version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 184 40.85 -1 179308..179733 + 141 148269329 - Tpet_0184 - hypothetical protein 185 45.21 0 179740..180960 + 406 148269330 - Tpet_0185 - glycosyl transferase, group 1 186 49.77 +1 180966..181610 + 214 148269331 - Tpet_0186 - hypothetical protein 187 42.86 0 181610..182239 + 209 148269332 - Tpet_0187 - metallophosphoesterase 188 47.53 0 182241..182726 + 161 148269333 - Tpet_0188 - pantetheine-phosphate adenylyltransferase 189 47.89 0 182723..184645 + 640 148269334 - Tpet_0189 - threonyl-tRNA synthetase 190 45.00 0 184648..185487 + 279 148269335 - Tpet_0190 - metal dependent phosphohydrolase 191 46.71 0 185467..185952 - 161 148269336 - Tpet_0191 - hypothetical protein 192 43.22 0 185964..187136 - 390 148269337 - Tpet_0192 - hypothetical protein 193 46.12 0 187142..187978 - 278 148269338 - Tpet_0193 - mannose-6-phosphate isomerase, type I 194 43.64 0 187975..189342 - 455 148269339 - Tpet_0194 - hypothetical protein 195 46.79 0 189358..190665 - 435 148269340 - Tpet_0195 - tRNA (uracil-5-)-methyltransferase Gid 196 46.23 0 190670..191080 - 136 148269341 - Tpet_0196 - putative anti-sigma regulatory factor, serine/threonine protein kinase 197 45.82 0 191077..191829 - 250 148269342 - Tpet_0197 - hypothetical protein 198 44.74 0 191816..192385 - 189 148269343 - Tpet_0198 - hypothetical protein 199 46.22 0 192396..192845 - 149 148269344 - Tpet_0199 - D-tyrosyl-tRNA deacylase 200 44.66 0 192842..194986 - 714 148269345 - Tpet_0200 - (p)ppGpp synthetase I, SpoT/RelA 201 45.01 0 195370..196200 - 276 148269346 - Tpet_0201 - hypothetical protein 202 47.40 0 196184..197491 - 435 148269347 - Tpet_0202 - peptidase U62, modulator of DNA gyrase 203 51.55 +1 197488..198876 - 462 148269348 - Tpet_0203 - peptidase U62, modulator of DNA gyrase 204 48.37 0 198986..199843 + 285 148269349 - Tpet_0204 - hypothetical protein 205 46.99 0 199840..200769 - 309 148269350 - Tpet_0205 - CaCA family Na(+)/Ca(+) antiporter 206 50.71 +1 200777..201196 - 139 148269351 - Tpet_0206 - hypothetical protein 207 47.68 0 201193..203325 - 710 148269352 - Tpet_0207 - ribonuclease R 208 50.48 +1 203340..203969 - 209 148269353 - Tpet_0208 - uracil phosphoribosyltransferase 209 51.01 +1 203966..205249 - 427 148269354 - Tpet_0209 - serine hydroxymethyltransferase 210 48.52 0 205261..206643 - 460 148269355 - Tpet_0210 - cysteinyl-tRNA synthetase 211 47.90 0 206661..207113 - 150 148269356 - Tpet_0211 - putative CheW protein 212 42.61 -1 207126..207524 - 132 148269357 - Tpet_0212 - biotin/lipoyl attachment domain-containing protein 213 41.18 -1 207500..207805 - 101 148269358 - Tpet_0213 - hypothetical protein 214 50.06 +1 207815..209362 - 515 148269359 - Tpet_0214 - carboxyl transferase 215 47.45 0 209364..211955 - 863 148269360 - Tpet_0215 - CBS domain-containing protein 216 43.37 0 211956..212573 - 205 148269361 - Tpet_0216 - hypothetical protein 217 45.40 0 212570..213265 - 231 148269362 - Tpet_0217 - hypothetical protein 218 48.62 0 213310..214068 - 252 148269363 - Tpet_0218 - patatin 219 46.26 0 214071..215285 - 404 148269364 - Tpet_0219 - S-layer domain-containing protein 220 46.76 0 215346..215777 - 143 148269365 - Tpet_0220 - MarR family transcriptional regulator 221 47.53 0 215782..216450 - 222 148269366 - Tpet_0221 - uroporphyrin-III C/tetrapyrrole methyltransferase 222 48.10 0 216452..217162 - 236 148269367 - Tpet_0222 - biotin/lipoate A/B protein ligase 223 44.69 0 217159..217845 - 228 148269368 - Tpet_0223 - methyltransferase GidB 224 44.39 0 217893..220451 + 852 148269369 - Tpet_0224 - hypothetical protein 225 47.64 0 220457..221134 + 225 148269370 - Tpet_0225 - ABC transporter related 226 47.48 0 221098..222051 - 317 148269371 - Tpet_0226 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 227 46.94 0 222094..223320 + 408 148269372 - Tpet_0227 - competence/damage-inducible protein CinA 228 43.95 0 223317..225332 + 671 148269373 - Tpet_0228 - CheA signal transduction histidine kinase 229 40.79 -1 225338..225793 + 151 148269374 - Tpet_0229 - putative CheW protein 230 47.38 0 225797..226159 + 120 148269375 - Tpet_0230 - response regulator receiver protein 231 40.48 -1 226166..226459 + 97 148269376 - Tpet_0231 - hypothetical protein 232 44.40 0 226456..227205 + 249 148269377 fliP Tpet_0232 - flagellar biosynthesis protein FliP 233 47.19 0 227212..227478 + 88 148269378 - Tpet_0233 - flagellar