version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 810 49.76 +1 832369..833403 - 344 148269955 - Tpet_0820 - inner-membrane translocator 811 45.87 0 833400..834923 - 507 148269956 - Tpet_0821 - ABC transporter related 812 49.44 +1 834959..836038 - 359 148269957 - Tpet_0822 - basic membrane lipoprotein 813 41.20 -1 836035..837903 - 622 148269958 - Tpet_0823 - hypothetical protein 814 46.44 0 837954..840020 + 688 148269959 - Tpet_0824 - DNA ligase, NAD-dependent 815 42.48 -1 840011..840775 + 254 148269960 - Tpet_0825 - hypothetical protein 816 47.78 0 840772..842079 + 435 148269961 obgE Tpet_0826 - GTPase ObgE 817 43.49 0 842063..842653 + 196 148269962 - Tpet_0827 - nicotinate (nicotinamide) nucleotide adenylyltransferase 818 44.19 0 842643..843563 + 306 148269963 - Tpet_0828 - nifR3 family TIM-barrel protein 819 41.19 -1 843566..844036 + 156 148269964 - Tpet_0829 - rubrerythrin 820 44.25 0 844038..845237 + 399 148269965 - Tpet_0830 - type II secretion system protein 821 39.32 -2 845234..845617 + 127 148269966 - Tpet_0831 - hypothetical protein 822 40.67 -1 845619..846599 + 326 148269967 - Tpet_0832 - hypothetical protein 823 36.61 -2 846571..847119 + 182 148269968 - Tpet_0833 - hypothetical protein 824 41.49 -1 847116..847532 + 138 148269969 - Tpet_0834 - hypothetical protein 825 46.54 0 847529..847990 + 153 148269970 - Tpet_0835 - hypothetical protein 826 42.92 0 848006..851854 + 1282 148269971 - Tpet_0836 - type II and III secretion system protein 827 47.48 0 851851..852684 + 277 148269972 - Tpet_0837 - hypothetical protein 828 45.22 0 852665..854086 - 473 148269973 - Tpet_0838 - integral membrane protein MviN 829 43.37 0 854154..854432 + 92 148269974 - Tpet_0839 - anti-sigma-28 factor, FlgM 830 40.49 -1 854429..854875 + 148 148269975 - Tpet_0840 - hypothetical protein 831 48.27 0 854878..857454 + 858 148269976 - Tpet_0841 - flagellar hook-associated protein FlgK 832 47.65 0 857460..858374 + 304 148269977 - Tpet_0842 - flagellar hook-associated protein 3 833 46.22 0 858379..858828 + 149 148269978 - Tpet_0843 - flagellar assembly protein FliW 834 47.89 0 859071..859970 + 299 148269979 - Tpet_0844 - periplasmic binding protein 835 47.06 0 859967..860935 + 322 148269980 - Tpet_0845 - transport system permease protein 836 46.56 0 860937..861707 + 256 148269981 - Tpet_0846 - ABC transporter related 837 49.49 +1 861690..862667 - 325 148269982 - Tpet_0847 - Acetyl xylan esterase 838 49.59 +1 862674..865010 - 778 148269983 - Tpet_0848 - glycoside hydrolase family 3 protein 839 47.87 0 865052..866014 - 320 148269984 - Tpet_0849 - oligopeptide/dipeptide ABC transporter, ATPase subunit 840 46.73 0 866001..867008 - 335 148269985 - Tpet_0850 - oligopeptide/dipeptide ABC transporter, ATPase subunit 841 46.20 0 867010..867864 - 284 148269986 - Tpet_0851 - binding-protein-dependent transport systems inner membrane component 842 42.66 -1 867881..868888 - 335 148269987 - Tpet_0852 - binding-protein-dependent transport systems inner membrane component 843 46.54 0 868962..870839 - 625 148269988 - Tpet_0853 - extracellular solute-binding protein 844 42.53 -1 871060..872103 + 347 148269989 - Tpet_0854 - endo-1,4-beta-xylanase 845 46.17 0 872125..873207 - 360 148269990 - Tpet_0855 - mannonate dehydratase 846 44.69 0 873204..874823 - 539 148269991 - Tpet_0856 - mannitol dehydrogenase domain-containing protein 847 46.96 0 874836..875855 - 339 148269992 - Tpet_0857 - ribokinase-like domain-containing protein 848 47.71 0 875852..876463 - 203 148269993 - Tpet_0858 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 849 41.43 -1 876533..877273 - 246 148269994 - Tpet_0859 - transcriptional regulator IclR-like protein 850 48.67 0 877375..878730 + 451 148269995 - Tpet_0860 - glucuronate isomerase 851 40.72 -1 878742..879188 + 148 148269996 - Tpet_0861 - hypothetical protein 852 46.07 0 879238..879771 - 177 148269997 - Tpet_0862 - carbohydrate-binding CenC domain-containing protein 853 48.93 0 879825..883004 - 1059 148269998 - Tpet_0863 - endo-1,4-beta-xylanase 854 46.20 0 883324..884310 + 328 148269999 - Tpet_0864 - binding-protein-dependent transport systems inner membrane component 855 45.71 0 884321..885427 + 368 148270000 - Tpet_0865 - binding-protein-dependent transport systems inner membrane component 856 44.28 0 885441..886436 + 331 148270001 - Tpet_0866 - oligopeptide/dipeptide ABC transporter, ATPase subunit 857 45.33 0 886433..887449 + 338 148270002 - Tpet_0867 - oligopeptide/dipeptide ABC transporter, ATPase subunit 858 49.95 +1 887463..889436 + 657 148270003 - Tpet_0868 - extracellular solute-binding protein 859 44.89 0 889492..891516 + 674 148270004 - Tpet_0869 - Alpha-glucuronidase 860 44.84 0 