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Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 943 48.62 0 982252..983487 + 411 148270088 - Tpet_0954 - extracellular solute-binding protein 944 46.94 0 983545..984426 + 293 148270089 - Tpet_0955 - binding-protein-dependent transport systems inner membrane component 945 46.24 0 984439..985275 + 278 148270090 - Tpet_0956 - binding-protein-dependent transport systems inner membrane component 946 44.73 0 985354..986502 + 382 148270091 - Tpet_0957 - ROK family protein 947 43.78 0 986523..988265 - 580 148270092 - Tpet_0958 - WD-40 repeat-containing protein 948 46.33 0 988342..990873 - 843 148270093 - Tpet_0959 - pullulanase, type I 949 45.78 0 990891..992915 - 674 148270094 - Tpet_0960 - glycoside hydrolase family 13 protein 950 45.67 0 992931..994073 - 380 148270095 - Tpet_0961 - hypothetical protein 951 47.51 0 994084..994746 - 220 148270096 - Tpet_0962 - hypothetical protein 952 45.70 0 994751..994936 - 61 148270097 - Tpet_0963 - hypothetical protein 953 47.26 0 994989..996101 - 370 148270098 - Tpet_0964 - hypothetical protein 954 44.24 0 996114..997781 - 555 148270099 - Tpet_0965 - alpha amylase, catalytic region 955 47.92 0 998043..999221 + 392 148270100 - Tpet_0966 - extracellular solute-binding protein 956 45.67 0 999298..1001031 + 577 148270101 - Tpet_0967 - binding-protein-dependent transport systems inner membrane component 957 44.24 0 1001028..1003529 + 833 148270102 - Tpet_0968 - binding-protein-dependent transport systems inner membrane component 958 48.17 0 1003526..1004947 + 473 148270103 - Tpet_0969 - alpha amylase, catalytic region 959 48.65 0 1005082..1006524 + 480 148270104 - Tpet_0970 - glycoside hydrolase family protein 960 44.33 0 1006675..1007265 + 196 148270105 - Tpet_0971 - hypothetical protein 961 44.36 0 1007300..1007689 + 129 148270106 - Tpet_0972 - transposase IS200-family protein 962 48.06 0 1007674..1008882 + 402 148270107 - Tpet_0973 - IS605 family transposase OrfB 963 47.83 0 1008867..1009349 + 160 148270108 - Tpet_0974 - metal dependent phosphohydrolase 964 46.88 0 1009306..1010073 - 255 148270109 - Tpet_0975 - beta-lactamase domain-containing protein 965 59.60 +2 1010122..1010319 - 65 148270110 - Tpet_0976 - hypothetical protein 966 49.07 0 1010325..1010540 - 71 148270111 - Tpet_0977 - hypothetical protein 967 44.07 0 1010614..1012290 - 558 148270112 - Tpet_0978 - metal dependent phosphohydrolase 968 48.76 0 1012437..1012637 + 66 148270113 - Tpet_0979 - cold-shock DNA-binding domain-containing protein 969 46.30 0 1012759..1012974 + 71 148270114 - Tpet_0980 - ribosomal protein L31 970 43.20 0 1013008..1013382 + 124 148270115 - Tpet_0981 - RNA-binding S1 domain-containing protein 971 47.26 0 1013415..1014563 - 382 148270116 - Tpet_0982 - ErfK/YbiS/YcfS/YnhG family protein 972 47.34 0 1014526..1015710 - 394 148270117 - Tpet_0983 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 973 44.17 0 1015713..1015952 - 79 148270118 - Tpet_0984 - DNA-directed RNA polymerase, omega subunit 974 48.08 0 1015937..1016560 - 207 148270119 - Tpet_0985 - guanylate