biosynthetic protein FliQ 234 48.47 0 227491..228144 + 217 148269379 - Tpet_0234 - hypothetical protein 235 48.20 0 228162..228773 - 203 148269380 - Tpet_0235 - ATP-dependent Clp protease, proteolytic subunit ClpP 236 46.24 0 228745..230022 - 425 148269381 - Tpet_0236 - trigger factor domain-containing protein 237 39.56 -1 230049..230321 - 90 148269382 - Tpet_0237 - hypothetical protein 238 42.94 0 230327..230836 - 169 148269383 - Tpet_0238 - holo-acyl-carrier-protein synthase 239 46.70 0 230833..231483 - 216 148269384 - Tpet_0239 - methyltransferase type 11 240 44.22 0 231480..231929 - 149 148269385 - Tpet_0240 - GatB/Yqey domain-containing protein 241 47.13 0 231975..232706 - 243 148269386 - Tpet_0241 - Triose-phosphate isomerase 242 50.17 +1 232739..233938 - 399 148269387 - Tpet_0242 - phosphoglycerate kinase 243 50.40 +1 233991..234992 - 333 148269388 - Tpet_0243 - glyceraldehyde-3-phosphate dehydrogenase, type I 244 45.38 0 235009..235365 - 118 148269389 - Tpet_0244 - hypothetical protein 245 46.35 0 235367..236803 - 478 148269390 - Tpet_0245 - DNA polymerase III, subunits gamma and tau 246 44.44 0 236868..237461 + 197 148269391 - Tpet_0246 - lytic transglycosylase, catalytic 247 45.78 0 237458..237931 - 157 148269392 - Tpet_0247 - tartrate dehydratase subunit beta 248 48.38 0 237928..238545 - 205 148269393 - Tpet_0248 - peptidase M50 249 44.48 0 238539..239489 - 316 148269394 - Tpet_0249 - polysaccharide pyruvyl transferase 250 46.42 0 239552..240292 + 246 148269395 - Tpet_0250 - beta-lactamase domain-containing protein 251 46.97 0 240282..241322 - 346 148269396 - Tpet_0251 - CheC, inhibitor of MCP methylation 252 45.39 0 241319..242305 - 328 148269397 - Tpet_0252 - flagellar motor switch protein FliM 253 49.02 0 242315..242824 - 169 148269398 - Tpet_0253 - flagellar basal body-associated protein FliL 254 44.75 0 242834..243700 - 288 148269399 - Tpet_0254 - OmpA/MotB domain-containing protein 255 47.28 0 243700..244488 - 262 148269400 - Tpet_0255 - MotA/TolQ/ExbB proton channel 256 43.14 0 244493..244696 - 67 148269401 - Tpet_0256 - flagellar FlbD family protein 257 48.77 0 244703..246574 - 623 148269402 - Tpet_0257 - hypothetical protein 258 46.81 0 246574..247248 - 224 148269403 - Tpet_0258 - flagellar hook capping protein 259 41.02 -1 247245..249221 - 658 148269404 - Tpet_0259 - flagellar hook-length control protein 260 45.79 0 249248..250162 - 304 148269405 - Tpet_0260 - hypothetical protein 261 44.64 0 250275..250619 + 114 148269406 - Tpet_0261 - hypothetical protein 262 49.08 0 250644..251240 + 198 148269407 - Tpet_0262 - hypothetical protein 263 51.06 +1 251237..252370 - 377 148269408 - Tpet_0263 - DegT/DnrJ/EryC1/StrS aminotransferase 264 49.55 +1 252367..253137 - 256 148269409 - Tpet_0264 - TatD family hydrolase 265 50.98 +1 253302..253964 + 220 148269410 - Tpet_0265 - serine O-acetyltransferase 266 52.85 +2 253879..254754 + 291 148269411 - Tpet_0266 - cysteine synthase A 267 49.31 +1 254751..255182 + 143 148269412 - Tpet_0267 - hypothetical protein 268 51.24 +1 255121..256689 + 522 148269413 - Tpet_0268 - metallo-beta-lactamase superfamily hydrolase-like protein 269 48.37 0 256723..256968 + 81 148269414 - Tpet_0269 - acyl carrier protein 270 49.15 0 256975..257910 - 311 148269415 - Tpet_0270 - hypothetical protein 271 52.02 +1 257901..258692 - 263 148269416 - Tpet_0271 - hypothetical protein 272 53.09 +2 258852..259013 - 53 148269417 - Tpet_0272 - rubredoxin-type Fe(Cys)4 protein 273 47.98 0 259024..259419 - 131 148269418 - Tpet_0273 - superoxide reductase 274 51.66 +1 259432..259944 - 170 148269419 - Tpet_0274 - rubrerythrin 275 45.33 0 260190..260756 + 188 148269420 - Tpet_0275 - cupin 2 domain-containing protein 276 51.15 +1 260781..261173 + 130 148269421 - Tpet_0276 - adenosylmethionine decarboxylase 277 51.40 +1 261178..262068 + 296 148269422 - Tpet_0277 - spermidine synthase 278 53.23 +2 262142..263473 + 443 148269423 - Tpet_0278 - RNA modification protein 279 47.15 0 263436..264296 + 286 148269424 - Tpet_0279 - phospholipase D/transphosphatidylase 280 50.19 +1 264283..265077 + 264 148269425 - Tpet_0280 - Cof-like hydrolase 281 48.90 0 265004..265774 + 256 148269426 - Tpet_0281 - hypothetical protein 282 47.22 0 265776..266135 - 119 148269427 - Tpet_0282 - DNA polymerase beta subunit 283 50.72 +1 266117..266599 - 160 148269428 - Tpet_0283 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0