891517..892107 - 196 148270005 - Tpet_0870 - hypothetical protein 861 43.93 0 892104..893198 - 364 148270006 - Tpet_0871 - hypothetical protein 862 41.14 -1 893195..893527 - 110 148270007 - Tpet_0872 - hypothetical protein 863 45.96 0 893524..895527 - 667 148270008 - Tpet_0873 - ferrous iron transport protein B 864 44.52 0 895502..895966 - 154 148270009 - Tpet_0874 - FeoA family protein 865 46.06 0 896067..896852 - 261 148270010 - Tpet_0875 - hypothetical protein 866 47.87 0 897141..898358 + 405 148270011 - Tpet_0877 - IS605 family transposase OrfB 867 42.17 -1 898496..898744 - 82 148270012 - Tpet_0878 - hypothetical protein 868 45.36 0 898772..899320 - 182 148270013 - Tpet_0879 - hypothetical protein 869 43.79 0 899405..901144 + 579 148270014 - Tpet_0880 - ABC transporter related 870 44.54 0 901157..902236 + 359 148270015 - Tpet_0881 - peptidase M24 871 45.64 0 902220..902609 - 129 148270016 - Tpet_0882 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 872 46.12 0 902669..903505 - 278 148270017 - Tpet_0883 - dihydropteroate synthase 873 45.00 0 903509..904288 - 259 148270018 - Tpet_0884 - putative GTP cyclohydrolase 874 46.56 0 904285..904647 - 120 148270019 - Tpet_0885 - putative 6-pyruvoyl tetrahydropterin synthase 875 43.33 0 904658..905908 - 416 148270020 - Tpet_0886 - metal dependent phosphohydrolase 876 42.59 -1 905889..906428 - 179 148270021 - Tpet_0887 - putative NTPase 877 44.73 0 906425..907924 - 499 148270022 - Tpet_0888 - hypothetical protein 878 47.39 0 907970..909043 - 357 148270023 - Tpet_0889 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 879 46.25 0 909130..910383 - 417 148270024 - Tpet_0890 - phospholipase/carboxylesterase 880 39.48 -2 910600..911820 + 406 148270025 - Tpet_0891 - ROK family protein 881 50.30 +1 911851..913665 + 604 148270026 - Tpet_0892 - extracellular solute-binding protein 882 44.25 0 913728..914744 + 338 148270027 - Tpet_0893 - binding-protein-dependent transport systems inner membrane component 883 47.21 0 914748..915590 + 280 148270028 - Tpet_0894 - binding-protein-dependent transport systems inner membrane component 884 44.31 0 915594..916586 + 330 148270029 - Tpet_0895 - oligopeptide/dipeptide ABC transporter, ATPase subunit 885 46.59 0 916583..917389 + 268 148270030 - Tpet_0896 - ABC transporter related 886 42.51 -1 917389..917595 + 68 148270031 - Tpet_0897 - hypothetical protein 887 46.89 0 917576..919744 + 722 148270032 - Tpet_0898 - glycoside hydrolase family 3 protein 888 49.69 +1 919760..921685 + 641 148270033 - Tpet_0899 - glycoside hydrolase family protein 889 48.12 0 921746..923713 + 655 148270034 - Tpet_0900 - methyl-accepting chemotaxis sensory transducer 890 44.68 0 923790..925340 + 516 148270035 - Tpet_0901 - DNA mismatch repair protein MutL 891 43.69 0 925337..925645 - 102 148270036 - Tpet_0902 - hypothetical protein 892 47.92 0 925642..926025 - 127 148270037 - Tpet_0903 - CrcB protein 893 50.58 +1 926022..926792 - 256 148270038 fabG Tpet_0904 - 3-ketoacyl-(acyl-carrier-protein) reductase 894 48.62 0 926834..927808 - 324 148270039 - Tpet_0905 - thiamine pyrophosphate binding domain-containing protein 895 50.55 +1 927823..929001 - 392 148270040 - Tpet_0906 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 896 46.00 0 929004..929303 - 99 148270041 - Tpet_0907 - pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 897 49.09 0 929316..929918 - 200 148270042 - Tpet_0908 - pyruvate/ketoisovalerate oxidoreductase, gamma subunit 898 44.09 0 929985..930821 - 278 148270043 - Tpet_0909 - methyl-accepting chemotaxis sensory transducer 899 46.19 0 930831..931592 - 253 148270044 - Tpet_0910 - beta-lactamase domain-containing protein 900 49.28 0 931796..932284 + 162 148270045 - Tpet_0911 - NADH dehydrogenase (ubiquinone), 24 kDa subunit 901 50.66 +1 932287..932667 + 126 148270046 - Tpet_0912 - ferredoxin-like protein 902 50.66 +1 932686..934509 + 607 148270047 - Tpet_0913 - NADH dehydrogenase (quinone) 903 47.55 0 934506..934934 + 142 148270048 - Tpet_0914 - rubrerythrin 904 46.81 0 934970..935644 - 224 148270049 - Tpet_0915 - cyclase family protein 905 46.85 0 935678..936994 + 438 148270050 - Tpet_0916 - transglutaminase domain-containing protein 906 47.30 0 936998..938035 + 345 148270051 - Tpet_0917 - mandelate racemase/muconate lactonizing protein 907 46.85 0 938032..939984 + 650 148270052 - Tpet_0918 - putative DNA helicase 908 49.12 0 941897..943423 - 508 148270053 ushA Tpet_0919 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 909 47.87 0 943498..944247 + 249 148270054 - Tpet_0920 - radical SAM domain-containing protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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