version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 608 50.99 +1 615905..616561 + 218 148269753 - Tpet_0617 - putative translaldolase 609 48.11 0 616587..617642 - 351 148269754 - Tpet_0618 - gamma-glutamyl kinase 610 49.60 +1 617645..618892 - 415 148269755 - Tpet_0619 - gamma-glutamyl phosphate reductase 611 46.11 0 618905..619405 - 166 148269756 leuD Tpet_0620 - 3-isopropylmalate dehydratase small subunit 612 49.96 +1 619419..620675 - 418 148269757 - Tpet_0621 - 3-isopropylmalate dehydratase large subunit 613 45.29 0 620668..621771 - 367 148269758 - Tpet_0622 - 2-methylcitrate synthase/citrate synthase II 614 48.65 0 621989..623248 + 419 148269759 - Tpet_0623 - 6-phosphofructokinase 615 45.76 0 623278..625071 - 597 148269760 - Tpet_0624 - ABC transporter, transmembrane region 616 47.17 0 625064..626797 - 577 148269761 - Tpet_0625 - ABC transporter related 617 42.16 -1 626794..627246 - 150 148269762 - Tpet_0626 - PadR-like family transcriptional regulator 618 43.32 0 627314..628525 - 403 148269763 - Tpet_0627 - glycerol-1-phosphate dehydrogenase (NAD(P)(+)) 619 48.13 0 628529..630049 - 506 148269764 - Tpet_0628 - carbohydrate kinase, FGGY 620 48.51 0 630062..630700 - 212 148269765 - Tpet_0629 - L-ribulose-5-phosphate 4-epimerase 621 46.03 0 630777..631847 - 356 148269766 - Tpet_0630 - aldose 1-epimerase 622 45.91 0 631876..633330 - 484 148269767 - Tpet_0631 - Alpha-N-arabinofuranosidase 623 41.85 -1 633345..635774 - 809 148269768 - Tpet_0632 - hypothetical protein 624 44.75 0 635786..637720 - 644 148269769 - Tpet_0633 - Alpha-N-arabinofuranosidase 625 43.27 0 637707..638561 - 284 148269770 - Tpet_0634 - binding-protein-dependent transport systems inner membrane component 626 44.87 0 638563..639507 - 314 148269771 - Tpet_0635 - binding-protein-dependent transport systems inner membrane component 627 43.43 0 639529..640776 - 415 148269772 - Tpet_0636 - extracellular solute-binding protein 628 42.66 -1 641028..642443 + 471 148269773 - Tpet_0637 - glycoside hydrolase family protein 629 45.02 0 642474..643226 + 250 148269774 - Tpet_0638 - hypothetical protein 630 46.57 0 643236..644663 + 475 148269775 - Tpet_0639 - glycoside hydrolase family protein 631 49.40 +1 644680..645432 + 250 148269776 - Tpet_0640 - hypothetical protein 632 46.46 0 645448..646224 + 258 148269777 - Tpet_0641 - hypothetical protein 633 42.47 -1 646230..646973 + 247 148269778 - Tpet_0642 - LamG domain-containing protein 634 47.24 0 646998..648860 - 620 148269779 - Tpet_0643 - hypothetical protein 635 48.47 0 648981..649832 - 283 148269780 - Tpet_0644 - binding-protein-dependent transport systems inner membrane component 636 46.99 0 649832..650761 - 309 148269781 - Tpet_0645 - binding-protein-dependent transport systems inner membrane component 637 47.09 0 650751..651731 - 326 148269782 - Tpet_0646 - ABC-type sugar transport system periplasmic component-like protein 638 45.57 0 651728..652054 - 108 148269783 - Tpet_0647 - hypothetical protein 639 48.49 0 652247..653737 + 496 148269784 - Tpet_0648 - L-arabinose isomerase 640 44.10 0 653756..654712 - 318 148269785 - Tpet_0649 - periplasmic binding