version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1285 40.80 -1 1306940..1307140 + 66 148270430 - Tpet_1300 - ribosomal protein L29 1286 42.28 -1 1307145..1307468 + 107 148270431 rpsQ Tpet_1301 - 30S ribosomal protein S17 1287 44.99 0 1307465..1307833 + 122 148270432 - Tpet_1302 - ribosomal protein L14 1288 42.45 -1 1307846..1308163 + 105 148270433 rplX Tpet_1303 - 50S ribosomal protein L24 1289 43.99 0 1308150..1308731 + 193 148270434 rplE Tpet_1304 - 50S ribosomal protein L5 1290 51.61 +1 1308746..1308931 + 61 148270435 - Tpet_1305 - ribosomal protein S14 1291 43.46 0 1308947..1309351 + 134 148270436 - Tpet_1306 - ribosomal protein S8 1292 44.32 0 1309365..1309919 + 184 148270437 rplF Tpet_1307 - 50S ribosomal protein L6 1293 46.88 0 1309934..1310302 + 122 148270438 - Tpet_1308 - ribosomal protein L18 1294 45.07 0 1310317..1310853 + 178 148270439 - Tpet_1309 - ribosomal protein S5 1295 47.55 0 1310846..1311049 + 67 148270440 - Tpet_1310 - ribosomal protein L30 1296 46.62 0 1311046..1311489 + 147 148270441 - Tpet_1311 - ribosomal protein L15 1297 46.30 0 1311491..1312786 + 431 148270442 secY Tpet_1312 - preprotein translocase subunit SecY 1298 42.53 -1 1312783..1313445 + 220 148270443 - Tpet_1313 - nucleoside-triphosphate--adenylate kinase 1299 46.35 0 1313442..1314194 + 250 148270444 - Tpet_1314 - methionine aminopeptidase, type I 1300 43.11 0 1314196..1314420 + 74 148270445 - Tpet_1315 - translation initiation factor IF-1 1301 36.75 -2 1314438..1314554 + 38 148270446 rpmJ Tpet_1316 - 50S ribosomal protein L36 1302 44.97 0 1314570..1314947 + 125 148270447 rpsM Tpet_1317 - 30S ribosomal protein S13 1303 48.60 0 1314966..1315358 + 130 148270448 - Tpet_1318 - 30S ribosomal protein S11 1304 45.08 0 1315371..1316000 + 209 148270449 rpsD Tpet_1319 - 30S ribosomal protein S4 1305 43.22 0 1316006..1317016 + 336 148270450 - Tpet_1320 - DNA-directed RNA polymerase subunit alpha 1306 45.71 0 1317020..1317415 + 131 148270451 - Tpet_1321 - ribosomal protein L17 1307 44.31 0 1317470..1318753 + 427 148270452 rho Tpet_1322 - transcription termination factor Rho 1308 49.95 +1 1318770..1319714 + 314 148270453 - Tpet_1323 - ROK family protein 1309 45.44 0 1319719..1320585 + 288 148270454 - Tpet_1324 - degV family protein 1310 44.18 0 1320521..1321027 - 168 148270455 - Tpet_1325 - hypothetical protein 1311 42.66 -1 1321024..1322310 - 428 148270456 - Tpet_1326 - metal dependent phosphohydrolase 1312 43.03 0 1322584..1323171 - 195 148270457 - Tpet_1327 - small GTP-binding protein 1313 45.22 0 1323221..1323733 + 170 148270458 - Tpet_1328 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1314 46.08 0 1323745..1324599 + 284 148270459 - Tpet_1329 - indigoidine synthase A family protein 1315 48.15 0 1324657..1324791 + 44 148270460 rpmH Tpet_1330 - 50S ribosomal protein L34 1316 40.68 -1 1324788..1325141 + 117 148270461 - Tpet_1331 - ribonuclease P protein component 1317 45.12 0 1325138..1325383 + 81 148270462 - Tpet_1332 - hypothetical protein 1318 45.42 0 1325380..1326711 + 443 148270463 - Tpet_1333 - 60 kDa inner membrane insertion