version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1483 48.45 0 1491720..1493141 - 473 148270628 thiH Tpet_1504 - thiamine biosynthesis protein ThiH 1484 49.80 +1 1493141..1493389 - 82 148270629 - Tpet_1505 - hypothetical protein 1485 42.70 -1 1493530..1494693 - 387 148270630 - Tpet_1506 - AAA ATPase 1486 47.39 0 1494918..1495742 + 274 148270631 - Tpet_1507 - phosphate binding protein 1487 52.54 +1 1495792..1496619 + 275 148270632 - Tpet_1508 - binding-protein-dependent transport systems inner membrane component 1488 51.02 +1 1496616..1497446 + 276 148270633 - Tpet_1509 - phosphate ABC transporter, inner membrane subunit PstA 1489 50.79 +1 1497430..1498185 + 251 148270634 - Tpet_1510 - phosphate ABC transporter, ATPase subunit 1490 47.50 0 1498200..1498898 + 232 148270635 - Tpet_1511 - phosphate uptake regulator, PhoU 1491 48.75 0 1498873..1499553 + 226 148270636 - Tpet_1512 - two component transcriptional regulator 1492 45.91 0 1499540..1500493 + 317 148270637 - Tpet_1513 - histidine kinase 1493 50.11 +1 1500486..1502321 - 611 148270638 - Tpet_1514 - ATPase-like protein 1494 46.83 0 1502326..1504059 - 577 148270639 - Tpet_1515 - ABC transporter related 1495 47.27 0 1504034..1505167 - 377 148270640 - Tpet_1516 - aminotransferase, class I and II 1496 48.08 0 1505276..1505926 + 216 148270641 - Tpet_1517 - HAD family hydrolase 1497 50.43 +1 1505910..1507640 - 576 148270642 - Tpet_1518 - NAD+ synthetase 1498 45.66 0 1507606..1508181 - 191 148270643 - Tpet_1519 - hypothetical protein 1499 51.18 +1 1508184..1509119 - 311 148270644 - Tpet_1520 - phosphoribosylaminoimidazole synthetase 1500 51.34 +1 1509116..1510309 - 397 148270645 - Tpet_1521 - phosphoribosylamine--glycine ligase 1501 50.85 +1 1510322..1511680 - 452 148270646 - Tpet_1522 - IMP cyclohydrolase 1502 50.74 +1 1511661..1512269 - 202 148270647 - Tpet_1523 - phosphoribosylglycinamide formyltransferase 1503 50.15 +1 1512239..1513534 - 431 148270648 - Tpet_1524 - amidophosphoribosyltransferase 1504 52.55 +1 1513539..1515344 - 601 148270649 - Tpet_1525 - phosphoribosylformylglycinamidine synthase II 1505 49.22 0 1515350..1515991 - 213 148270650 - Tpet_1526 - phosphoribosylformylglycinamidine synthase I 1506 47.79 0 1515988..1516236 - 82 148270651 - Tpet_1527 - phosphoribosylformylglycinamidine synthase, purS 1507 45.31 0 1516212..1516904 - 230 148270652 - Tpet_1528 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1508 44.92 0 1517222..1517644 + 140 148270653 - Tpet_1529 - hypothetical protein 1509 44.69 0 1517663..1518736 + 357 148270654 - Tpet_1530 - translation-associated GTPase 1510 54.20 +2 1518729..1519097 + 122 148270655 - Tpet_1531 - acid phosphatase/vanadium-dependent haloperoxidase related 1511 46.17 0 1519107..1521053 + 648 148270656 - Tpet_1532 - UvrD/REP helicase 1512 49.81 +1 1521058..1522125 - 355 148270657 - Tpet_1533 - radical SAM domain-containing protein 1513 52.13 +1 1522251..1523543 + 430 148270658 - Tpet_1534 - extracellular solute-binding protein 1514 46.81 0 1523588..1524433 + 281 148270659 - Tpet_1535 - binding-protein-dependent transport systems inner membrane component 1515 51.00 +1 1524430..1525227 + 265 148270660 - Tpet_1536 - binding-protein-dependent transport systems inner membrane component 1516 51.22 +1 