version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1238 49.50 +1 1268736..1269731 + 331 148270383 flgI Tpet_1253 - flagellar basal body P-ring protein 1239 47.04 0 1269742..1270011 + 89 148270384 - Tpet_1254 - hypothetical protein 1240 46.68 0 1269999..1271324 - 441 148270385 - Tpet_1255 - radical SAM domain-containing protein 1241 49.91 +1 1271382..1271966 - 194 148270386 - Tpet_1256 - hypothetical protein 1242 43.26 0 1271979..1272875 - 298 148270387 - Tpet_1257 - polyprenyl synthetase 1243 45.03 0 1272844..1273185 - 113 148270388 - Tpet_1258 - hypothetical protein 1244 45.52 0 1273195..1273473 - 92 148270389 - Tpet_1259 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1245 46.17 0 1273480..1274796 - 438 148270390 - Tpet_1260 - FAD dependent oxidoreductase 1246 47.69 0 1274793..1275809 - 338 148270391 - Tpet_1261 - electron transfer flavoprotein, alpha subunit-like protein 1247 47.79 0 1275802..1276659 - 285 148270392 - Tpet_1262 - electron transfer flavoprotein, alpha/beta-subunit-like protein 1248 43.06 0 1276761..1277387 - 208 148270393 - Tpet_1263 - abortive infection protein 1249 45.52 0 1277387..1278256 - 289 148270394 - Tpet_1264 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1250 41.37 -1 1278284..1278706 + 140 148270395 - Tpet_1265 - BadM/Rrf2 family transcriptional regulator 1251 39.95 -1 1278668..1279105 - 145 148270396 - Tpet_1266 - rubrerythrin 1252 47.27 0 1279256..1280080 - 274 148270397 - Tpet_1267 - glycoside hydrolase family protein 1253 44.38 0 1280077..1281063 - 328 148270398 - Tpet_1268 - glycoside hydrolase family protein 1254 47.03 0 1282079..1283056 + 325 148270399 - Tpet_1269 - aspartate-semialdehyde dehydrogenase 1255 47.54 0 1283061..1283771 + 236 148270400 - Tpet_1270 - diaminopimelate epimerase 1256 50.51 +1 1283756..1284640 + 294 148270401 - Tpet_1271 - dihydrodipicolinate synthase 1257 50.23 +1 1284637..1285287 + 216 148270402 - Tpet_1272 - dihydrodipicolinate reductase 1258 47.58 0 1285289..1285990 + 233 148270403 - Tpet_1273 - tetrahydrodipicolinate succinyltransferase domain-containing protein 1259 50.25 +1 1286006..1287211 + 401 148270404 - Tpet_1274 - aspartate kinase 1260 49.53 +1 1287221..1288381 + 386 148270405 - Tpet_1275 - diaminopimelate decarboxylase 1261 47.11 0 1288382..1289455 + 357 148270406 - Tpet_1276 - amidohydrolase 1262 40.15 -1 1289470..1289880 + 136 148270407 - Tpet_1277 - ferric uptake regulator family protein 1263 43.24 0 1289856..1290269 + 137 148270408 - Tpet_1278 - hypothetical protein 1264 45.90 0 1290287..1291543 + 418 148270409 - Tpet_1279 - hypothetical protein 1265 47.92 0 1291513..1292808 - 431 148270410 - Tpet_1280 - sun protein 1266 47.76 0 1292805..1293497 - 230 148270411 - Tpet_1281 - peptidase, membrane zinc metallopeptidase, putative 1267 45.05 0 1293510..1294730 - 406 148270412 - Tpet_1282 - hypothetical protein 1268 41.94 -1 1294685..1295137 - 150 148270413 - Tpet_1283 - hypothetical protein 1269 45.55 0 1295118..1296443 - 441 148270414 - Tpet_1284 - metal dependent phosphohydrolase 1270 47.06 0 1296491..1297459 - 322 148270415 - Tpet_1285 - PhoH family protein 1271 41.19 -1 1297512..1297931 + 139 148270416 - Tpet_1286 - hypothetical protein 1272 48.18 0 1298053..1298436 + 127 148270417 rpsL Tpet_1287 - 30S ribosomal protein S12 1273 47.01 0 1298448..1298915 + 155 148270418 - Tpet_1288 - 30S ribosomal protein S7 1274 47.89 0 1298921..1301008 + 695 148270419 - Tpet_1289 - translation elongation factor G 1275 48.63 0 1301020..1302222 + 400 148270420 - Tpet_1290 - elongation factor Tu 1276 45.31 0 1302273..1302581 + 102 148270421 - Tpet_1291 - 30S ribosomal protein S10 1277 47.44 0 1302600..1303223 + 207 148270422 - Tpet_1292 - ribosomal protein L3 1278 46.47 0 1303244..1303951 + 235 148270423 rplD Tpet_1293 - 50S ribosomal protein L4 1279 42.90 