protein/LacI transcriptional regulator 641 46.45 0 654829..656040 - 403 148269786 - Tpet_0650 - acetate kinase 642 46.60 0 656053..656994 - 313 148269787 - Tpet_0651 - fructose-1,6-bisphosphate aldolase, class II 643 48.90 0 657042..659687 - 881 148269788 - Tpet_0652 - pyruvate phosphate dikinase 644 45.26 0 659762..660994 - 410 148269789 - Tpet_0653 - hypothetical protein 645 45.15 0 661059..661904 + 281 148269790 - Tpet_0654 - methylenetetrahydrofolate reductase 646 44.01 0 661891..662499 + 202 148269791 - Tpet_0655 - vitamin B12 dependent methionine synthase, activation region 647 46.47 0 662483..664789 + 768 148269792 - Tpet_0656 - homocysteine S-methyltransferase 648 45.53 0 664794..666146 + 450 148269793 trmE Tpet_0657 - tRNA modification GTPase TrmE 649 46.52 0 666175..666447 - 90 148269794 - Tpet_0658 - histone family protein DNA-binding protein 650 44.03 0 666628..668301 - 557 148269795 - Tpet_0659 - excinuclease ABC, C subunit 651 44.44 0 668261..668980 - 239 148269796 - Tpet_0660 - pseudouridine synthase 652 47.79 0 668977..670857 - 626 148269797 - Tpet_0661 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 653 44.60 0 670868..671968 - 366 148269798 - Tpet_0662 - DNA polymerase III, beta subunit 654 45.99 0 671982..673190 - 402 148269799 - Tpet_0663 - phosphate transporter 655 42.15 -1 673203..673871 - 222 148269800 - Tpet_0664 - hypothetical protein 656 43.75 0 673868..674779 - 303 148269801 - Tpet_0665 - D-alanine--D-alanine ligase 657 43.64 0 674694..676595 - 633 148269802 - Tpet_0666 - DNA topoisomerase I 658 43.82 0 676588..677598 - 336 148269803 - Tpet_0667 - metal dependent phosphohydrolase 659 38.68 -2 677585..677977 - 130 148269804 - Tpet_0668 - hypothetical protein 660 45.59 0 678002..678262 - 86 148269805 - Tpet_0669 - ribosomal protein L28 661 44.59 0 678265..678717 - 150 148269806 smpB Tpet_0670 - SsrA-binding protein 662 43.43 0 678719..679045 - 108 148269807 - Tpet_0671 - hypothetical protein 663 46.39 0 679042..679332 - 96 148269808 - Tpet_0672 - glutamyl-tRNA(Gln) amidotransferase, C subunit 664 39.68 -1 679295..679546 - 83 148269809 - Tpet_0673 - carbon storage regulator, CsrA 665 47.83 0 679551..680564 - 337 148269810 - Tpet_0674 - DNA protecting protein DprA 666 51.16 +1 680551..680853 - 100 148269811 - Tpet_0675 - Fe-S cluster domain-containing protein 667 48.96 0 680858..681433 - 191 148269812 - Tpet_0676 - electron transport complex, RnfABCDGE type, A subunit 668 47.10 0 681430..682032 - 200 148269813 - Tpet_0677 - SoxR-reducing system protein RsxE 669 47.26 0 682029..682703 - 224 148269814 - Tpet_0678 - electron transport complex, RnfABCDGE type, G subunit 670 48.90 0 682700..683656 - 318 148269815 - Tpet_0679 - electron transport complex, RnfABCDGE type, D subunit 671 48.55 0 683653..684960 - 435 148269816 - Tpet_0680 - electron transport complex, RnfABCDGE type, C subunit 672 44.72 0 684965..685816 - 283 148269817 - Tpet_0681 - radical SAM domain-containing protein 673 46.67 0 685813..686037 - 74 148269818 - Tpet_0682 - hypothetical protein 674 42.40 -1 686082..687107 - 341 148269819 - Tpet_0683 - hypothetical protein 675 46.86 0 