1525241..1526308 + 355 148270661 - Tpet_1537 - ABC transporter related 1517 46.14 0 1526305..1528803 + 832 148270662 - Tpet_1538 - glycoside hydrolase family protein 1518 46.18 0 1528800..1530083 + 427 148270663 - Tpet_1539 - glycosyl transferase, group 1 1519 47.86 0 1530080..1531222 + 380 148270664 - Tpet_1540 - glycosyl transferase family protein 1520 49.31 +1 1531206..1532006 + 266 148270665 - Tpet_1541 - RpiR family transcriptional regulator 1521 48.80 0 1532164..1534167 + 667 148270666 - Tpet_1542 - carbohydrate binding module 27 1522 49.95 +1 1534170..1535150 + 326 148270667 - Tpet_1543 - glycosidase, PH1107-related 1523 45.89 0 1535164..1536270 + 368 148270668 - Tpet_1544 - ROK family protein 1524 49.40 +1 1536402..1538075 + 557 148270669 - Tpet_1545 - extracellular solute-binding protein 1525 45.45 0 1538131..1539120 + 329 148270670 - Tpet_1546 - binding-protein-dependent transport systems inner membrane component 1526 49.53 +1 1539117..1539974 + 285 148270671 - Tpet_1547 - binding-protein-dependent transport systems inner membrane component 1527 46.18 0 1539971..1540951 + 326 148270672 - Tpet_1548 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1528 45.68 0 1540948..1541895 + 315 148270673 - Tpet_1549 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1529 46.81 0 1541897..1542883 + 328 148270674 - Tpet_1550 - periplasmic binding protein/LacI transcriptional regulator 1530 48.81 0 1543354..1544529 + 391 148270675 - Tpet_1552 - extracellular solute-binding protein 1531 46.02 0 1544589..1546322 + 577 148270676 - Tpet_1553 - binding-protein-dependent transport systems inner membrane component 1532 43.41 0 1546322..1548793 + 823 148270677 - Tpet_1554 - binding-protein-dependent transport systems inner membrane component 1533 46.22 0 1548790..1550628 + 612 148270678 - Tpet_1555 - arabinogalactan endo-1,4-beta-galactosidase 1534 44.01 0 1550644..1551645 + 333 148270679 - Tpet_1556 - periplasmic binding protein/LacI transcriptional regulator 1535 47.54 0 1551703..1553652 + 649 148270680 - Tpet_1557 - Beta-galactosidase 1536 44.65 0 1553667..1554647 + 326 148270681 - Tpet_1558 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1537 48.51 0 1554653..1557907 + 1084 148270682 - Tpet_1559 - glycoside hydrolase family protein 1538 49.25 0 1557913..1559571 + 552 148270683 - Tpet_1560 - Alpha-galactosidase-like protein 1539 49.74 +1 1559568..1560524 + 318 148270684 - Tpet_1561 - galactose-1-phosphate uridylyltransferase 1540 47.10 0 1560521..1561573 + 350 148270685 - Tpet_1562 - galactokinase 1541 43.51 0 1561825..1563033 + 402 148270686 - Tpet_1563 - IS605 family transposase OrfB 1542 43.13 0 1563588..1564598 - 336 148270687 - Tpet_1565 - hypothetical protein 1543 44.93 0 1564642..1565607 + 321 148270688 - Tpet_1566 - hypothetical protein 1544 46.86 0 1565612..1565818 + 68 148270689 - Tpet_1567 - FmdB family regulatory protein 1545 47.70 0 1565815..1566315 - 166 148270690 mgsA Tpet_1568 - methylglyoxal synthase 1546 42.86 0 1566308..1568239 - 643 148270691 - Tpet_1569 - diguanylate cyclase with PAS/PAC sensor 1547 46.84 0 1568236..1569375 - 379 148270692 - Tpet_1570 - aldo/keto reductase 1548 44.92 0 1569449..1572961 + 1170 148270693 - Tpet_1571 - chromosome segregation protein SMC 1549 48.89 0 1572964..1573503 + 179 148270694 - Tpet_1572 - NUDIX hydrolase 1550 45.29 0 1573500..1574093 + 197 148270695 - Tpet_1573 - hypothetical protein 1551 48.31 0 1574105..1574518 + 137 148270696 - Tpet_1574 - flagellar protein FliS 1552 47.02 0 1574515..1575354 + 279 148270697 - Tpet_1575 - GCN5-related N-acetyltransferase 1553 45.58 0 1575351..1576028 + 225 148270698 - Tpet_1576 - HAD family hydrolase 1554 49.69 +1 1576068..1577363 - 431 148270699 - Tpet_1577 - hydroxylamine reductase 1555 44.06 0 1577453..1578058 + 201 148270700 - Tpet_1578 - CRP/FNR family transcriptional regulator 1556 45.72 0 1578076..1579932 + 618 148270701 - Tpet_1579 - metal dependent phosphohydrolase 1557 47.90 0 1579910..1580623 + 237 148270702 - Tpet_1580 - short-chain dehydrogenase/reductase SDR 1558 47.42 0 1580650..1583184 - 844 148270703 - Tpet_1581 - alpha-glucan phosphorylase 1559 42.58 -1 1583279..1583851 - 190 148270704 - Tpet_1582 - hypothetical protein 1560 43.29 0 1583848..1584972 - 374 148270705 - Tpet_1583 - putative oxygen-independent coproporphyrinogen III oxidase 1561 48.88 0 1584969..1585817 - 282 148270706 - Tpet_1584 - 2-oxoacid ferredoxin oxidoreductase subunit beta 1562 50.27 +1 1585818..1587494 - 558 148270707 - Tpet_1585 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1563 43.63 0 1587491..1588966 - 491 148270708 - Tpet_1586 - diguanylate cyclase 1564 46.99 0 1588979..1589659 - 226 148270709 - Tpet_1587 - beta-lactamase domain-containing protein 1565 45.56 0 1589867..1591207 + 446 148270710 - Tpet_1588 - response regulator receiver protein 1566 44.52 0 1591220..1592140 + 306 148270711 - Tpet_1589 - esterase/lipase-like protein 1567 47.95 0 1592145..1593095 + 316 148270712 - Tpet_1590 - hypothetical protein 1568 47.16 0 1593009..1593731 - 240 148270713 - Tpet_1591 - hypothetical protein 1569 45.32 0 1593744..1594427 - 227 148270714 - Tpet_1592 - glutamine amidotransferase class-I 1570 41.60 -1 1594429..1595226 - 265 148270715 - Tpet_1593 - hypothetical protein 1571 47.14 0 1595223..1595606 - 127 148270716 - Tpet_1594 - phage shock protein C, PspC 1572 45.54 0 1595695..1597185 + 496 148270717 - Tpet_1595 - glucose-6-phosphate 1-dehydrogenase 1573 45.55 0 1597170..1597832 + 220 148270718 - Tpet_1596 - 6-phosphogluconolactonase 1574 48.61 0 1597900..1598763 + 287 148270719 - Tpet_1597 - binding-protein-dependent transport systems inner membrane component 1575 48.15 0 1598760..1599731 + 323 148270720 - Tpet_1598 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1576 47.55 0 1599718..1600695 + 325 148270721 - Tpet_1599 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1577 47.34 0 1600711..1602216 + 501 148270722 - Tpet_1600 - extracellular solute-binding protein 1578 49.21 0 1602259..1603266 + 335 148270723 - Tpet_1601 - binding-protein-dependent transport systems inner membrane component 1579 48.92 0 1603287..1604486 - 399 148270724 - Tpet_1602 - isocitrate dehydrogenase 1580 44.39 0 1604646..1605305 - 219 148270725 - Tpet_1603 - thioredoxin-related protein-like protein 1581 46.54 0 1605321..1605971 - 216 148270726 - Tpet_1604 - cytochrome c biogenesis protein, transmembrane region 1582 45.37 0 1606061..1606708 - 215 148270727 - Tpet_1605 - CBS domain-containing protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0