version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1686 47.72 0 1709468..1710475 + 335 148270831 - Tpet_1710 - histidinol-phosphate aminotransferase 1687 49.32 +1 1710472..1711059 + 195 148270832 - Tpet_1711 - imidazoleglycerol-phosphate dehydratase 1688 48.18 0 1711056..1711661 + 201 148270833 hisH Tpet_1712 - imidazole glycerol phosphate synthase subunit HisH 1689 47.25 0 1711640..1712365 + 241 148270834 - Tpet_1713 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1690 51.90 +1 1712355..1713119 + 254 148270835 - Tpet_1714 - imidazoleglycerol phosphate synthase, cyclase subunit 1691 48.05 0 1713116..1713706 + 196 148270836 - Tpet_1715 - phosphoribosyl-ATP pyrophosphohydrolase 1692 48.86 0 1713707..1714846 - 379 148270837 - Tpet_1716 - UDP-N-acetylglucosamine 2-epimerase 1693 47.12 0 1714890..1715897 + 335 148270838 - Tpet_1717 - mannose-1-phosphate guanylyltransferase (GDP) 1694 45.86 0 1715872..1716981 - 369 148270839 - Tpet_1718 - major facilitator transporter 1695 45.68 0 1717126..1717368 + 80 148270840 - Tpet_1719 - YruB family glutaredoxin-like protein 1696 41.29 -1 1717390..1717992 - 200 148270841 - Tpet_1720 - TetR family transcriptional regulator 1697 43.56 0 1718003..1718794 - 263 148270842 - Tpet_1721 - hypothetical protein 1698 44.67 0 1718791..1719672 - 293 148270843 - Tpet_1722 - ABC transporter related 1699 40.05 -1 1719781..1720152 - 123 148270844 - Tpet_1723 - hypothetical protein 1700 40.57 -1 1720154..1720678 - 174 148270845 - Tpet_1724 - integral membrane protein-like protein 1701 47.64 0 1720776..1721537 + 253 148270846 - Tpet_1725 - esterase/lipase-like protein 1702 48.50 0 1721540..1722805 + 421 148270847 - Tpet_1726 - major facilitator transporter 1703 45.07 0 1722830..1723681 + 283 148270848 - Tpet_1727 - hypothetical protein 1704 31.32 -2 1723723..1724169 + 148 148270849 - Tpet_1728 - hypothetical protein 1705 37.24 -2 1724246..1724578 + 110 148270850 - Tpet_1729 - hypothetical protein 1706 48.36 0 1726186..1727436 + 416 148270851 - Tpet_1731 - Glu/Leu/Phe/Val dehydrogenase, C terminal 1707 49.52 +1 1727472..1729244 - 590 148270852 - Tpet_1732 - hypothetical protein 1708 44.32 0 1729299..1731809 - 836 148270853 - Tpet_1733 - hypothetical protein 1709 33.25 -2 1732365..1733600 + 411 148270854 - Tpet_1735 - hypothetical protein 1710 30.48 -2 1733593..1734363 + 256 148270855 - Tpet_1736 - hypothetical protein 1711 37.68 -2 1734674..1735087 - 137 148270856 - Tpet_1737 - hypothetical protein 1712 47.14 0 1736115..1737266 + 383 148270857 - Tpet_1739 - ATPase 1713 50.00 +1 1737281..1737688 - 135 148270858 - Tpet_1740 - cupin 2 domain-containing protein 1714 41.30 -1 1737703..1739598 - 631 148270859 - Tpet_1741 - esterase/lipase-like protein 1715 47.74 0 1739617..1740477 - 286 148270860 - Tpet_1742 - 2,5-didehydrogluconate reductase 1716 47.26 0 1740586..1741590 - 334 148270861 - Tpet_1743 - aldo/keto reductase 1717 46.89 0 1741719..1742618 + 299 148270862 - Tpet_1744 - AraC-like transcriptional regulator 1718 46.08 0 1743244..1744545 + 433 148270863 - Tpet_1746 - putative PAS/PAC sensor protein 1719 39.76 -1 1744685..1745011 + 108 148270864 - Tpet_1747 - regulatory protein, ArsR 1720 47.84 0 1745017..1746105 + 362 148270865 - Tpet_1748 - permease 1721 46.91 0 1746119..1746361 + 80 148270866 - Tpet_1749 - redox-active disulfide protein 2 1722 30.30 -2 1746753..1746884 + 43 148270867 - Tpet_1750 - hypothetical protein 1723 34.58 -2 1747153..1749324 + 723 148270868 - Tpet_1751 - phosphoadenosine phosphosulfate reductase 1724 32.18 -2 1749551..1752922 + 1123 148270869 - Tpet_1752 - hypothetical protein 1725 28.32 -2 1752922..1755315 + 797 148270870 - Tpet_1753 - hypothetical protein 1726 33.19 -2 1755312..1756733 + 473 148270871 - Tpet_1754 - hypothetical protein 1727 51.47 +1 1756905..1757786 - 293 148270872 - Tpet_1755 - hypothetical protein 1728 50.77 +1 1757803..1758255 - 150 148270873 - Tpet_1756 - hypothetical protein 1729 48.49 0 1758233..1762837 - 1534 148270874 - Tpet_1757 - alpha-2-macroglobulin domain-containing protein 1730 47.08 0 1763043..1763282 + 79 148270875 - Tpet_1758 - SirA family protein 1731 49.95 +1 1763298..1764296 + 332 148270876 - Tpet_1759 - protein of unknown function DUF395, YeeE/YedE 1732 42.30 -1 1764313..1764669 + 118 148270877 - Tpet_1760 - DsrE family protein 1733 43.22 0 1764679..1765032 + 117 148270878 - Tpet_1761 - hypothetical protein 1734 43.94 0 1765044..1765307 + 87 148270879 - Tpet_1762 - DsrH family protein 1735 44.32 0 1765389..1765934 + 181 148270880 - Tpet_1763 - SirA family protein 1736 41.65 -1 1766622..1767932 + 436 148270881 - Tpet_1765 - metal dependent phosphohydrolase 1737 41.75 -1 1767957..1769774 + 605 148270882 - Tpet_1766 - methyl-accepting chemotaxis sensory transducer 1738 40.12 -1 1770053..1771423 + 456 148270883 - Tpet_1767 - ATPase 1739 41.37 -1 1771464..1773218 + 584 148270884 - Tpet_1768 - hypothetical protein 1740 36.85 -2 1773271..1774665 - 464 148270885 - Tpet_1769 - type III restriction enzyme, res subunit 1741 37.44 -2 1774646..1774864 - 72 148270886 - Tpet_1770 - hypothetical protein 1742 34.31 -2 1774866..1775273 - 135 148270887 - Tpet_1771 - hypothetical protein 1743 38.02 -2 1775297..1778047 - 916 148270888 - Tpet_1772 - adenine-specific DNA methylase 1744 34.64 -2 1778044..1779111 - 355 148270889 - Tpet_1773 - hypothetical protein 1745 39.64 -1 1779184..1779405 - 73 148270890 - Tpet_1774 - hypothetical protein 1746 36.34 -2 1779490..1780386 - 298 148270891 - Tpet_1775 - alkaline phosphatase domain-containing protein 1747 35.13 -2 1780376..1782820 - 814 148270892 - Tpet_1776 - AAA family ATPase 1748 45.03 0 1782987..1784285 - 432 148270893 - Tpet_1777 - putative PAS/PAC sensor protein 1749 44.74 0 1784464..1788522 + 1352 148270894 - Tpet_1778 - alpha-2-macroglobulin domain-containing protein 1750 41.98 -1 1788651..1789298 + 215 148270895 - Tpet_1779 - diguanylate cyclase 1751 46.95 0 1789320..1790090 + 256 148270896 - Tpet_1780 - phage integrase family protein 1752 44.73 0 1790266..1791072 - 268 148270897 - Tpet_1781 - ExsB