version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 304 43.30 0 285732..286082 + 116 148269449 - Tpet_0304 - DNA polymerase beta subunit 305 45.94 0 286137..287294 - 385 148269450 - Tpet_0305 - ATPase 306 40.53 -1 287629..289032 - 467 148269451 - Tpet_0306 - polysaccharide biosynthesis protein 307 43.16 0 289034..290224 - 396 148269452 - Tpet_0307 - glycosyl transferase, group 1 308 44.48 0 290245..291303 - 352 148269453 - Tpet_0308 - UDP-N-acetylglucosamine 2-epimerase 309 42.01 -1 291300..292394 - 364 148269454 - Tpet_0309 - hypothetical protein 310 52.60 +2 292400..293110 - 236 148269455 - Tpet_0310 - hypothetical protein 311 48.63 0 293110..293985 - 291 148269456 - Tpet_0311 - beta-lactamase domain-containing protein 312 47.41 0 294103..294450 + 115 148269457 - Tpet_0312 - hypothetical protein 313 42.98 0 294476..294703 - 75 148269458 - Tpet_0313 - ribosomal protein S18 314 47.18 0 294718..295143 - 141 148269459 - Tpet_0314 - single-strand binding protein 315 46.77 0 295143..295529 - 128 148269460 - Tpet_0315 - ribosomal protein S6 316 44.74 0 295606..296061 - 151 148269461 - Tpet_0316 - iron dependent repressor 317 45.18 0 296082..296444 - 120 148269462 - Tpet_0317 - hypothetical protein 318 51.49 +1 296441..297784 - 447 148269463 - Tpet_0318 - hypothetical protein 319 49.66 +1 297788..299428 - 546 148269464 - Tpet_0319 - phosphotransferase domain-containing protein 320 50.43 +1 299442..301547 - 701 148269465 - Tpet_0320 - monosaccharide-transporting ATPase 321 48.69 0 301557..302819 - 420 148269466 - Tpet_0321 - binding-protein-dependent transport systems inner membrane component 322 51.75 +1 302914..304173 + 419 148269467 - Tpet_0322 - extracellular solute-binding protein 323 54.82 +2 304298..305614 + 438 148269468 - Tpet_0323 - xanthine/uracil/vitamin C permease 324 51.15 +1 305653..306393 + 246 148269469 - Tpet_0324 - extracellular solute-binding protein 325 53.46 +2 306408..307058 + 216 148269470 - Tpet_0325 - polar amino acid ABC transporter, inner membrane subunit 326 50.62 +1 307055..307783 + 242 148269471 - Tpet_0326 - ABC transporter related 327 50.36 +1 307728..309401 - 557 148269472 - Tpet_0327 - peptidoglycan glycosyltransferase 328 47.54 0 309398..309742 - 114 148269473 - Tpet_0328 - hypothetical protein 329 47.28 0 309739..310362 - 207 148269474 - Tpet_0329 - hypothetical protein 330 52.82 +2 310362..311372 - 336 148269475 - Tpet_0330 - cell shape determining protein MreB 331 47.50 0 311454..313091 + 545 148269476 - Tpet_0331 - putative manganese-dependent inorganic pyrophosphatase 332 48.90 0 313088..313993 + 301 148269477 - Tpet_0332 - hypothetical protein 333 51.15 +1 313923..315005 + 360 148269478 - Tpet_0333 - oxidoreductase domain-containing protein 334 50.71 +1 315002..315709 + 235 148269479 - Tpet_0334 - rhomboid family protein 335 51.72 +1 315696..317000 - 434 148269480 - Tpet_0335 - UDP-glucose 6-dehydrogenase 336 47.84 0 316994..318454 - 486 148269481 - Tpet_0336 - radical SAM domain-containing protein 337 50.47 +1 318414..318839 - 141 148269482 - Tpet_0337 - thioesterase-like protein 338 51.55 +1 318836..320668 - 610 148269483 - Tpet_0338 - ATP-dependent metalloprotease FtsH 339 45.08 0 320655..321914 - 419 148269484 - Tpet_0339 - tRNA(Ile)-lysidine synthetase 340 51.56 +1 322143..322910 + 255 148269485 - Tpet_0340 - pyrroline-5-carboxylate reductase 341 45.56 0 322911..323450 + 179 148269486 - Tpet_0341 - GCN5-related N-acetyltransferase 342 48.61 0 323447..327550 - 1367 148269487 - Tpet_0342 - DNA polymerase III PolC 343 49.00 0 327537..328034 - 165 148269488 - Tpet_0343 - crossover junction endodeoxyribonuclease RuvC 344 48.71 0 328117..329124 - 335 148269489 - Tpet_0344 - S-adenosylmethionine--tRNA-ribosyltransferase-isomerase 345 47.88 0 329099..330562 - 487 148269490 - Tpet_0345 - apolipoprotein N-acyltransferase 346 50.52 +1 330555..331706 - 383 148269491 - Tpet_0346 - DegT/DnrJ/EryC1/StrS aminotransferase 347 49.71 +1 331803..333182 - 459 148269492 - Tpet_0347 - protease Do 348 50.73 +1 333296..334180 + 294 148269493 - Tpet_0348 - signal recognition particle-docking protein FtsY 349 44.14 0 334177..334833 + 218 148269494 - Tpet_0349 - hypothetical protein 350 47.17 0 334833..336473 + 546 148269495 - Tpet_0350 - peptidase M23B 351 47.34 0 336475..336888 + 137 148269496 - Tpet_0351 - BadM/Rrf2 family transcriptional regulator 352 43.59 0 336907..337101 - 64 148269497 - Tpet_0352 - hypothetical protein 353 48.58 0 337105..337773 - 222 148269498 - Tpet_0353 - sugar fermentation stimulation protein 354 44.17 0 337770..338249 - 159 148269499 - Tpet_0354 - hypothetical protein 