protein 1319 40.84 -1 1326723..1327388 + 221 148270464 - Tpet_1334 - single-stranded nucleic acid binding R3H domain-containing protein 1320 45.80 0 1327366..1327710 + 114 148270465 - Tpet_1335 - cupin 2 domain-containing protein 1321 46.98 0 1327839..1328153 + 104 148270466 - Tpet_1336 - ribosomal protein L21 1322 41.40 -1 1328150..1328434 + 94 148270467 - Tpet_1337 - hypothetical protein 1323 43.65 0 1328424..1328675 + 83 148270468 rpmA Tpet_1338 - 50S ribosomal protein L27 1324 46.38 0 1328665..1329231 + 188 148270469 - Tpet_1339 - membrane protein-like protein 1325 46.67 0 1329224..1329673 + 149 148270470 rplM Tpet_1340 - 50S ribosomal protein L13 1326 46.91 0 1329693..1330097 + 134 148270471 - Tpet_1341 - ribosomal protein S9 1327 43.11 0 1330548..1332245 + 565 148270472 - Tpet_1342 - DNA primase 1328 43.95 0 1332251..1333474 + 407 148270473 - Tpet_1343 - RpoD family RNA polymerase sigma factor 1329 44.30 0 1333490..1336171 - 893 148270474 - Tpet_1344 - transcription-repair coupling factor 1330 43.50 0 1336164..1336586 - 140 148270475 - Tpet_1345 - TPR repeat-containing protein 1331 42.39 -1 1336573..1338162 - 529 148270476 - Tpet_1346 - TPR repeat-containing protein 1332 48.05 0 1338167..1338757 - 196 148270477 - Tpet_1347 - hypothetical protein 1333 44.39 0 1338762..1340081 - 439 148270478 - Tpet_1348 - small GTP-binding protein 1334 43.57 0 1340084..1341715 - 543 148270479 - Tpet_1349 - RNA-binding S1 domain-containing protein 1335 45.05 0 1341702..1342529 - 275 148270480 - Tpet_1350 - hydroxymethylbutenyl pyrophosphate reductase 1336 48.72 0 1342526..1343188 - 220 148270481 - Tpet_1351 - cytidylate kinase 1337 45.35 0 1343190..1343522 - 110 148270482 - Tpet_1352 - anti-sigma-factor antagonist 1338 46.90 0 1343524..1345263 - 579 148270483 - Tpet_1353 - aspartyl-tRNA synthetase 1339 42.98 0 1345257..1345961 - 234 148270484 - Tpet_1354 - initiation factor 2B related 1340 45.77 0 1346161..1346916 + 251 148270485 - Tpet_1355 - hypothetical protein 1341 45.68 0 1346921..1348507 + 528 148270486 - Tpet_1356 - hypothetical protein 1342 42.91 0 1348504..1349286 + 260 148270487 - Tpet_1357 - dimethyladenosine transferase 1343 47.27 0 1349271..1349801 + 176 148270488 - Tpet_1358 - glycerol-3-phosphate responsive antiterminator 1344 44.44 0 1349758..1350153 - 131 148270489 - Tpet_1359 - CoA-binding domain-containing protein 1345 45.56 0 1350104..1350520 - 138 148270490 - Tpet_1360 - hypothetical protein 1346 50.50 +1 1350522..1351733 - 403 148270491 - Tpet_1361 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1347 48.68 0 1351730..1353169 - 479 148270492 - Tpet_1362 - FAD dependent oxidoreductase 1348 37.66 -2 1353248..1353802 - 184 148270493 - Tpet_1363 - glycerol-3-phosphate responsive antiterminator 1349 47.95 0 1353783..1355273 - 496 148270494 - Tpet_1364 - glycerol kinase 1350 48.09 0 1355357..1357057 - 566 148270495 - Tpet_1365 - methyl-accepting chemotaxis sensory transducer 1351 46.67 0 1357166..1357780 - 204 148270496 - Tpet_1366 - redox-sensing transcriptional repressor Rex 1352 46.80 0 1357773..1359710 - 