version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1320 45.80 0 1327366..1327710 + 114 148270465 - Tpet_1335 - cupin 2 domain-containing protein 1321 46.98 0 1327839..1328153 + 104 148270466 - Tpet_1336 - ribosomal protein L21 1322 41.40 -1 1328150..1328434 + 94 148270467 - Tpet_1337 - hypothetical protein 1323 43.65 0 1328424..1328675 + 83 148270468 rpmA Tpet_1338 - 50S ribosomal protein L27 1324 46.38 0 1328665..1329231 + 188 148270469 - Tpet_1339 - membrane protein-like protein 1325 46.67 0 1329224..1329673 + 149 148270470 rplM Tpet_1340 - 50S ribosomal protein L13 1326 46.91 0 1329693..1330097 + 134 148270471 - Tpet_1341 - ribosomal protein S9 1327 43.11 0 1330548..1332245 + 565 148270472 - Tpet_1342 - DNA primase 1328 43.95 0 1332251..1333474 + 407 148270473 - Tpet_1343 - RpoD family RNA polymerase sigma factor 1329 44.30 0 1333490..1336171 - 893 148270474 - Tpet_1344 - transcription-repair coupling factor 1330 43.50 0 1336164..1336586 - 140 148270475 - Tpet_1345 - TPR repeat-containing protein 1331 42.39 -1 1336573..1338162 - 529 148270476 - Tpet_1346 - TPR repeat-containing protein 1332 48.05 0 1338167..1338757 - 196 148270477 - Tpet_1347 - hypothetical protein 1333 44.39 0 1338762..1340081 - 439 148270478 - Tpet_1348 - small GTP-binding protein 1334 43.57 0 1340084..1341715 - 543 148270479 - Tpet_1349 - RNA-binding S1 domain-containing protein 1335 45.05 0 1341702..1342529 - 275 148270480 - Tpet_1350 - hydroxymethylbutenyl pyrophosphate reductase 1336 48.72 0 1342526..1343188 - 220 148270481 - Tpet_1351 - cytidylate kinase 1337 45.35 0 1343190..1343522 - 110 148270482 - Tpet_1352 - anti-sigma-factor antagonist 1338 46.90 0 1343524..1345263 - 579 148270483 - Tpet_1353 - aspartyl-tRNA synthetase 1339 42.98 0 1345257..1345961 - 234 148270484 - Tpet_1354 - initiation factor 2B related 1340 45.77 0 1346161..1346916 + 251 148270485 - Tpet_1355 - hypothetical protein 1341 45.68 0 1346921..1348507 + 528 148270486 - Tpet_1356 - hypothetical protein 1342 42.91 0 1348504..1349286 + 260 148270487 - Tpet_1357 - dimethyladenosine transferase 1343 47.27 0 1349271..1349801 + 176 148270488 - Tpet_1358 - glycerol-3-phosphate responsive antiterminator 1344 44.44 0 1349758..1350153 - 131 148270489 - Tpet_1359 - CoA-binding domain-containing protein 1345 45.56 0 1350104..1350520 - 138 148270490 - Tpet_1360 - hypothetical protein 1346 50.50 +1 1350522..1351733 - 403 148270491 - Tpet_1361 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1347 48.68 0 1351730..1353169 - 479 148270492 - Tpet_1362 - FAD dependent oxidoreductase 1348 37.66 -2 1353248..1353802 - 184 148270493 - Tpet_1363 - glycerol-3-phosphate responsive antiterminator 1349 47.95 0 1353783..1355273 - 496 148270494 - Tpet_1364 - glycerol kinase 1350 48.09 0 1355357..1357057 - 566 148270495 - Tpet_1365 - methyl-accepting chemotaxis sensory transducer 1351 46.67 0 1357166..1357780 - 204 148270496 - Tpet_1366 - redox-sensing transcriptional repressor Rex 1352 46.80 0 1357773..1359710 - 645 148270497 - Tpet_1367 - hydrogenase large subunit 1353 49.34 +1 1359724..1361604 - 626 148270498 - Tpet_1368 - NADH dehydrogenase (quinone) 1354 47.94 0 1361597..1362082 - 161 148270499 - Tpet_1369 - NADH dehydrogenase (ubiquinone), 24 kDa subunit 1355 46.05 0 1362095..1363234 - 379 148270500 - Tpet_1370 - stage II sporulation E family protein 1356 44.89 0 1363221..1364786 - 521 148270501 - Tpet_1371 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1357 42.86 0 1364779..1364988 - 69 148270502 - Tpet_1372 - NADH:ubiquinone oxidoreductase 24 kD subunit-like protein 1358 49.87 +1 1365274..1366422 + 382 148270503 - Tpet_1373 - myo-inositol-1-phosphate synthase 1359 43.94 0 1366463..1367188 + 241 148270504 - Tpet_1374 - nucleotidyl transferase 1360 45.47 0 1367182..1367799 + 205 148270505 - Tpet_1375 - CDP-alcohol phosphatidyltransferase 1361 48.91 0 1367832..1368563 + 243 148270506 - Tpet_1376 - ABC transporter related 1362 48.95 0 1368560..1369513 + 317 148270507 - Tpet_1377 - SufBD protein 1363 47.60 0 1369670..1370440 + 256 148270508 - Tpet_1378 - inositol monophosphatase 1364 44.34 0 1370442..1371740 + 432 148270509 - Tpet_1379 - Beta-fructofuranosidase 1365 47.21 0 1372856..1373626 - 256 148270510 - Tpet_1380 - daunorubicin resistance ABC transporter, inner membrane subunit B 1366 46.95 0 1373631..1374614 - 327 148270511 - Tpet_1381 - daunorubicin resistance ABC transporter ATPase subunit 1367 47.46 0 1374887..1375813 - 308 148270512 - Tpet_1382 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1368 48.05 0 1375813..1376967 - 384 148270513 - Tpet_1383 - aminotransferase, class V 1369 41.22 -1 1377174..1377731 + 185 148270514 - Tpet_1384 - ribosome recycling factor 1370 44.16 0 1377728..1378429 + 233 148270515 - Tpet_1385 - undecaprenyl diphosphate synthase 1371 46.49 0 1378422..1379234 + 270 148270516 - Tpet_1386 - phosphatidate cytidylyltransferase 1372 48.69 0 1379231..1381822 + 863 148270517 - Tpet_1387 - alanyl-tRNA synthetase 1373 44.82 0 1381829..1382881 + 350 148270518 - Tpet_1388 - hypothetical protein 1374 47.65 0 1382837..1383709 - 290 148270519 - Tpet_1389 - Hsp33 protein 1375 46.79 0 1383706..1384374 - 222 148270520 - Tpet_1390 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1376 47.14 0 1384371..1384667 - 98 148270521 - Tpet_1391 - hypothetical protein 1377 48.40 0 1384674..1387049 - 791 148270522 - Tpet_1392 - ATPase 1378 45.65 0 1388449..1389195 - 248 148270523 - Tpet_1394 - methyltransferase type 11 1379 44.13 0 1389192..1389719 - 175 148270524 - Tpet_1395 - putative methyltransferase 1380 44.57 0 1389701..1390243 - 180 148270525 coaE Tpet_1396 - dephospho-CoA kinase 1381 45.45 0 1390237..1390467 - 76 148270526 - Tpet_1397 - hypothetical protein 1382 47.36 0 1390464..1391810 - 448 148270527 - Tpet_1398 - glucose-6-phosphate isomerase 1383 48.54 0 1391822..1392334 - 170 148270528 - Tpet_1399 - adenine phosphoribosyltransferase 1384 45.34 0 1392336..1393151 - 271 148270529 - Tpet_1400 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 1385 44.17 0 1393097..1393696 - 199 148270530 - Tpet_1401 - NUDIX hydrolase 1386 46.15 0 1393697..1394086 - 129 148270531 - Tpet_1402 - hypothetical protein 1387 44.84 0 1394103..1394771 - 222 148270532 - Tpet_1403 - hypothetical protein 1388 49.14 0 1394771..1396048 - 425 148270533 - Tpet_1404 - seryl-tRNA synthetase 1389 47.47 0 1396076..1396846 - 256 148270534 - Tpet_1405 - ornithine carbamoyltransferase 1390 47.53 0 1396843..1397631 - 262 148270535 - Tpet_1406 - binding-protein-dependent transport systems inner membrane component 1391 46.54 0 1397628..1398740 - 370 148270536 - Tpet_1407 - spermidine/putrescine ABC transporter ATPase subunit 1392 45.60 0 1398749..1399759 - 336 148270537 - Tpet_1408 - extracellular solute-binding protein 1393 46.04 0 1399926..1400531 - 201 148270538 - Tpet_1409 - phosphoglycerate mutase 1394 45.80 0 1400579..1401565 + 328 148270539 - Tpet_1410 - hypothetical protein 1395 46.52 0 1401543..1401959 - 138 148270540 - Tpet_1411 - NifU family SUF system FeS assembly protein 1396 47.67 0 1401956..1403197 - 413 148270541 - Tpet_1412 - SufS subfamily cysteine desulfurase 1397 46.70 0 1403175..1404281 - 368 148270542 - Tpet_1413 - FeS assembly protein SufD 1398 50.04 +1 1404292..1405686 - 464 148270543 - Tpet_1414 - FeS assembly protein SufB 1399 46.29 0 1405683..1406423 - 246 148270544 - Tpet_1415 - FeS assembly ATPase SufC 1400 44.00 0 1406685..1407059 + 124 148270545 - Tpet_1416 - hypothetical protein 1401 46.67 0 1407040..1407324 - 94 148270546 - Tpet_1417 - flagellar hook-basal body complex subunit FliE 1402 48.70 0 1407331..1407753 - 140 148270547 - Tpet_1418 - flagellar basal-body rod protein FlgC 1403 44.27 0 1407750..1408133 - 127 148270548 - Tpet_1419 - flagellar basal-body rod protein FlgB 1404 44.70 0 1408150..1409178 - 342 148270549 - Tpet_1420 - peptide chain release factor 1 1405 48.75 0 1409196..1410278 - 360 148270550 - Tpet_1421 - twitching motility protein 1406 47.39 0 1410283..1413042 - 919 148270551 - Tpet_1422 - isoleucyl-tRNA synthetase 1407 45.58 0 1413064..1413414 - 116 148270552 - Tpet_1423 - response regulator receiver protein 1408 42.67 -1 1413419..1415581 - 720 148270553 - Tpet_1424 - PAS/PAC sensor signal transduction histidine kinase 1409 42.63 -1 1415628..1416122 - 164 148270554 - Tpet_1425 - hypothetical protein 1410 49.33 +1 1416173..1417597 + 474 148270555 - Tpet_1426 - hypothetical protein 1411 45.11 0 1417647..1417994 + 115 148270556 - Tpet_1427 - positive regulator of sigma E, RseC/MucC 1412 46.44 0 1418006..1418356 + 116 148270557 - Tpet_1428 - DRTGG domain-containing protein 1413 45.55 0 1418353..1419318 + 321 148270558 - Tpet_1429 - putative anti-sigma regulatory factor, serine/threonine protein kinase 1414 50.32 +1 1419299..1419610 + 103 148270559 - Tpet_1430 - hypothetical protein 1415 46.92 0 1419607..1420305 + 232 148270560 - Tpet_1431 - phosphotransferase domain-containing protein 1416 46.88 0 1420299..1421708 + 469 148270561 - Tpet_1432 - glutamyl-tRNA synthetase 1417 46.38 0 1421711..1422484 + 257 148270562 - Tpet_1433 - alpha/beta hydrolase fold 1418 42.28 -1 1422486..1423502 + 338 148270563 - Tpet_1434 - hypothetical protein 1419 43.21 0 1423556..1424557 + 333 148270564 - Tpet_1435 - hypothetical protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0