version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 775 46.90 0 798200..798892 + 230 148269920 - Tpet_0785 - indole-3-glycerol-phosphate synthase 776 46.60 0 798880..799497 + 205 148269921 - Tpet_0786 - phosphoribosylanthranilate isomerase 777 51.20 +1 799500..800669 + 389 148269922 - Tpet_0787 - tryptophan synthase subunit beta 778 47.08 0 800666..801385 + 239 148269923 - Tpet_0788 - tryptophan synthase, alpha subunit 779 45.73 0 801408..802343 - 311 148269924 - Tpet_0789 - radical SAM domain-containing protein 780 49.39 +1 802349..802921 - 190 148269925 - Tpet_0790 - beta-lactamase domain-containing protein 781 47.30 0 802918..803712 - 264 148269926 - Tpet_0791 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 782 47.18 0 803673..804257 - 194 148269927 - Tpet_0792 - isochorismatase hydrolase 783 46.46 0 804259..805035 - 258 148269928 - Tpet_0793 - flagellin domain-containing protein 784 49.09 0 805252..806406 - 384 148269929 - Tpet_0794 - major facilitator transporter 785 47.45 0 806467..807543 + 358 148269930 - Tpet_0795 - peptidase dimerisation domain-containing protein 786 46.44 0 807533..808921 + 462 148269931 - Tpet_0796 - pyruvate carboxylase subunit B 787 43.47 0 808867..809724 - 285 148269932 - Tpet_0797 - integral membrane sensor signal transduction histidine kinase 788 46.76 0 809721..810383 - 220 148269933 - Tpet_0798 - two component transcriptional regulator 789 48.75 0 810380..811177 - 265 148269934 - Tpet_0799 - ABC-3 protein 790 46.20 0 811174..811896 - 240 148269935 - Tpet_0800 - ABC transporter related 791 47.01 0 811893..812696 - 267 148269936 - Tpet_0801 - periplasmic solute binding protein 792 40.98 -1 812693..813058 - 121 148269937 - Tpet_0802 - ferric uptake regulator family protein 793 45.72 0 813280..814377 + 365 148269938 - Tpet_0803 - lysine 2,3-aminomutase YodO family protein 794 44.32 0 814394..814948 - 184 148269939 - Tpet_0804 - nitroreductase 795 50.35 +1 814951..815808 - 285 148269940 - Tpet_0805 - acetamidase/formamidase 796 47.91 0 815821..818304 - 827 148269941 - Tpet_0806 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 797 44.72 0 818463..819191 + 242 148269942 - Tpet_0807 - radical SAM domain-containing protein 798 48.28 0 819213..820691 - 492 148269943 - Tpet_0808 - xylulokinase 799 44.18 0 820691..822220 - 509 148269944 - Tpet_0809 - ABC transporter related 800 48.97 0 822269..823240 - 323 148269945 - Tpet_0810 - periplasmic binding protein/LacI transcriptional regulator 801 43.89 0 823265..823984 - 239 148269946 - Tpet_0811 - polysaccharide deacetylase 802 50.63 +1 823999..824952 - 317 148269947 - Tpet_0812 - monosaccharide-transporting ATPase 803 47.34 0 824965..826128 - 387 148269948 - Tpet_0813 - iron-containing alcohol dehydrogenase 804 44.74 0 826142..827281 - 379 148269949 - Tpet_0814 - ROK family protein 805 43.41 0 827389..828351 - 320 148269950 - Tpet_0815 - radical SAM domain-containing protein 806 46.92 0 828332..829597 - 421 148269951 - Tpet_0816 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 807 42.41 -1 829598..830170 - 190 148269952 - Tpet_0817 - putative diguanylate cyclase 808 41.43 -1 830247..831431 + 394 148269953 - Tpet_0818 - RecB family-like nuclease 809 50.42 +1 831413..832372 - 319 148269954 - Tpet_0819 - inner-membrane translocator 810 49.76 +1 832369..833403 - 344 148269955 - Tpet_0820 - inner-membrane translocator 811 45.87 0 833400..834923 - 507 148269956 - Tpet_0821 - ABC transporter related 812 49.44 +1 834959..836038 - 359 148269957 - Tpet_0822 - basic membrane lipoprotein 813 41.20 -1 836035..837903 - 622 148269958 - Tpet_0823 - hypothetical protein 814 46.44 0 837954..840020 + 688 148269959 - Tpet_0824 - DNA ligase, NAD-dependent 815 42.48 -1 840011..840775 + 254 148269960 - Tpet_0825 - hypothetical protein 816 47.78 0 840772..842079 + 435 148269961 obgE Tpet_0826 - GTPase ObgE 817 43.49 0 842063..842653 + 196 148269962 - Tpet_0827 - nicotinate (nicotinamide) nucleotide adenylyltransferase 818 44.19 0 842643..843563 + 306 148269963 - Tpet_0828 - nifR3 family TIM-barrel protein 819 41.19 -1 843566..844036 + 156 148269964 - Tpet_0829 - rubrerythrin 820 44.25 0 844038..845237 + 399 148269965 - Tpet_0830 - type II secretion system protein 821 39.32 -2 845234..845617 + 127 148269966 - Tpet_0831 - hypothetical protein 822 40.67 -1 845619..846599 + 326 148269967 - Tpet_0832 - hypothetical protein 823 36.61 -2 846571..847119 + 182 148269968 - Tpet_0833 - hypothetical protein 824 41.49 -1 847116..847532 + 138 148269969 - Tpet_0834 - hypothetical protein 825 46.54 0 847529..847990 + 153 148269970 - Tpet_0835 - hypothetical protein 826 42.92 0 