kinase 975 46.24 0 1016572..1016850 - 92 148270120 - Tpet_0986 - hypothetical protein 976 45.51 0 1016863..1017741 - 292 148270121 - Tpet_0987 - hypothetical protein 977 47.45 0 1017775..1018929 - 384 148270122 - Tpet_0988 - cysteine desulfurase 978 45.16 0 1018926..1019669 - 247 148270123 - Tpet_0989 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 979 45.95 0 1019666..1020862 - 398 148270124 - Tpet_0990 - thiamine biosynthesis/tRNA modification protein ThiI 980 44.97 0 1020931..1022004 + 357 148270125 - Tpet_0991 - TPR repeat-containing protein 981 44.81 0 1021989..1022711 + 240 148270126 - Tpet_0992 - peptidase A24A domain-containing protein 982 45.41 0 1022712..1023887 + 391 148270127 - Tpet_0993 - SAM-dependent methyltransferase-like protein 983 48.57 0 1023893..1025080 + 395 148270128 - Tpet_0994 - aspartate aminotransferase 984 45.38 0 1025118..1026761 + 547 148270129 - Tpet_0995 - metal dependent phosphohydrolase 985 43.78 0 1026748..1027350 - 200 148270130 - Tpet_0996 - HAD family hydrolase 986 48.86 0 1027478..1028791 + 437 148270131 - Tpet_0997 - MATE efflux family protein 987 44.53 0 1028803..1029186 + 127 148270132 - Tpet_0998 - hypothetical protein 988 44.73 0 1029168..1030949 - 593 148270133 - Tpet_0999 - sulfatase 989 44.62 0 1030951..1032696 - 581 148270134 - Tpet_1000 - hypothetical protein 990 45.46 0 1032693..1034201 - 502 148270135 - Tpet_1001 - lysyl-tRNA synthetase 991 46.92 0 1034215..1034685 - 156 148270136 - Tpet_1002 - transcription elongation factor GreA 992 43.95 0 1034682..1035152 - 156 148270137 - Tpet_1003 - transcriptional regulator NrdR 993 40.64 -1 1035149..1036024 - 291 148270138 - Tpet_1004 - hypothetical protein 994 47.30 0 1036030..1036974 - 314 148270139 - Tpet_1005 - protein of unknown function UPF0052 and CofD 995 45.74 0 1036978..1037823 - 281 148270140 - Tpet_1006 - hypothetical protein 996 38.95 -2 1037820..1038086 - 88 148270141 - Tpet_1007 - hypothetical protein 997 42.70 -1 1038064..1038330 - 88 148270142 - Tpet_1008 - hypothetical protein 998 46.88 0 1038351..1038926 - 191 148270143 - Tpet_1009 - hypothetical protein 999 46.07 0 1038905..1039807 - 300 148270144 - Tpet_1010 - UDP-N-acetylenolpyruvoylglucosamine reductase 1000 43.12 0 1039860..1040891 + 343 148270145 - Tpet_1011 - radical SAM protein 1001 44.88 0 1040888..1041502 + 204 148270146 - Tpet_1012 - PASTA domain-containing protein 1002 46.17 0 1041499..1042386 + 295 148270147 - Tpet_1013 - ribosome small subunit-dependent GTPase A 1003 45.55 0 1042386..1043048 + 220 148270148 - Tpet_1014 - ribulose-phosphate 3-epimerase 1004 47.36 0 1043017..1045398 - 793 148270149 - Tpet_1015 - DNA mismatch repair protein 1005 46.67 0 1045395..1045829 - 144 148270150 - Tpet_1016 - GCN5-related N-acetyltransferase 1006 46.56 0 1045894..1047072 + 392 148270151 - Tpet_1017 - hypothetical protein 1007 46.48 0 1047076..1047942 + 288 148270152 - Tpet_1018 - hypothetical protein 1008 49.53 +1 1047920..1049080 + 386 148270153 - Tpet_1019 - amidohydrolase 1009 49.80 +1 1049087..1049827 - 246 148270154 - Tpet_1020 - 3-oxoacyl-(acyl-carrier-protein) reductase 