687111..688382 - 423 148269820 glgC Tpet_0684 - glucose-1-phosphate adenylyltransferase 676 45.18 0 688394..689533 - 379 148269821 - Tpet_0685 - glucose-1-phosphate adenylyltransferase, GlgD subunit 677 41.80 -1 689546..690088 - 180 148269822 - Tpet_0686 - hypothetical protein 678 46.64 0 690156..691628 + 490 148269823 - Tpet_0687 - UDP-N-acetylmuramyl-tripeptide synthetase 679 46.29 0 691625..692905 + 426 148269824 - Tpet_0688 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 680 46.53 0 692902..693810 + 302 148269825 - Tpet_0689 - phospho-N-acetylmuramoyl-pentapeptide-transferase 681 44.93 0 693807..695099 + 430 148269826 - Tpet_0690 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 682 44.66 0 695096..696190 + 364 148269827 - Tpet_0691 - cell cycle protein 683 46.37 0 696187..697206 + 339 148269828 - Tpet_0692 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 684 47.16 0 697203..698576 + 457 148269829 - Tpet_0693 - UDP-N-acetylmuramate--alanine ligase 685 44.86 0 698528..699004 - 158 148269830 - Tpet_0694 - phosphodiesterase 686 45.57 0 699010..699867 - 285 148269831 - Tpet_0695 - auxin efflux carrier 687 48.23 0 699927..701564 - 545 148269832 - Tpet_0696 - NADH dehydrogenase (quinone) 688 47.89 0 701561..702034 - 157 148269833 - Tpet_0697 - NADH-quinone oxidoreductase, E subunit 689 45.63 0 702102..702776 - 224 148269834 - Tpet_0698 - hypothetical protein 690 46.01 0 702776..703714 - 312 148269835 - Tpet_0699 - D-cysteine desulfhydrase 691 44.11 0 703767..704462 + 231 148269836 - Tpet_0700 - biotin--acetyl-CoA-carboxylase ligase 692 49.15 0 704431..704664 - 77 148269837 - Tpet_0701 - RNA-binding S4 domain-containing protein 693 46.57 0 704661..705461 - 266 148269838 - Tpet_0702 - ABC transporter related 694 47.78 0 705511..707109 + 532 148269839 - Tpet_0703 - flagellar M-ring protein FliF 695 48.31 0 707114..708121 + 335 148269840 fliG Tpet_0704 - flagellar motor switch protein G 696 39.52 -1 708123..708833 + 236 148269841 - Tpet_0705 - flagellar biosynthesis/type III secretory pathway protein-like protein 697 48.91 0 708826..710109 + 427 148269842 - Tpet_0706 - flagellar protein export ATPase FliI 698 46.26 0 710086..712104 - 672 148269843 - Tpet_0707 - glycine--tRNA ligase 699 46.81 0 712085..712945 - 286 148269844 glyQ Tpet_0708 - glycyl-tRNA synthetase subunit alpha 700 48.58 0 712949..713335 - 128 148269845 - Tpet_0709 - putative endoribonuclease L-PSP 701 48.14 0 713337..714761 - 474 148269846 - Tpet_0710 - glycine dehydrogenase subunit 2 702 49.09 0 714758..716071 - 437 148269847 - Tpet_0711 - glycine dehydrogenase subunit 1 703 49.05 0 716100..716468 - 122 148269848 - Tpet_0712 - glycine cleavage system protein H 704 46.39 0 716471..717565 - 364 148269849 - Tpet_0713 - glycine cleavage system aminomethyltransferase T 705 39.52 -1 717562..717771 - 69 148269850 - Tpet_0714 - hypothetical protein 706 49.48 +1 717927..718886 + 319 148269851 - Tpet_0715 - 6-phosphofructokinase 707 45.61 0 718900..720300 + 466 148269852 - Tpet_0716 - pyruvate kinase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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