version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 471 47.42 0 467673..469049 + 458 148269616 aspA Tpet_0476 - aspartate ammonia-lyase 472 48.57 0 469037..470467 - 476 148269617 - Tpet_0477 - carbohydrate kinase, FGGY 473 46.57 0 470464..471747 - 427 148269618 - Tpet_0478 - hypothetical protein 474 49.93 +1 471761..472519 - 252 148269619 - Tpet_0479 - short-chain dehydrogenase/reductase SDR 475 46.40 0 472525..473970 - 481 148269620 - Tpet_0480 - hypothetical protein 476 40.93 -1 473977..474621 - 214 148269621 - Tpet_0481 - GntR family transcriptional regulator 477 44.96 0 474618..476027 - 469 148269622 - Tpet_0482 - 6-phosphogluconate dehydrogenase 478 44.74 0 476045..477385 - 446 148269623 - Tpet_0483 - glycoside hydrolase family protein 479 46.74 0 477388..478491 - 367 148269624 - Tpet_0484 - alcohol dehydrogenase 480 39.84 -1 478691..480550 + 619 148269625 - Tpet_0485 - extracellular solute-binding protein 481 34.62 -2 480614..481621 + 335 148269626 - Tpet_0486 - binding-protein-dependent transport systems inner membrane component 482 38.60 -2 481632..482486 + 284 148269627 - Tpet_0487 - binding-protein-dependent transport systems inner membrane component 483 46.73 0 482488..483495 + 335 148269628 - Tpet_0488 - oligopeptide/dipeptide ABC transporter, ATPase subunit 484 47.25 0 483482..484444 + 320 148269629 - Tpet_0489 - oligopeptide/dipeptide ABC transporter, ATPase subunit 485 47.85 0 484470..486164 + 564 148269630 - Tpet_0490 - Beta-glucuronidase 486 45.68 0 487102..488373 + 423 148269631 - Tpet_0492 - NADH:flavin oxidoreductase/NADH oxidase 487 45.21 0 488370..490364 + 664 148269632 - Tpet_0493 - fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 488 43.58 0 490361..491599 + 412 148269633 - Tpet_0494 - oxidoreductase domain-containing protein 489 44.38 0 491593..492579 + 328 148269634 - Tpet_0495 - oxidoreductase domain-containing protein 490 44.11 0 492592..493482 + 296 148269635 - Tpet_0496 - auxin efflux carrier 491 45.48 0 493769..494863 + 364 148269636 gldA Tpet_0498 - glycerol dehydrogenase 492 43.50 0 494856..495770 - 304 148269637 - Tpet_0499 - xylose isomerase domain-containing protein 493 48.15 0 495789..496868 - 359 148269638 - Tpet_0500 - ABC transporter related 494 47.82 0 496868..497716 - 282 148269639 - Tpet_0501 - binding-protein-dependent transport systems inner membrane component 495 47.23 0 497716..498600 - 294 148269640 - Tpet_0502 - binding-protein-dependent transport systems inner membrane component 496 48.35 0 498637..499968 - 443 148269641 - Tpet_0503 - extracellular solute-binding protein 497 46.49 0 500178..500990 - 270 148269642 - Tpet_0504 - xylose isomerase domain-containing protein 498 47.67 0 500956..501813 - 285 148269643 - Tpet_0505 - ribokinase-like domain-containing protein 499 49.85 +1 501810..502814 - 334 148269644 - Tpet_0506 - oxidoreductase domain-containing protein 500 51.60 +1 502819..503754 - 311 148269645 - Tpet_0507 - creatininase 501 52.49 +1 503801..504985 - 394 148269646 - Tpet_0508 - alcohol dehydrogenase 502 45.24 0 504999..506090 - 363 148269647 - Tpet_0509 - ROK family protein 503 48.27 0 506233..506694 - 153 148269648 - Tpet_0510 - hypothetical protein 504 45.34 0 506691..507506 - 271 148269649 - Tpet_0511 - peptidase M23B 505 48.21 0 507520..508554 - 344 148269650 - Tpet_0512 - chemotaxis-specific methylesterase 506 39.96 -1 508517..508999 - 160 148269651 - Tpet_0513 - diacylglycerol kinase 507 45.27 0 508980..509582 - 200 148269652 - Tpet_0514 - pyruvate ferredoxin/flavodoxin oxidoreductase 508 49.56 +1 509579..510379 - 266 148269653 - Tpet_0515 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 509 46.86 0 510376..510885 - 169 148269654 - Tpet_0516 - CMP/dCMP deaminase, zinc-binding 510 42.98 0 511029..511370 - 113 148269655 - Tpet_0517 - nitrogen regulatory protein P-II 511 51.15 +1 511384..512691 - 435 148269656 - Tpet_0518 - ammonium transporter 512 44.86 0 512998..513552 + 184 148269657 - Tpet_0519 - thymidine kinase 513 44.99 0 513536..514753 - 405 148269658 - Tpet_0520 - integral membrane sensor signal transduction histidine kinase 514 44.49 0 514734..515405 - 223 148269659 - Tpet_0521 - two component transcriptional regulator 515 47.73 0 515758..516945 + 395 148269660 - Tpet_0522 - glutamine amidotransferase, class-II 516 50.85 +1 516938..518461 + 507 148269661 - Tpet_0523 - glutamate synthase (NADPH) 517 49.24 0 518455..518913 + 152 148269662 - Tpet_0524 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 518 46.79 0 518910..520187 + 425 148269663 - Tpet_0525 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 519 46.21 0 520175..520912 + 245 148269664 - Tpet_0526 - glutamate synthase alpha subunit 520 45.61 0 520939..522054 - 371 148269665 - Tpet_0527 - ROK family protein 521 46.03 0 522059..523279 - 406 148269666 - Tpet_0528 - glycosyl transferase, group 1 522 45.62 0 524293..525309 + 338 148269667 - Tpet_0529 - glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 523 47.37 0 525416..526747 + 443 148269668 - Tpet_0530 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 524 49.40 +1 526772..527107 + 111 148269669 - Tpet_0531 - alkylhydroperoxidase 525 48.15 0 527153..528502 + 449 148269670 - Tpet_0532 - dihydrolipoamide dehydrogenase 526 44.49 0 528479..529141 - 220 148269671 - Tpet_0533 - HhH-GPD family protein 527 50.10 +1 529170..529670 + 166 148269672 - Tpet_0534 - nitroreductase 528 46.34 0 529802..530347 + 181 148269673 - Tpet_0535 - anaerobic ribonucleoside-triphosphate reductase activator 529 48.57 0 530313..532268 + 651 148269674 - Tpet_0536 - anaerobic ribonucleoside triphosphate reductase 530 46.69 0 532350..533315 + 321 148269675 - Tpet_0537 - nitroreductase 531 44.66 0 534305..535390 - 361 148269676 - Tpet_0539 - ABC-2 type transporter 532 45.81 0 535387..536292 - 301 148269677 - Tpet_0540 - ABC transporter related 533 43.66 0 537842..538567 + 241 148269678 - Tpet_0541 - hypothetical protein 534 48.30 0 538646..539233 + 195 148269679 - Tpet_0542 - propanediol utilization protein 535 45.72 0 539263..539706 - 147 148269680 - Tpet_0543 - heat shock protein Hsp20 536 47.85 0 539722..541512 - 596 148269681 - Tpet_0544 - chaperone protein DnaK 537 45.59 0 541722..544748 + 1008 148269682 - Tpet_0545 - acriflavin resistance protein 538 43.14 0 544738..545196 - 152 148269683 - Tpet_0546 - arginine repressor, ArgR 539 48.15 0 545368..546096 + 242 148269684 - Tpet_0547 - hypothetical protein 540 47.87 0 546093..546539 + 148 148269685 - Tpet_0548 - transcriptional regulators-like protein 541 43.78 0 546549..547658 - 369 148269686 - Tpet_0549 - major facilitator transporter 542 43.92 0 547798..549780 - 660 148269687 - Tpet_0550 - methyl-accepting chemotaxis sensory transducer 543 47.64 0 549828..550505 - 225 148269688 - Tpet_0551 - hypothetical protein 544 48.91 0 550477..551118 - 213 148269689 - Tpet_0552 - endonuclease III 545 48.23 0 551128..552483 - 451 148269690 - Tpet_0553 - putative aminopeptidase 1 546 46.76 0 552483..553808 - 441 148269691 - Tpet_0554 - alpha amylase, catalytic region 547 43.33 0 553805..555454 - 549 148269692 - Tpet_0555 - fibronectin-binding A domain-containing protein 548 44.44 0 555456..556319 - 287 148269693 - Tpet_0556 - apurinic endonuclease Apn1 549 41.05 -1 556375..556698 + 107 148269694 - Tpet_0557 - hypothetical protein 550 43.59 0 556695..557045 - 116 148269695 - Tpet_0558 - MazG nucleotide pyrophosphohydrolase 551 40.44 -1 557039..557938 - 299 148269696 - Tpet_0559 - biotin synthase 552 46.59 0 558018..559088 + 356 148269697 - Tpet_0560 - glycosyl transferase, group 1 553 47.96 0 559102..560010 - 302 148269698 - Tpet_0561 - diacylglycerol kinase, catalytic region 554 40.10 -1 560013..560219 - 68 148269699 - Tpet_0562 - hypothetical protein 555 38.90 -2 560301..561377 - 358 148269700 - Tpet_0563 - iron-containing alcohol dehydrogenase 556 49.75 +1 561591..562796 - 401 148269701 - Tpet_0564 - threonine dehydratase 557 43.57 0 562964..563950 + 328 148269702 - Tpet_0565 - Outer membrane protein-like protein 558 42.80 0 563966..565264 + 432 148269703 - Tpet_0566 - Outer membrane protein-like protein 559 46.53 0 565261..566268 + 335 148269704 - Tpet_0567 - RND family efflux transporter MFP subunit 560 48.51 0 566265..566969 + 234 148269705 - Tpet_0568 - ABC transporter related 561 46.01 0 566956..568170 + 404 148269706 - Tpet_0569 - hypothetical protein 562 46.93 0 569357..569959 + 200 148269707 - Tpet_0570 - lysine exporter protein LysE/YggA 563 47.59 0 569952..570386 - 144 148269708 - Tpet_0571 - 3-dehydroquinate dehydratase 564 48.61 0 570383..571861 - 492 148269709 - Tpet_0572 - shikimate kinase., 3-dehydroquinate synthase 565 51.72 +1 571809..572939 - 376 148269710 - Tpet_0573 - chorismate synthase 566 47.64 0 572936..573697 - 253 148269711 - Tpet_0574 - shikimate dehydrogenase substrate binding subunit 567 50.79 +1 573694..574959 - 421 148269712 - Tpet_0575 - 3-phosphoshikimate 1-carboxyvinyltransferase 568 45.01 0 574956..575717 - 253 148269713 - Tpet_0576 - prephenate dehydrogenase 569 49.85 +1 575714..576730 - 338 148269714 - Tpet_0577 - 3-deoxy-7-phosphoheptulonate synthase 570 47.26 0 576987..578228 - 413 148269715 - Tpet_0578 - major facilitator transporter 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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