version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 514 44.49 0 514734..515405 - 223 148269659 - Tpet_0521 - two component transcriptional regulator 515 47.73 0 515758..516945 + 395 148269660 - Tpet_0522 - glutamine amidotransferase, class-II 516 50.85 +1 516938..518461 + 507 148269661 - Tpet_0523 - glutamate synthase (NADPH) 517 49.24 0 518455..518913 + 152 148269662 - Tpet_0524 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 518 46.79 0 518910..520187 + 425 148269663 - Tpet_0525 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 519 46.21 0 520175..520912 + 245 148269664 - Tpet_0526 - glutamate synthase alpha subunit 520 45.61 0 520939..522054 - 371 148269665 - Tpet_0527 - ROK family protein 521 46.03 0 522059..523279 - 406 148269666 - Tpet_0528 - glycosyl transferase, group 1 522 45.62 0 524293..525309 + 338 148269667 - Tpet_0529 - glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 523 47.37 0 525416..526747 + 443 148269668 - Tpet_0530 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 524 49.40 +1 526772..527107 + 111 148269669 - Tpet_0531 - alkylhydroperoxidase 525 48.15 0 527153..528502 + 449 148269670 - Tpet_0532 - dihydrolipoamide dehydrogenase 526 44.49 0 528479..529141 - 220 148269671 - Tpet_0533 - HhH-GPD family protein 527 50.10 +1 529170..529670 + 166 148269672 - Tpet_0534 - nitroreductase 528 46.34 0 529802..530347 + 181 148269673 - Tpet_0535 - anaerobic ribonucleoside-triphosphate reductase activator 529 48.57 0 530313..532268 + 651 148269674 - Tpet_0536 - anaerobic ribonucleoside triphosphate reductase 530 46.69 0 532350..533315 + 321 148269675 - Tpet_0537 - nitroreductase 531 44.66 0 534305..535390 - 361 148269676 - Tpet_0539 - ABC-2 type transporter 532 45.81 0 535387..536292 - 301 148269677 - Tpet_0540 - ABC transporter related 533 43.66 0 537842..538567 + 241 148269678 - Tpet_0541 - hypothetical protein 534 48.30 0 538646..539233 + 195 148269679 - Tpet_0542 - propanediol utilization protein 535 45.72 0 539263..539706 - 147 148269680 - Tpet_0543 - heat shock protein Hsp20 536 47.85 0 539722..541512 - 596 148269681 - Tpet_0544 - chaperone protein DnaK 537 45.59 0 541722..544748 + 1008 148269682 - Tpet_0545 - acriflavin resistance protein 538 43.14 0 544738..545196 - 152 148269683 - Tpet_0546 - arginine repressor, ArgR 539 48.15 0 545368..546096 + 242 148269684 - Tpet_0547 - hypothetical protein 540 47.87 0 546093..546539 + 148 148269685 - Tpet_0548 - transcriptional regulators-like protein 541 43.78 0 546549..547658 - 369 148269686 - Tpet_0549 - major facilitator transporter 542 43.92 0 547798..549780 - 660 148269687 - Tpet_0550 - methyl-accepting chemotaxis sensory transducer 543 47.64 0 549828..550505 - 225 148269688 - Tpet_0551 - hypothetical protein 544 48.91 0 550477..551118 - 213 148269689 - Tpet_0552 - endonuclease III 545 48.23 0 551128..552483 - 451 148269690 - Tpet_0553 - putative aminopeptidase 1 546 46.76 0 552483..553808 - 441 148269691 - Tpet_0554 - alpha amylase, catalytic region 547 43.33 0 553805..555454 - 549 148269692 - Tpet_0555 - fibronectin-binding A domain-containing protein 548 44.44 0 555456..556319 - 287 148269693 - Tpet_0556 - apurinic endonuclease Apn1 549 41.05 -1 556375..556698 + 107 148269694 - Tpet_0557 - hypothetical protein 550 43.59 0 556695..557045 - 116 148269695 - Tpet_0558 - MazG nucleotide pyrophosphohydrolase 551 40.44 -1 557039..557938 - 299 148269696 - Tpet_0559 - biotin synthase 552 46.59 0 558018..559088 + 356 148269697 - Tpet_0560 - glycosyl transferase, group 1 553 47.96 0 559102..560010 - 302 148269698 - Tpet_0561 - diacylglycerol kinase, catalytic region 554 40.10 -1 560013..560219 - 68 148269699 - Tpet_0562 - hypothetical protein 555 38.90 -2 560301..561377 - 358 148269700 - Tpet_0563 - iron-containing alcohol dehydrogenase 556 49.75 +1 561591..562796 - 401 148269701 - Tpet_0564 - threonine dehydratase 557 43.57 0 562964..563950 + 328 148269702 - Tpet_0565 - Outer membrane protein-like protein 558 42.80 0 563966..565264 + 432 148269703 - Tpet_0566 - Outer membrane protein-like protein 559 46.53 0 565261..566268 + 335 148269704 - Tpet_0567 - RND family efflux transporter MFP subunit 560 48.51 0 566265..566969 + 234 148269705 - Tpet_0568 - ABC transporter related 561 46.01 0 566956..568170 + 404 148269706 - Tpet_0569 - hypothetical protein 562 46.93 0 569357..569959 + 200 148269707 - Tpet_0570 - lysine exporter protein LysE/YggA 563 47.59 0 569952..570386 - 144 148269708 - Tpet_0571 - 3-dehydroquinate dehydratase 564 48.61 0 570383..571861 - 492 148269709 - Tpet_0572 - shikimate kinase., 3-dehydroquinate synthase 565 51.72 +1 571809..572939 - 376 148269710 - Tpet_0573 - chorismate synthase 566 47.64 0 572936..573697 - 253 148269711 - Tpet_0574 - shikimate dehydrogenase substrate binding subunit 567 50.79 +1 573694..574959 - 421 148269712 - Tpet_0575 - 3-phosphoshikimate 1-carboxyvinyltransferase 568 45.01 0 574956..575717 - 253 148269713 - Tpet_0576 - prephenate dehydrogenase 569 49.85 +1 575714..576730 - 338 148269714 - Tpet_0577 - 3-deoxy-7-phosphoheptulonate synthase 570 47.26 0 576987..578228 - 413 148269715 - Tpet_0578 - major facilitator transporter 571 46.71 0 578424..578924 - 166 148269716 - Tpet_0579 - hypothetical protein 572 47.92 0 578917..579300 - 127 148269717 - Tpet_0580 - hypothetical protein 573 34.26 -2 579483..579590 + 35 148269718 - Tpet_0581 - hypothetical protein 574 48.42 0 579672..581375 + 567 148269719 - Tpet_0582 - radical SAM domain-containing protein 575 47.46 0 581372..582610 + 412 148269720 - Tpet_0583 - dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 576 47.13 0 582637..583767 + 376 148269721 pyrC Tpet_0584 - dihydroorotase 577 49.69 +1 583730..584383 + 217 148269722 - Tpet_0585 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase-like protein 578 49.82 +1 584371..585183 + 270 148269723 - Tpet_0586 - dihydroorotate dehydrogenase family protein 579 46.86 0 585180..585785 + 201 148269724 - Tpet_0587 - orotidine 5'-phosphate decarboxylase 580 51.24 +1 585782..586345 + 187 148269725 pyrE Tpet_0588 - orotate phosphoribosyltransferase 581 46.13 0 586342..587646 + 434 148269726 - Tpet_0589 - amidohydrolase 3 582 34.67 -2 587621..588295 + 224 148269727 - Tpet_0590 - hypothetical protein 583 41.42 -1 588286..589212 - 308 148269728 - Tpet_0591 - DNA methylase N-4/N-6 domain-containing protein 584 43.70 0 589362..590345 - 327 148269729 - Tpet_0592 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 585 44.48 0 590363..591205 - 280 148269730 - Tpet_0593 - RpiR family transcriptional regulator 586 48.28 0 591218..591973 - 251 148269731 - Tpet_0594 - short-chain dehydrogenase/reductase SDR 587 46.50 0 591989..593272 - 427 148269732 - Tpet_0595 - TRAP dicarboxylate transporter, DctM subunit 588 41.25 -1 593274..593753 - 159 148269733 - Tpet_0596 - tripartite ATP-independent periplasmic transporter DctQ 589 46.59 0 593816..594826 - 336 148269734 - Tpet_0597 - TRAP dicarboxylate transporter, DctP subunit 590 45.13 0 594979..595563 + 194 148269735 - Tpet_0598 - hypothetical protein 591 45.59 0 595548..595751 - 67 148269736 - Tpet_0599 - heavy metal transport/detoxification protein 592 48.82 0 595779..597941 - 720 148269737 - Tpet_0600 - heavy metal translocating P-type ATPase 593 49.24 0 597916..598242 - 108 148269738 - Tpet_0601 - alkylhydroperoxidase 594 44.18 0 598235..598483 - 82 148269739 - Tpet_0602 - membrane protein-like protein 595 44.44 0 598578..598757 + 59 148269740 - Tpet_0603 - YHS domain-containing protein 596 48.96 0 598783..599742 - 319 148269741 - Tpet_0604 - aldo/keto reductase 597 47.03 0 599756..600733 - 325 148269742 - Tpet_0605 - oxidoreductase domain-containing protein 598 43.35 0 600793..601281 - 162 148269743 - Tpet_0606 - hypothetical protein 599 46.26 0 601377..603395 - 672 148269744 - Tpet_0607 - Beta-galactosidase 600 48.20 0 603439..605415 - 658 148269745 - Tpet_0608 - extracellular solute-binding protein 601 48.63 0 605735..608029 + 764 148269746 - Tpet_0609 - alpha-xylosidase YicI 602 48.87 0 608046..609467 - 473 148269747 - Tpet_0610 - L-fucose isomerase N-terminal_2 domain-containing protein 603 49.74 +1 609464..610804 - 446 148269748 - Tpet_0611 - Alpha-L-fucosidase 604 42.53 -1 611549..612994 - 481 148269749 - Tpet_0613 - carbohydrate kinase, FGGY 605 46.60 0 613008..613964 - 318 148269750 - Tpet_0614 - alcohol dehydrogenase 606 49.48 +1 613977..614750 - 257 148269751 - Tpet_0615 - short-chain dehydrogenase/reductase SDR 607 46.20 0 614859..615806 + 315 148269752 - Tpet_0616 - ribokinase-like domain-containing protein 608 50.99 +1 615905..616561 + 218 148269753 - Tpet_0617 - putative translaldolase 609 48.11 0 616587..617642 - 351 148269754 - Tpet_0618 - gamma-glutamyl kinase 610 49.60 +1 617645..618892 - 415 148269755 - Tpet_0619 - gamma-glutamyl phosphate reductase 611 46.11 0 618905..619405 - 166 148269756 leuD Tpet_0620 - 3-isopropylmalate dehydratase small subunit 612 49.96 +1 619419..620675 - 418 148269757 - Tpet_0621 - 3-isopropylmalate dehydratase large subunit 613 45.29 0 620668..621771 - 367 148269758 - Tpet_0622 - 2-methylcitrate synthase/citrate synthase II 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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