848006..851854 + 1282 148269971 - Tpet_0836 - type II and III secretion system protein 827 47.48 0 851851..852684 + 277 148269972 - Tpet_0837 - hypothetical protein 828 45.22 0 852665..854086 - 473 148269973 - Tpet_0838 - integral membrane protein MviN 829 43.37 0 854154..854432 + 92 148269974 - Tpet_0839 - anti-sigma-28 factor, FlgM 830 40.49 -1 854429..854875 + 148 148269975 - Tpet_0840 - hypothetical protein 831 48.27 0 854878..857454 + 858 148269976 - Tpet_0841 - flagellar hook-associated protein FlgK 832 47.65 0 857460..858374 + 304 148269977 - Tpet_0842 - flagellar hook-associated protein 3 833 46.22 0 858379..858828 + 149 148269978 - Tpet_0843 - flagellar assembly protein FliW 834 47.89 0 859071..859970 + 299 148269979 - Tpet_0844 - periplasmic binding protein 835 47.06 0 859967..860935 + 322 148269980 - Tpet_0845 - transport system permease protein 836 46.56 0 860937..861707 + 256 148269981 - Tpet_0846 - ABC transporter related 837 49.49 +1 861690..862667 - 325 148269982 - Tpet_0847 - Acetyl xylan esterase 838 49.59 +1 862674..865010 - 778 148269983 - Tpet_0848 - glycoside hydrolase family 3 protein 839 47.87 0 865052..866014 - 320 148269984 - Tpet_0849 - oligopeptide/dipeptide ABC transporter, ATPase subunit 840 46.73 0 866001..867008 - 335 148269985 - Tpet_0850 - oligopeptide/dipeptide ABC transporter, ATPase subunit 841 46.20 0 867010..867864 - 284 148269986 - Tpet_0851 - binding-protein-dependent transport systems inner membrane component 842 42.66 -1 867881..868888 - 335 148269987 - Tpet_0852 - binding-protein-dependent transport systems inner membrane component 843 46.54 0 868962..870839 - 625 148269988 - Tpet_0853 - extracellular solute-binding protein 844 42.53 -1 871060..872103 + 347 148269989 - Tpet_0854 - endo-1,4-beta-xylanase 845 46.17 0 872125..873207 - 360 148269990 - Tpet_0855 - mannonate dehydratase 846 44.69 0 873204..874823 - 539 148269991 - Tpet_0856 - mannitol dehydrogenase domain-containing protein 847 46.96 0 874836..875855 - 339 148269992 - Tpet_0857 - ribokinase-like domain-containing protein 848 47.71 0 875852..876463 - 203 148269993 - Tpet_0858 - 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 849 41.43 -1 876533..877273 - 246 148269994 - Tpet_0859 - transcriptional regulator IclR-like protein 850 48.67 0 877375..878730 + 451 148269995 - Tpet_0860 - glucuronate isomerase 851 40.72 -1 878742..879188 + 148 148269996 - Tpet_0861 - hypothetical protein 852 46.07 0 879238..879771 - 177 148269997 - Tpet_0862 - carbohydrate-binding CenC domain-containing protein 853 48.93 0 879825..883004 - 1059 148269998 - Tpet_0863 - endo-1,4-beta-xylanase 854 46.20 0 883324..884310 + 328 148269999 - Tpet_0864 - binding-protein-dependent transport systems inner membrane component 855 45.71 0 884321..885427 + 368 148270000 - Tpet_0865 - binding-protein-dependent transport systems inner membrane component 856 44.28 0 885441..886436 + 331 148270001 - Tpet_0866 - oligopeptide/dipeptide ABC transporter, ATPase subunit 857 45.33 0 886433..887449 + 338 148270002 - Tpet_0867 - oligopeptide/dipeptide ABC transporter, ATPase subunit 858 49.95 +1 887463..889436 + 657 148270003 - Tpet_0868 - extracellular solute-binding protein 859 44.89 0 889492..891516 + 674 148270004 - Tpet_0869 - Alpha-glucuronidase 860 44.84 0 891517..892107 - 196 148270005 - Tpet_0870 - hypothetical protein 861 43.93 0 892104..893198 - 364 148270006 - Tpet_0871 - hypothetical protein 862 41.14 -1 893195..893527 - 110 148270007 - Tpet_0872 - hypothetical protein 863 45.96 0 893524..895527 - 667 148270008 - Tpet_0873 - ferrous iron transport protein B 864 44.52 0 895502..895966 - 154 148270009 - Tpet_0874 - FeoA family protein 865 46.06 0 896067..896852 - 261 148270010 - Tpet_0875 - hypothetical protein 866 47.87 0 897141..898358 + 405 148270011 - Tpet_0877 - IS605 family transposase OrfB 867 42.17 -1 898496..898744 - 82 148270012 - Tpet_0878 - hypothetical protein 868 45.36 0 898772..899320 - 182 148270013 - Tpet_0879 - hypothetical protein 869 43.79 0 899405..901144 + 579 148270014 - Tpet_0880 - ABC transporter related 870 44.54 0 901157..902236 + 359 148270015 - Tpet_0881 - peptidase M24 871 45.64 0 902220..902609 - 129 148270016 - Tpet_0882 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 872 46.12 0 902669..903505 - 278 148270017 - Tpet_0883 - dihydropteroate synthase 873 45.00 0 903509..904288 - 259 148270018 - Tpet_0884 - putative GTP cyclohydrolase 874 46.56 0 904285..904647 - 120 148270019 - Tpet_0885 - putative 6-pyruvoyl tetrahydropterin synthase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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