645 148270497 - Tpet_1367 - hydrogenase large subunit 1353 49.34 +1 1359724..1361604 - 626 148270498 - Tpet_1368 - NADH dehydrogenase (quinone) 1354 47.94 0 1361597..1362082 - 161 148270499 - Tpet_1369 - NADH dehydrogenase (ubiquinone), 24 kDa subunit 1355 46.05 0 1362095..1363234 - 379 148270500 - Tpet_1370 - stage II sporulation E family protein 1356 44.89 0 1363221..1364786 - 521 148270501 - Tpet_1371 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1357 42.86 0 1364779..1364988 - 69 148270502 - Tpet_1372 - NADH:ubiquinone oxidoreductase 24 kD subunit-like protein 1358 49.87 +1 1365274..1366422 + 382 148270503 - Tpet_1373 - myo-inositol-1-phosphate synthase 1359 43.94 0 1366463..1367188 + 241 148270504 - Tpet_1374 - nucleotidyl transferase 1360 45.47 0 1367182..1367799 + 205 148270505 - Tpet_1375 - CDP-alcohol phosphatidyltransferase 1361 48.91 0 1367832..1368563 + 243 148270506 - Tpet_1376 - ABC transporter related 1362 48.95 0 1368560..1369513 + 317 148270507 - Tpet_1377 - SufBD protein 1363 47.60 0 1369670..1370440 + 256 148270508 - Tpet_1378 - inositol monophosphatase 1364 44.34 0 1370442..1371740 + 432 148270509 - Tpet_1379 - Beta-fructofuranosidase 1365 47.21 0 1372856..1373626 - 256 148270510 - Tpet_1380 - daunorubicin resistance ABC transporter, inner membrane subunit B 1366 46.95 0 1373631..1374614 - 327 148270511 - Tpet_1381 - daunorubicin resistance ABC transporter ATPase subunit 1367 47.46 0 1374887..1375813 - 308 148270512 - Tpet_1382 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 1368 48.05 0 1375813..1376967 - 384 148270513 - Tpet_1383 - aminotransferase, class V 1369 41.22 -1 1377174..1377731 + 185 148270514 - Tpet_1384 - ribosome recycling factor 1370 44.16 0 1377728..1378429 + 233 148270515 - Tpet_1385 - undecaprenyl diphosphate synthase 1371 46.49 0 1378422..1379234 + 270 148270516 - Tpet_1386 - phosphatidate cytidylyltransferase 1372 48.69 0 1379231..1381822 + 863 148270517 - Tpet_1387 - alanyl-tRNA synthetase 1373 44.82 0 1381829..1382881 + 350 148270518 - Tpet_1388 - hypothetical protein 1374 47.65 0 1382837..1383709 - 290 148270519 - Tpet_1389 - Hsp33 protein 1375 46.79 0 1383706..1384374 - 222 148270520 - Tpet_1390 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1376 47.14 0 1384371..1384667 - 98 148270521 - Tpet_1391 - hypothetical protein 1377 48.40 0 1384674..1387049 - 791 148270522 - Tpet_1392 - ATPase 1378 45.65 0 1388449..1389195 - 248 148270523 - Tpet_1394 - methyltransferase type 11 1379 44.13 0 1389192..1389719 - 175 148270524 - Tpet_1395 - putative methyltransferase 1380 44.57 0 1389701..1390243 - 180 148270525 coaE Tpet_1396 - dephospho-CoA kinase 1381 45.45 0 1390237..1390467 - 76 148270526 - Tpet_1397 - hypothetical protein 1382 47.36 0 1390464..1391810 - 448 148270527 - Tpet_1398 - glucose-6-phosphate isomerase 1383 48.54 0 1391822..1392334 - 170 148270528 - Tpet_1399 - adenine phosphoribosyltransferase 1384 45.34 0 1392336..1393151 - 271 148270529 - Tpet_1400 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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