version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1645 52.41 +1 1662850..1663761 + 303 148270790 - Tpet_1669 - ExsB family protein 1646 48.56 0 1663833..1666793 - 986 148270791 - Tpet_1670 - glycoside hydrolase family protein 1647 49.90 +1 1666790..1668220 - 476 148270792 - Tpet_1671 - carbohydrate kinase, FGGY 1648 49.93 +1 1668211..1668921 - 236 148270793 - Tpet_1672 - rhamnulose-1-phosphate aldolase 1649 49.26 0 1668918..1670066 - 382 148270794 - Tpet_1673 - L-rhamnose isomerase 1650 42.03 -1 1670066..1670410 - 114 148270795 - Tpet_1674 - hypothetical protein 1651 42.57 -1 1670476..1671276 + 266 148270796 - Tpet_1675 - DeoR family transcriptional regulator 1652 49.82 +1 1671301..1672701 + 466 148270797 - Tpet_1676 - glycoside hydrolase family protein 1653 45.27 0 1672949..1674916 + 655 148270798 - Tpet_1677 - extracellular solute-binding protein 1654 48.14 0 1675035..1676891 + 618 148270799 - Tpet_1678 - FG-GAP repeat-containing protein 1655 46.45 0 1676917..1678197 + 426 148270800 - Tpet_1679 - extracellular solute-binding protein 1656 42.02 -1 1678238..1679089 + 283 148270801 - Tpet_1680 - binding-protein-dependent transport systems inner membrane component 1657 41.17 -1 1679093..1679896 + 267 148270802 - Tpet_1681 - binding-protein-dependent transport systems inner membrane component 1658 42.42 -1 1680090..1682720 + 876 148270803 - Tpet_1682 - alpha-L-rhamnosidase 1659 50.91 +1 1682714..1683697 + 327 148270804 - Tpet_1683 - binding-protein-dependent transport systems inner membrane component 1660 48.91 0 1683708..1684811 + 367 148270805 - Tpet_1684 - binding-protein-dependent transport systems inner membrane component 1661 49.50 +1 1684823..1685818 + 331 148270806 - Tpet_1685 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1662 48.19 0 1685805..1686827 + 340 148270807 - Tpet_1686 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1663 46.02 0 1686824..1688818 + 664 148270808 - Tpet_1687 - extracellular solute-binding protein 1664 42.89 0 1688853..1690076 + 407 148270809 - Tpet_1688 - hypothetical protein 1665 47.70 0 1690094..1691785 + 563 148270810 - Tpet_1689 - Beta-glucuronidase 1666 44.85 0 1691791..1692945 + 384 148270811 - Tpet_1690 - hypothetical protein 1667 44.77 0 1693028..1694365 + 445 148270812 - Tpet_1691 - major facilitator transporter 1668 51.14 +1 1694414..1694677 + 87 148270813 - Tpet_1692 - stage V sporulation protein S 1669 48.03 0 1694719..1696317 - 532 148270814 - Tpet_1693 - ferredoxin-dependent glutamate synthase 1670 46.45 0 1696440..1697438 + 332 148270815 - Tpet_1694 - TrkA domain-containing protein 1671 44.12 0 1697440..1697745 + 101 148270816 - Tpet_1695 - CutA1 divalent ion tolerance protein 1672 49.03 0 1697726..1698241 - 171 148270817 - Tpet_1696 - hypothetical protein 1673 45.10 0 1698238..1698951 - 237 148270818 - Tpet_1697 - ABC transporter related 1674 43.12 0 1698948..1699427 - 159 148270819 - Tpet_1698 - outer membrane chaperone Skp (OmpH) 1675 44.14 0 1699442..1699987 - 181 148270820 - Tpet_1699 - helix-hairpin-helix repeat-containing competence protein ComEA 1676 46.44 0 1699984..1700685 - 233 148270821 - Tpet_1700 - hypothetical protein 1677 49.40 +1 1700689..1701684 - 331 148270822 - Tpet_1701 - peptidase M42 family protein 1678 47.35 0 1701681..1702700 - 339 148270823 - Tpet_1702 - cellulase 1679 47.75 0 1702704..1703702 - 332 148270824 - Tpet_1703 - peptidase M42 family protein 1680 48.50 0 1703705..1704337 - 210 148270825 - Tpet_1704 - septum site-determining protein MinC 1681 46.27 0 1704397..1705254 + 285 148270826 - Tpet_1705 - alpha/beta hydrolase fold 1682 45.02 0 1705237..1706502 - 421 148270827 - Tpet_1706 - citrate transporter 1683 47.01 0 1706775..1707593 + 272 148270828 - Tpet_1707 - histidyl-tRNA synthetase-like protein 1684 46.73 0 1707587..1708213 + 208 148270829 - Tpet_1708 - ATP phosphoribosyltransferase 1685 50.04 +1 1708185..1709471 + 428 148270830 - Tpet_1709 - histidinol dehydrogenase 1686 47.72 0 1709468..1710475 + 335 148270831 - Tpet_1710 - histidinol-phosphate aminotransferase 1687 49.32 +1 1710472..1711059 + 195 148270832 - Tpet_1711 - imidazoleglycerol-phosphate dehydratase 1688 48.18 0 1711056..1711661 + 201 148270833 hisH Tpet_1712 - imidazole glycerol phosphate synthase subunit HisH 1689 47.25 0 1711640..1712365 + 241 148270834 - Tpet_1713 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1690 51.90 +1 1712355..1713119 + 254 148270835 - Tpet_1714 - imidazoleglycerol phosphate synthase, cyclase subunit 1691 48.05 0 1713116..1713706 + 196 148270836 - Tpet_1715 - phosphoribosyl-ATP pyrophosphohydrolase 1692 48.86 0 1713707..1714846 - 379 148270837 - Tpet_1716 - UDP-N-acetylglucosamine 2-epimerase 1693 47.12 0 1714890..1715897 + 335 148270838 - Tpet_1717 - mannose-1-phosphate guanylyltransferase (GDP) 1694 45.86 0 1715872..1716981 - 369 148270839 - Tpet_1718 - major facilitator transporter 1695 45.68 0 1717126..1717368 + 80 148270840 - Tpet_1719 - YruB family glutaredoxin-like protein 1696 41.29 -1 1717390..1717992 - 200 148270841 - Tpet_1720 - TetR family transcriptional regulator 1697 43.56 0 1718003..1718794 - 263 148270842 - Tpet_1721 - hypothetical protein 1698 44.67 0 1718791..1719672 - 293 148270843 - Tpet_1722 - ABC transporter related 1699 40.05 -1 1719781..1720152 - 123 148270844 - Tpet_1723 - hypothetical protein 1700 40.57 -1 1720154..1720678 - 174 148270845 - Tpet_1724 - integral membrane protein-like protein 1701 47.64 0 1720776..1721537 + 253 148270846 - Tpet_1725 - esterase/lipase-like protein 1702 48.50 0 1721540..1722805 + 421 148270847 - Tpet_1726 - major facilitator transporter 1703 45.07 0 1722830..1723681 + 283 148270848 - Tpet_1727 - hypothetical protein 1704 31.32 -2 1723723..1724169 + 148 148270849 - Tpet_1728 - hypothetical protein 1705 37.24 -2 1724246..1724578 + 110 148270850 - Tpet_1729 - hypothetical protein 1706 48.36 0 1726186..1727436 + 416 148270851 - Tpet_1731 - Glu/Leu/Phe/Val dehydrogenase, C terminal 1707 49.52 +1 1727472..1729244 - 590 148270852 - Tpet_1732 - hypothetical protein 1708 44.32 0 1729299..1731809 - 836 148270853 - Tpet_1733 - hypothetical protein 1709 33.25 -2 1732365..1733600 + 411 148270854 - Tpet_1735 - hypothetical protein 1710 30.48 -2 1733593..1734363 + 256 148270855 - Tpet_1736 - hypothetical protein 1711 37.68 -2 1734674..1735087 - 137 148270856 - Tpet_1737 - hypothetical protein 1712 47.14 0 1736115..1737266 + 383 148270857 - Tpet_1739 - ATPase 1713 50.00 +1 1737281..1737688 - 135 148270858 - Tpet_1740 - cupin 2 domain-containing protein 1714 41.30 -1 1737703..1739598 - 631 148270859 - Tpet_1741 - esterase/lipase-like protein 1715 47.74 0 1739617..1740477 - 286 148270860 - Tpet_1742 - 2,5-didehydrogluconate reductase 1716 47.26 0 1740586..1741590 - 334 148270861 - Tpet_1743 - aldo/keto reductase 1717 46.89 0 1741719..1742618 + 299 148270862 - Tpet_1744 - AraC-like transcriptional regulator 1718 46.08 0 1743244..1744545 + 433 148270863 - Tpet_1746 - putative PAS/PAC sensor protein 1719 39.76 -1 1744685..1745011 + 108 148270864 - Tpet_1747 - regulatory protein, ArsR 1720 47.84 0 1745017..1746105 + 362 148270865 - Tpet_1748 - permease 1721 46.91 0 1746119..1746361 + 80 148270866 - Tpet_1749 - redox-active disulfide protein 2 1722 30.30 -2 1746753..1746884 + 43 148270867 - Tpet_1750 - hypothetical protein 1723 34.58 -2 1747153..1749324 + 723 148270868 - Tpet_1751 - phosphoadenosine phosphosulfate reductase 1724 32.18 -2 1749551..1752922 + 1123 148270869 - Tpet_1752 - hypothetical protein 1725 28.32 -2 1752922..1755315 + 797 148270870 - Tpet_1753 - hypothetical protein 1726 33.19 -2 1755312..1756733 + 473 148270871 - Tpet_1754 - hypothetical protein 1727 51.47 +1 1756905..1757786 - 293 148270872 - Tpet_1755 - hypothetical protein 1728 50.77 +1 1757803..1758255 - 150 148270873 - Tpet_1756 - hypothetical protein 1729 48.49 0 1758233..1762837 - 1534 148270874 - Tpet_1757 - alpha-2-macroglobulin domain-containing protein 1730 47.08 0 1763043..1763282 + 79 148270875 - Tpet_1758 - SirA family protein 1731 49.95 +1 1763298..1764296 + 332 148270876 - Tpet_1759 - protein of unknown function DUF395, YeeE/YedE 1732 42.30 -1 1764313..1764669 + 118 148270877 - Tpet_1760 - DsrE family protein 1733 43.22 0 1764679..1765032 + 117 148270878 - Tpet_1761 - hypothetical protein 1734 43.94 0 1765044..1765307 + 87 148270879 - Tpet_1762 - DsrH family protein 1735 44.32 0 1765389..1765934 + 181 148270880 - Tpet_1763 - SirA family protein 1736 41.65 -1 1766622..1767932 + 436 148270881 - Tpet_1765 - metal dependent phosphohydrolase 1737 41.75 -1 1767957..1769774 + 605 148270882 - Tpet_1766 - methyl-accepting chemotaxis sensory transducer 1738 40.12 -1 1770053..1771423 + 456 148270883 - Tpet_1767 - ATPase 1739 41.37 -1 1771464..1773218 + 584 148270884 - Tpet_1768 - hypothetical protein 1740 36.85 -2 1773271..1774665 - 464 148270885 - Tpet_1769 - type III restriction enzyme, res subunit 1741 37.44 -2 1774646..1774864 - 72 148270886 - Tpet_1770 - hypothetical protein 1742 34.31 -2 1774866..1775273 - 135 148270887 - Tpet_1771 - hypothetical protein 1743 38.02 -2 1775297..1778047 - 916 148270888 - Tpet_1772 - adenine-specific DNA methylase 1744 34.64 -2 1778044..1779111 - 355 148270889 - Tpet_1773 - hypothetical protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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