355 44.86 0 338170..339549 - 459 148269500 - Tpet_0355 - major facilitator transporter 356 42.52 -1 339546..340133 - 195 148269501 - Tpet_0356 - hypothetical protein 357 41.67 -1 340184..340723 + 179 148269502 - Tpet_0357 - hypothetical protein 358 46.08 0 340725..342638 - 637 148269503 - Tpet_0358 - methyltransferase type 11 359 44.32 0 342768..343823 - 351 148269504 - Tpet_0359 - magnesium and cobalt transport protein CorA 360 49.91 +1 343905..344453 - 182 148269505 - Tpet_0360 - DNA protection protein DPS 361 48.77 0 345487..346665 + 392 148269506 - Tpet_0362 - carbamoyl phosphate synthase small subunit 362 51.39 +1 346665..349964 + 1099 148269507 - Tpet_0363 - carbamoyl-phosphate synthase, large subunit 363 49.67 +1 349983..351047 - 354 148269508 - Tpet_0364 - 3-isopropylmalate dehydrogenase 364 49.30 +1 351051..351551 - 166 148269509 - Tpet_0365 - 3-isopropylmalate dehydratase small subunit 365 52.15 +1 351556..352809 - 417 148269510 - Tpet_0366 - 3-isopropylmalate dehydratase, large subunit 366 50.65 +1 352811..354352 - 513 148269511 - Tpet_0367 - 2-isopropylmalate synthase 367 49.35 +1 354339..355955 - 538 148269512 - Tpet_0368 - alpha-isopropylmalate/homocitrate synthase family transferase 368 52.67 +2 355968..357632 - 554 148269513 - Tpet_0369 - dihydroxy-acid dehydratase 369 49.26 0 357622..358632 - 336 148269514 - Tpet_0370 - ketol-acid reductoisomerase 370 48.45 0 358632..359147 - 171 148269515 - Tpet_0371 - acetolactate synthase 3 regulatory subunit 371 49.94 +1 359144..360889 - 581 148269516 - Tpet_0372 - acetolactate synthase, large subunit, biosynthetic type 372 48.96 0 361061..363280 + 739 148269517 - Tpet_0373 - aspartate kinase 373 52.63 +2 363280..364326 + 348 148269518 - Tpet_0374 - threonine synthase 374 46.57 0 364323..365168 + 281 148269519 - Tpet_0375 - homoserine kinase 375 48.71 0 365180..365914 + 244 148269520 - Tpet_0376 - ABC transporter related 376 50.31 +1 367126..368256 - 376 148269521 - Tpet_0379 - malate dehydrogenase 377 51.52 +1 368262..368756 - 164 148269522 - Tpet_0380 - tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 378 46.28 0 368746..369564 - 272 148269523 - Tpet_0381 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 379 51.06 +1 369610..370878 + 422 148269524 - Tpet_0382 - tryptophan synthase subunit beta 380 46.67 0 370892..371746 + 284 148269525 - Tpet_0383 - cation diffusion facilitator family transporter 381 43.96 0 371743..374019 - 758 148269526 - Tpet_0384 - hypothetical protein 382 40.85 -1 374016..374600 - 194 148269527 - Tpet_0385 - hypothetical protein 383 42.39 -1 374784..375401 - 205 148269528 - Tpet_0386 - hypothetical protein 384 42.96 0 375408..375989 - 193 148269529 - Tpet_0387 - RNA polymerase factor sigma-70 385 48.94 0 375991..377541 - 516 148269530 - Tpet_0388 - binding-protein-dependent transport systems inner membrane component 386 49.90 +1 377555..378520 - 321 148269531 - Tpet_0389 - binding-protein-dependent transport systems inner membrane component 387 49.94 +1 378579..380318 - 579 148269532 - Tpet_0390 - extracellular solute-binding protein 388 49.06 0 380334..381503 - 389 148269533 - Tpet_0391 - oligopeptide/dipeptide ABC transporter, ATPase subunit 389 42.72 -1 381520..381732 - 70 148269534 - Tpet_0392 - hypothetical protein 390 45.75 0 381729..382670 - 313 148269535 - Tpet_0393 - methionyl-tRNA formyltransferase 391 45.95 0 382667..383887 - 406 148269536 - Tpet_0394 - small GTP-binding protein 392 46.15 0 383901..384173 - 90 148269537 - Tpet_0395 - RNA chaperone Hfq 393 43.25 0 384210..385127 - 305 148269538 - Tpet_0396 - tRNA delta(2)-isopentenylpyrophosphate transferase 394 45.75 0 385124..385888 - 254 148269539 - Tpet_0397 - hypothetical protein 395 48.57 0 386098..386727 - 209 148269540 - Tpet_0398 - hypothetical protein 396 48.92 0 386738..388129 - 463 148269541 hslU Tpet_0399 - ATP-dependent protease ATP-binding subunit 397 52.35 +1 388141..388671 - 176 148269542 - Tpet_0400 - ATP-dependent protease peptidase subunit 398 47.08 0 388753..389829 + 358 148269543 - Tpet_0401 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 399 46.34 0 389826..390755 + 309 148269544 - Tpet_0402 - putative GAF sensor protein 400 51.28 +1 390765..390959 - 64 148269545 - Tpet_0403 - hypothetical protein 401 42.44 -1 390956..391570 - 204 148269546 - Tpet_0404 - hypothetical protein 402 48.46 0 392602..393513 - 303 148269547 - Tpet_0407 - putative radical SAM protein 403 49.08 0 393585..395318 + 577 148269548 - Tpet_0408 - prolyl-tRNA synthetase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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