version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 218 48.62 0 213310..214068 - 252 148269363 - Tpet_0218 - patatin 219 46.26 0 214071..215285 - 404 148269364 - Tpet_0219 - S-layer domain-containing protein 220 46.76 0 215346..215777 - 143 148269365 - Tpet_0220 - MarR family transcriptional regulator 221 47.53 0 215782..216450 - 222 148269366 - Tpet_0221 - uroporphyrin-III C/tetrapyrrole methyltransferase 222 48.10 0 216452..217162 - 236 148269367 - Tpet_0222 - biotin/lipoate A/B protein ligase 223 44.69 0 217159..217845 - 228 148269368 - Tpet_0223 - methyltransferase GidB 224 44.39 0 217893..220451 + 852 148269369 - Tpet_0224 - hypothetical protein 225 47.64 0 220457..221134 + 225 148269370 - Tpet_0225 - ABC transporter related 226 47.48 0 221098..222051 - 317 148269371 - Tpet_0226 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 227 46.94 0 222094..223320 + 408 148269372 - Tpet_0227 - competence/damage-inducible protein CinA 228 43.95 0 223317..225332 + 671 148269373 - Tpet_0228 - CheA signal transduction histidine kinase 229 40.79 -1 225338..225793 + 151 148269374 - Tpet_0229 - putative CheW protein 230 47.38 0 225797..226159 + 120 148269375 - Tpet_0230 - response regulator receiver protein 231 40.48 -1 226166..226459 + 97 148269376 - Tpet_0231 - hypothetical protein 232 44.40 0 226456..227205 + 249 148269377 fliP Tpet_0232 - flagellar biosynthesis protein FliP 233 47.19 0 227212..227478 + 88 148269378 - Tpet_0233 - flagellar biosynthetic protein FliQ 234 48.47 0 227491..228144 + 217 148269379 - Tpet_0234 - hypothetical protein 235 48.20 0 228162..228773 - 203 148269380 - Tpet_0235 - ATP-dependent Clp protease, proteolytic subunit ClpP 236 46.24 0 228745..230022 - 425 148269381 - Tpet_0236 - trigger factor domain-containing protein 237 39.56 -1 230049..230321 - 90 148269382 - Tpet_0237 - hypothetical protein 238 42.94 0 230327..230836 - 169 148269383 - Tpet_0238 - holo-acyl-carrier-protein synthase 239 46.70 0 230833..231483 - 216 148269384 - Tpet_0239 - methyltransferase type 11 240 44.22 0 231480..231929 - 149 148269385 - Tpet_0240 - GatB/Yqey domain-containing protein 241 47.13 0 231975..232706 - 243 148269386 - Tpet_0241 - Triose-phosphate isomerase 242 50.17 +1 232739..233938 - 399 148269387 - Tpet_0242 - phosphoglycerate kinase 243 50.40 +1 233991..234992 - 333 148269388 - Tpet_0243 - glyceraldehyde-3-phosphate dehydrogenase, type I 244 45.38 0 235009..235365 - 118 148269389 - Tpet_0244 - hypothetical protein 245 46.35 0 235367..236803 - 478 148269390 - Tpet_0245 - DNA polymerase III, subunits gamma and tau 246 44.44 0 236868..237461 + 197 148269391 - Tpet_0246 - lytic transglycosylase, catalytic 247 45.78 0 237458..237931 - 157 148269392 - Tpet_0247 - tartrate dehydratase subunit beta 248 48.38 0 237928..238545 - 205 148269393 - Tpet_0248 - peptidase M50 249 44.48 0 238539..239489 - 316 148269394 - Tpet_0249 - polysaccharide pyruvyl transferase 250 46.42 0 239552..240292 + 246 148269395 - Tpet_0250 - beta-lactamase domain-containing protein 251 46.97 0 240282..241322 - 346 148269396 - Tpet_0251 - CheC, inhibitor of MCP methylation 252 45.39 0 241319..242305 - 328 148269397 - Tpet_0252 - flagellar motor switch protein FliM 253 49.02 0 242315..242824 - 169 148269398 - Tpet_0253 - flagellar basal body-associated protein FliL 254 44.75 0 242834..243700 - 288 148269399 - Tpet_0254 - OmpA/MotB domain-containing protein 255 47.28 0 243700..244488 - 262 148269400 - Tpet_0255 - MotA/TolQ/ExbB proton channel 256 43.14 0 244493..244696 - 67 148269401 - Tpet_0256 - flagellar FlbD family protein 257 48.77 0 244703..246574 - 623 148269402 - Tpet_0257 - hypothetical protein 258 46.81 0 246574..247248 - 224 148269403 - Tpet_0258 - flagellar hook capping protein 259 41.02 -1 247245..249221 - 658 148269404 - Tpet_0259 - flagellar hook-length control protein 260 45.79 0 249248..250162 - 304 148269405 - Tpet_0260 - hypothetical protein 261 44.64 0 250275..250619 + 114 148269406 - Tpet_0261 - hypothetical protein 262 49.08 0 250644..251240 + 198 148269407 - Tpet_0262 - hypothetical protein 263 51.06 +1 251237..252370 - 377 148269408 - Tpet_0263 - DegT/DnrJ/EryC1/StrS aminotransferase 264 49.55 +1 252367..253137 - 256 148269409 - Tpet_0264 - TatD family hydrolase 265 50.98 +1 253302..253964 + 220 148269410 - Tpet_0265 - serine O-acetyltransferase 266 52.85 +2 253879..254754 + 291 148269411 - Tpet_0266 - cysteine synthase A 267 49.31 +1 254751..255182 + 143 148269412 - Tpet_0267 - hypothetical protein 268 51.24 +1 255121..256689 + 522 148269413 - Tpet_0268 - metallo-beta-lactamase superfamily hydrolase-like protein 269 48.37 0 256723..256968 + 81 148269414 - Tpet_0269 - acyl carrier protein 270 49.15 0 256975..257910 - 311 148269415 - Tpet_0270 - hypothetical protein 271 52.02 +1 257901..258692 - 263 148269416 - Tpet_0271 - hypothetical protein 272 53.09 +2 258852..259013 - 53 148269417 - Tpet_0272 - rubredoxin-type Fe(Cys)4 protein 273 47.98 0 259024..259419 - 131 148269418 - Tpet_0273 - superoxide reductase 274 51.66 +1 259432..259944 - 170 148269419 - Tpet_0274 - rubrerythrin 275 45.33 0 260190..260756 + 188 148269420 - Tpet_0275 - cupin 2 domain-containing protein 276 51.15 +1 260781..261173 + 130 148269421 - Tpet_0276 - adenosylmethionine decarboxylase 277 51.40 +1 261178..262068 + 296 148269422 - Tpet_0277 - spermidine synthase 278 53.23 +2 262142..263473 + 443 148269423 - Tpet_0278 - RNA modification protein 279 47.15 0 263436..264296 + 286 148269424 - Tpet_0279 - phospholipase D/transphosphatidylase 280 50.19 +1 264283..265077 + 264 148269425 - Tpet_0280 - Cof-like hydrolase 281 48.90 0 265004..265774 + 256 148269426 - Tpet_0281 - hypothetical protein 282 47.22 0 265776..266135 - 119 148269427 - Tpet_0282 - DNA polymerase beta subunit 283 50.72 +1 266117..266599 - 160 148269428 - Tpet_0283 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 284 47.04 0 266666..267511 + 281 148269429 - Tpet_0284 - NAD+ synthetase 285 46.64 0 267538..269469 + 643 148269430 - Tpet_0285 - lipopolysaccharide biosynthesis protein 286 45.67 0 269499..270965 - 488 148269431 - Tpet_0286 - peptidase C11, clostripain 287 49.72 +1 270979..272406 - 475 148269432 - Tpet_0287 - hypothetical protein 288 47.88 0 272411..273022 - 203 148269433 - Tpet_0288 - HAD family hydrolase 289 51.87 +1 273012..274214 - 400 148269434 - Tpet_0289 - hypothetical protein 290 52.64 +2 274216..277194 - 992 148269435 - Tpet_0290 - polysaccharide export protein 291 51.69 +1 277348..277614 + 88 148269436 - Tpet_0291 - hypothetical protein 292 47.14 0 277629..277838 + 69 148269437 - Tpet_0292 - hypothetical protein 293 52.56 +2 277857..278090 + 77 148269438 - Tpet_0293 - hypothetical protein 294 43.31 0 278083..278463 + 126 148269439 - Tpet_0294 - hypothetical protein 295 45.10 0 278506..278913 + 135 148269440 - Tpet_0295 - mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 296 44.09 0 278939..280165 + 408 148269441 - Tpet_0296 - sugar transferase 297 39.78 -1 280144..281259 + 371 148269442 - Tpet_0297 - glycosyl transferase, group 1 298 37.17 -2 281441..282508 + 355 148269443 - Tpet_0298 - hypothetical protein 299 41.92 -1 282718..283881 + 387 148269444 - Tpet_0299 - glycosyl transferase, group 1 300 46.76 0 283886..284965 + 359 148269445 - Tpet_0300 - UDP-N-acetylglucosamine 2-epimerase 301 43.86 0 285001..285171 + 56 148269446 - Tpet_0301 - hypothetical protein 302 40.83 -1 285233..285352 + 39 148269447 - Tpet_0302 - WD-40 repeat-containing protein 303 48.66 0 285371..285781 + 136 148269448 - Tpet_0303 - HEPN domain-containing protein 304 43.30 0 285732..286082 + 116 148269449 - Tpet_0304 - DNA polymerase beta subunit 305 45.94 0 286137..287294 - 385 148269450 - Tpet_0305 - ATPase 306 40.53 -1 287629..289032 - 467 148269451 - Tpet_0306 - polysaccharide biosynthesis protein 307 43.16 0 289034..290224 - 396 148269452 - Tpet_0307 - glycosyl transferase, group 1 308 44.48 0 290245..291303 - 352 148269453 - Tpet_0308 - UDP-N-acetylglucosamine 2-epimerase 309 42.01 -1 291300..292394 - 364 148269454 - Tpet_0309 - hypothetical protein 310 52.60 +2 292400..293110 - 236 148269455 - Tpet_0310 - hypothetical protein 311 48.63 0 293110..293985 - 291 148269456 - Tpet_0311 - beta-lactamase domain-containing protein 312 47.41 0 294103..294450 + 115 148269457 - Tpet_0312 - hypothetical protein 313 42.98 0 294476..294703 - 75 148269458 - Tpet_0313 - ribosomal protein S18 314 47.18 0 294718..295143 - 141 148269459 - Tpet_0314 - single-strand binding protein 315 46.77 0 295143..295529 - 128 148269460 - Tpet_0315 - ribosomal protein S6 316 44.74 0 295606..296061 - 151 148269461 - Tpet_0316 - iron dependent repressor 317 45.18 0 296082..296444 - 120 148269462 - Tpet_0317 - hypothetical protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0