family protein 1753 47.88 0 1791069..1791824 - 251 148270898 - Tpet_1782 - NCAIR mutase (PurE)-related protein-like protein 1754 48.07 0 1791817..1793010 - 397 148270899 - Tpet_1783 - hypothetical protein 1755 46.27 0 1793149..1794795 + 548 148270900 - Tpet_1784 - M3 family oligoendopeptidase 1756 43.48 0 1794921..1796438 + 505 148270901 - Tpet_1785 - DNA mismatch repair protein MutS domain-containing protein 1757 42.10 -1 1796435..1797940 + 501 148270902 - Tpet_1786 - DNA mismatch repair protein MutS domain-containing protein 1758 50.35 +1 1797926..1798642 - 238 148270903 - Tpet_1787 - hypothetical protein 1759 47.21 0 1798642..1799268 - 208 148270904 - Tpet_1788 - LemA family protein 1760 45.30 0 1799443..1800336 + 297 148270905 - Tpet_1789 - ribokinase 1761 41.81 -1 1800333..1801346 + 337 148270906 - Tpet_1790 - periplasmic binding protein/LacI transcriptional regulator 1762 40.44 -1 1801324..1801731 + 135 148270907 - Tpet_1791 - D-ribose pyranase 1763 40.67 -1 1801728..1803212 + 494 148270908 - Tpet_1792 - ABC transporter related 1764 43.21 0 1803209..1804129 + 306 148270909 - Tpet_1793 - monosaccharide-transporting ATPase 1765 45.05 0 1804160..1805047 + 295 148270910 - Tpet_1794 - monosaccharide-transporting ATPase 1766 44.78 0 1805085..1805774 - 229 148270911 - Tpet_1795 - radical SAM domain-containing protein 1767 47.96 0 1805795..1806553 + 252 148270912 - Tpet_1796 - hypothetical protein 1768 47.01 0 1806810..1808081 + 423 148270913 - Tpet_1797 - PhoPQ-activated pathogenicity-related protein-like protein 1769 46.19 0 1808137..1809054 - 305 148270914 - Tpet_1798 - hypothetical protein 1770 46.89 0 1809105..1810424 - 439 148270915 - Tpet_1799 - glutamine synthetase, type I 1771 44.18 0 1810607..1811878 - 423 148270916 - Tpet_1800 - hypothetical protein 1772 46.80 0 1811850..1813082 - 410 148270917 - Tpet_1801 - hypothetical protein 1773 45.57 0 1813058..1813972 - 304 148270918 - Tpet_1802 - RluA family pseudouridine synthase 1774 46.96 0 1813978..1814322 - 114 148270919 - Tpet_1803 - aspartate alpha-decarboxylase 1775 44.44 0 1814352..1815152 + 266 148270920 - Tpet_1804 - methyltransferase type 12 1776 49.86 +1 1815149..1815505 + 118 148270921 - Tpet_1805 - PadR-like family transcriptional regulator 1777 46.68 0 1815493..1816713 - 406 148270922 - Tpet_1806 - amidohydrolase 1778 43.84 0 1816710..1817147 - 145 148270923 - Tpet_1807 - signal-transduction protein 1779 44.99 0 1817157..1818434 - 425 148270924 - Tpet_1808 - citrate transporter 1780 45.64 0 1818462..1819631 + 389 148270925 - Tpet_1809 - hypothetical protein 1781 46.21 0 1819612..1820046 - 144 148270926 - Tpet_1810 - restriction endonuclease 1782 40.69 -1 1820036..1820443 - 135 148270927 - Tpet_1811 - hypothetical protein 1783 47.06 0 1820511..1821566 + 351 148270928 - Tpet_1812 - ATPase 1784 47.74 0 1821563..1822756 + 397 148270929 - Tpet_1813 - hypothetical protein 1785 43.05 0 1822753..1823493 + 246 148270930 - Tpet_1814 - hypothetical protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0