamily permease 1079 42.07 0 1135544..1136722 - 392 13541910 - TVN1079 - succinyl-diaminopimelate desuccinylase 1080 39.66 0 1136823..1137407 + 194 13541911 - TVN1080 - hypothetical protein 1081 40.68 0 1137473..1138861 + 462 13541912 - TVN1081 - prolyl-tRNA synthetase 1082 38.81 0 1138861..1139499 + 212 13541913 - TVN1082 - phosphoserine phosphatase 1083 43.45 0 1139885..1140823 - 312 13541914 tfb TVN1083 - transcription initiation factor IIB 1084 39.61 0 1140833..1141039 - 68 13541915 - TVN1084 - H/ACA RNA-protein complex component Gar1 1085 36.50 -1 1141285..1142262 + 325 13541916 - TVN1085 - GTPase 1086 41.53 0 1142243..1143889 + 548 13541917 gltX TVN1086 - glutamyl-tRNA synthetase 1087 34.12 -1 1143890..1144144 - 84 13541918 - TVN1087 - hypothetical protein 1088 43.02 0 1144148..1144756 - 202 13541919 - TVN1088 - GMP synthase subunit A 1089 43.84 0 1144753..1145694 - 313 13541920 tfb TVN1089 - transcription initiation factor IIB 1090 39.16 0 1146079..1147365 + 428 13541921 aspC TVN1090 - aspartyl-tRNA synthetase 1091 38.10 0 1147653..1148597 + 314 13541922 - TVN1091 - 3-hydroxyacyl-CoA dehydrogenase 1092 42.36 0 1148602..1148889 - 95 13541923 - TVN1092 - hypothetical protein 1093 39.81 0 1149034..1149465 - 143 13541924 - TVN1093 - transcription factor 1094 40.51 0 1149537..1150205 + 222 13541925 - TVN1094 - fibrillarin 1095 40.83 0 1150252..1150731 + 159 13541926 - TVN1095 - 6-pyruvoyl-tetrahydropterin synthase 1096 40.77 0 1150733..1151458 + 241 13541927 - TVN1096 - ATPase 1097 43.25 0 1151701..1152678 - 325 13541928 - TVN1097 - malate dehydrogenase 1098 39.08 0 1152945..1154372 + 475 13541929 - TVN1098 - ATPase 1099 42.48 0 1154375..1154986 - 203 13541930 - TVN1099 - putative peroxiredoxin 1100 43.17 0 1155064..1156029 - 321 13541931 - TVN1100 - delta-aminolevulinic acid dehydratase 1101 38.14 0 1156112..1156444 + 110 13541932 - TVN1101 - hypothetical protein 1102 38.62 0 1156448..1156693 - 81 13541933 - TVN1102 - hypothetical protein 1103 39.64 0 1156690..1157022 - 110 13541934 - TVN1103 - hypothetical protein 1104 39.45 0 1157047..1158468 - 473 13541935 - TVN1104 - NADH dehydrogenase subunit N 1105 40.17 0 1158465..1160015 - 516 13541936 - TVN1105 - NADH dehydrogenase subunit M 1106 42.90 0 1160017..1161072 - 351 13541937 - TVN1106 - NADH:ubiquinone oxidoreductase subunit 5 (chain L) 1107 42.74 0 1161017..1162015 - 332 13541938 - TVN1107 - NADH:ubiquinone oxidoreductase subunit 5 (chain L) 1108 39.10 0 1162018..1162329 - 103 13541939 - TVN1108 - NADH dehydrogenase subunit K 1109 38.81 0 1162330..1162548 - 72 13541940 - TVN1109 - NADH dehydrogenase subunit J 1110 34.94 -1 1162541..1162789 - 82 13541941 - TVN1110 - NADH dehydrogenase subunit J 1111 39.57 0 1162786..1163250 - 154 13541942 - TVN1111 - NADH dehydrogenase subunit I 1112 38.90 0 1163214..1164254 - 346 13541943 - TVN1112 - NADH dehydrogenase subunit H 1113 43.03 0 1164251..1165354 - 367 13541944 - TVN1113 - NADH dehydrogenase subunit D 1114 42.76 0 1165354..1165809 - 151 13541945 - TVN1114 - NADH dehydrogenase subunit C 1115 44.09 0 1165809..1166282 - 157 13541946 - TVN1115 - NADH dehydrogenase subunit B 1116 40.13 0 1166270..1166725 - 151 13541947 - TVN1116 - NADH dehydrogenase subunit A 1117 39.57 0 1166951..1168747 - 598 13541948 - TVN1117 - glutamyl-tRNA(Gln) amidotransferase subunit E 1118 39.89 0 1168744..1169964 - 406 13541949 - TVN1118 - glutamyl-tRNA(Gln) amidotransferase subunit D 1119 37.21 -1 1170047..1170820 + 257 13541950 - TVN1119 - hypothetical protein 1120 42.60 0 1170798..1171952 - 384 13541951 - TVN1120 - Acyl-CoA dehydrogenase 1121 38.64 0 1172230..1173228 - 332 13541952 - TVN1121 - DNA primase small subunit 1122 37.04 -1 1173264..1176557 + 1097 13541953 - TVN1122 - serine protease 1123 38.55 0 1176554..1177588 - 344 13541954 - TVN1123 - methionine synthase 1124 37.41 -1 1177590..1178471 - 293 13541955 - TVN1124 - hypothetical protein 1125 39.27 0 1178481..1179272 - 263 13541956 - TVN1125 - 5,10-methylenetetrahydrofolate reductase 1126 34.98 -1 1179340..1179765 + 141 13541957 - TVN1126 - hypothetical protein 1127 35.05 -1 1179749..1180156 - 135 13541958 - TVN1127 - transcription regulator 1128 46.52 +1 1180337..1181974 + 545 13541959 - TVN1128 - chaperonin GroEL 1129 42.37 0 1182043..1183005 + 320 13541960 - TVN1129 - thioredoxin reductase 1130 41.67 0 1183365..1184036 + 223 13541961 - TVN1130 - threonine dehydratase 1131 40.88 0 1184142..1184459 + 105 13541962 - TVN1131 - hypothetical protein 1132 38.52 0 1184913..1185779 + 288 13541963 - TVN1132 - protoheme IX farnesyltransferase 1133 36.69 -1 1185824..1186360 + 178 13541964 - TVN1133 - hypothetical protein 1134 41.73 0 1186695..1187063 + 122 13541965 - TVN1134 - 50S ribosomal protein L18e 1135 38.44 0 1187069..1187479 + 136 13541966 rpl13p TVN1135 - 50S ribosomal protein L13P 1136 41.85 0 1187481..1187879 + 132 13541967 rps9p TVN1136 - 30S ribosomal protein S9P 1137 40.64 0 1187885..1188103 + 72 13541968 - TVN1137 - DNA-directed RNA polymerase subunit N 1138 41.08 0 1189091..1190485 + 464 13541969 - TVN1138 - hypothetical protein 1139 40.95 0 1190495..1191334 - 279 13541970 - TVN1139 - pyrroline-5-carboxylate reductase 1140 39.19 0 1191381..1191875 - 164 13541971 - TVN1140 - hypothetical protein 1141 41.42 0 1192129..1193625 - 498 13541972 - TVN1141 - glycerol kinase 1142 37.34 -1 1193765..1194688 + 307 13541973 - TVN1142 - hypothetical protein 1143 41.72 0 1194876..1196198 + 440 13541974 - TVN1143 - sugar-binding protein 1144 37.31 -1 1196202..1197131 + 309 13541975 - TVN1144 - ABC-type sugar transporter, permease component 1145 40.09 0 1197134..1198021 + 295 13541976 - TVN1145 - sugar permease 1146 41.04 0 1198028..1199143 + 371 13541977 - TVN1146 - ABC-type sugar transporter, ATPase component 1147 40.68 0 1199109..1201040 + 643 13541978 - TVN1147 - glycogen debranching protein 1148 38.74 0 1201046..1202803 + 585 13541979 - TVN1148 - glycogen debranching protein 1149 40.13 0 1202787..1203845 - 352 13541980 - TVN1149 - transcription regulator 1150 43.22 0 1204140..1206092 + 650 13541981 - TVN1150 - Acyl-coenzyme A synthetase 1151 43.79 0 1206089..1206700 + 203 13541982 - TVN1151 - hypothetical protein 1152 41.18 0 1206711..1207577 - 288 13541983 - TVN1152 - aldo/keto reductase 1153 43.21 0 1207583..1208473 - 296 13541984 - TVN1153 - hypothetical protein 1154 38.10 0 1208678..1208887 - 69 13541985 - TVN1154 - hypothetical protein 1155 42.07 0 1209022..1210005 + 327 13541986 - TVN1155 - permease 1156 38.85 0 1210002..1210382 + 126 13541987 - TVN1156 - hypothetical protein 1157 44.95 +1 1210440..1211894 + 484 13541988 - TVN1157 - putative oxidoreductase 1158 45.62 +1 1212110..1213330 + 406 13541989 - TVN1158 - cofactor-independent phosphoglycerate mutase 1159 42.54 0 1213430..1213972 + 180 13541990 - TVN1159 - hypothetical protein 1160 44.10 0 1213986..1215350 - 454 13541991 - TVN1160 - proline/betaine transport permease 1161 41.92 0 1215416..1216615 - 399 13541992 - TVN1161 - carnitine dehydratase 1162 40.28 0 1216673..1217104 - 143 13541993 - TVN1162 - transcription regulator (SlyA-related) 1163 44.90 +1 1217101..1218864 - 587 13541994 - TVN1163 - multidrug efflux permease 1164 34.70 -1 1218962..1219474 + 170 13541995 - TVN1164 - hypothetical protein 1165 39.14 0 1219531..1219926 + 131 13541996 - TVN1165 - hypothetical protein 1166 38.79 0 1219960..1220490 - 176 13541997 - TVN1166 - secreted endonuclease distantly related to Holliday junction resolvase 1167 40.14 0 1220593..1221180 + 195 13541998 - TVN1167 - alpha/beta superfamily hydrolase 1168 44.44 +1 1221182..1222441 - 419 13541999 - TVN1168 - hydroxymethylglutaryl-CoA reductase 1169 40.16 0 1222485..1223699 - 404 13542000 - TVN1169 - multidrug efflux permease 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.