1010 45.10 0 1049917..1051038 + 373 148270155 - Tpet_1021 - threonyl/alanyl tRNA synthetase, SAD 1011 47.55 0 1051029..1051823 + 264 148270156 - Tpet_1022 - hypothetical protein 1012 50.06 +1 1051813..1052601 + 262 148270157 - Tpet_1023 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1013 49.75 +1 1052598..1053809 + 403 148270158 - Tpet_1024 - S-layer domain-containing protein 1014 50.05 +1 1053906..1054910 + 334 148270159 ruvB Tpet_1025 - Holliday junction DNA helicase B 1015 48.12 0 1054922..1055611 + 229 148270160 - Tpet_1026 - alanine racemase domain-containing protein 1016 45.79 0 1055612..1055908 + 98 148270161 - Tpet_1027 - protein of unknown function YGGT 1017 48.13 0 1055905..1056681 + 258 148270162 - Tpet_1028 - ATP-NAD/AcoX kinase 1018 46.05 0 1056678..1057385 + 235 148270163 - Tpet_1029 - phosphate uptake regulator, PhoU 1019 44.73 0 1057369..1060554 + 1061 148270164 - Tpet_1030 - permease YjgP/YjgQ family protein 1020 47.94 0 1060566..1061921 + 451 148270165 - Tpet_1031 - replicative DNA helicase 1021 49.00 0 1061896..1062795 + 299 148270166 - Tpet_1032 - purine nucleoside phosphorylase 1022 53.66 +2 1062805..1063542 + 245 148270167 - Tpet_1033 - zinc/iron permease 1023 46.58 0 1063548..1064453 + 301 148270168 - Tpet_1034 - hypothetical protein 1024 47.52 0 1064458..1064880 + 140 148270169 - Tpet_1035 - ribonuclease III 1025 46.64 0 1064834..1065562 + 242 148270170 - Tpet_1036 - RNA methyltransferase 1026 48.08 0 1065552..1066331 + 259 148270171 - Tpet_1037 - HAD family hydrolase 1027 49.33 +1 1066311..1067135 - 274 148270172 - Tpet_1038 - aldo/keto reductase 1028 49.71 +1 1067223..1068254 + 343 148270173 - Tpet_1039 - threonine aldolase 1029 48.56 0 1068333..1068956 + 207 148270174 - Tpet_1040 - hypothetical protein 1030 46.65 0 1069117..1070190 + 357 148270175 - Tpet_1041 - butyrate kinase 1031 47.85 0 1070187..1071068 + 293 148270176 - Tpet_1042 - phosphate butyryltransferase 1032 44.75 0 1072141..1072788 + 215 148270177 - Tpet_1044 - hypothetical protein 1033 46.15 0 1072793..1073026 + 77 148270178 - Tpet_1045 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1034 49.25 0 1073039..1074100 + 353 148270179 - Tpet_1046 - 2-ketoisovalerate ferredoxin reductase 1035 48.25 0 1074091..1074834 + 247 148270180 - Tpet_1047 - thiamine pyrophosphate binding domain-containing protein 1036 45.96 0 1074836..1075405 + 189 148270181 - Tpet_1048 - pyruvate ferredoxin/flavodoxin oxidoreductase 1037 48.62 0 1075528..1077522 - 664 148270182 - Tpet_1049 - excinuclease ABC subunit B 1038 50.42 +1 1077634..1079541 + 635 148270183 - Tpet_1050 - transketolase 1039 44.80 0 1079615..1080172 + 185 148270184 - Tpet_1051 - translation elongation factor P 1040 43.17 0 1080188..1080553 + 121 148270185 - Tpet_1052 - hypothetical protein 1041 43.12 0 1080575..1081003 + 142 148270186 nusB Tpet_1053 - transcription antitermination protein NusB 1042 49.54 +1 1081015..1082643 + 542 148270187 - Tpet_1054 - formate--tetrahydrofolate ligase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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