0 1303923..1304225 + 100 148270424 - Tpet_1294 - ribosomal protein L25/L23 1280 50.06 +1 1304239..1305069 + 276 148270425 rplB Tpet_1295 - 50S ribosomal protein L2 1281 40.28 -1 1305083..1305370 + 95 148270426 - Tpet_1296 - ribosomal protein S19 1282 42.92 0 1305382..1305861 + 159 148270427 - Tpet_1297 - ribosomal protein L22 1283 46.19 0 1305871..1306500 + 209 148270428 - Tpet_1298 - ribosomal protein S3 1284 47.55 0 1306515..1306943 + 142 148270429 rplP Tpet_1299 - 50S ribosomal protein L16 1285 40.80 -1 1306940..1307140 + 66 148270430 - Tpet_1300 - ribosomal protein L29 1286 42.28 -1 1307145..1307468 + 107 148270431 rpsQ Tpet_1301 - 30S ribosomal protein S17 1287 44.99 0 1307465..1307833 + 122 148270432 - Tpet_1302 - ribosomal protein L14 1288 42.45 -1 1307846..1308163 + 105 148270433 rplX Tpet_1303 - 50S ribosomal protein L24 1289 43.99 0 1308150..1308731 + 193 148270434 rplE Tpet_1304 - 50S ribosomal protein L5 1290 51.61 +1 1308746..1308931 + 61 148270435 - Tpet_1305 - ribosomal protein S14 1291 43.46 0 1308947..1309351 + 134 148270436 - Tpet_1306 - ribosomal protein S8 1292 44.32 0 1309365..1309919 + 184 148270437 rplF Tpet_1307 - 50S ribosomal protein L6 1293 46.88 0 1309934..1310302 + 122 148270438 - Tpet_1308 - ribosomal protein L18 1294 45.07 0 1310317..1310853 + 178 148270439 - Tpet_1309 - ribosomal protein S5 1295 47.55 0 1310846..1311049 + 67 148270440 - Tpet_1310 - ribosomal protein L30 1296 46.62 0 1311046..1311489 + 147 148270441 - Tpet_1311 - ribosomal protein L15 1297 46.30 0 1311491..1312786 + 431 148270442 secY Tpet_1312 - preprotein translocase subunit SecY 1298 42.53 -1 1312783..1313445 + 220 148270443 - Tpet_1313 - nucleoside-triphosphate--adenylate kinase 1299 46.35 0 1313442..1314194 + 250 148270444 - Tpet_1314 - methionine aminopeptidase, type I 1300 43.11 0 1314196..1314420 + 74 148270445 - Tpet_1315 - translation initiation factor IF-1 1301 36.75 -2 1314438..1314554 + 38 148270446 rpmJ Tpet_1316 - 50S ribosomal protein L36 1302 44.97 0 1314570..1314947 + 125 148270447 rpsM Tpet_1317 - 30S ribosomal protein S13 1303 48.60 0 1314966..1315358 + 130 148270448 - Tpet_1318 - 30S ribosomal protein S11 1304 45.08 0 1315371..1316000 + 209 148270449 rpsD Tpet_1319 - 30S ribosomal protein S4 1305 43.22 0 1316006..1317016 + 336 148270450 - Tpet_1320 - DNA-directed RNA polymerase subunit alpha 1306 45.71 0 1317020..1317415 + 131 148270451 - Tpet_1321 - ribosomal protein L17 1307 44.31 0 1317470..1318753 + 427 148270452 rho Tpet_1322 - transcription termination factor Rho 1308 49.95 +1 1318770..1319714 + 314 148270453 - Tpet_1323 - ROK family protein 1309 45.44 0 1319719..1320585 + 288 148270454 - Tpet_1324 - degV family protein 1310 44.18 0 1320521..1321027 - 168 148270455 - Tpet_1325 - hypothetical protein 1311 42.66 -1 1321024..1322310 - 428 148270456 - Tpet_1326 - metal dependent phosphohydrolase 1312 43.03 0 1322584..1323171 - 195 148270457 - Tpet_1327 - small GTP-binding protein 1313 45.22 0 1323221..1323733 + 170 148270458 - Tpet_1328 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1314 46.08 0 1323745..1324599 + 284 148270459 - Tpet_1329 - indigoidine synthase A family protein 1315 48.15 0 1324657..1324791 + 44 148270460 rpmH Tpet_1330 - 50S ribosomal protein L34 1316 40.68 -1 1324788..1325141 + 117 148270461 - Tpet_1331 - ribonuclease P protein component 1317 45.12 0 1325138..1325383 + 81 148270462 - Tpet_1332 - hypothetical protein 1318 45.42 0 1325380..1326711 + 443 148270463 - Tpet_1333 - 60 kDa inner membrane insertion protein 1319 40.84 -1 1326723..1327388 + 221 148270464 - Tpet_1334 - single-stranded nucleic acid binding R3H domain-containing protein 1320 45.80 0 1327366..1327710 + 114 148270465 - Tpet_1335 - cupin 2 domain-containing protein 1321 46.98 0 1327839..1328153 + 104 148270466 - Tpet_1336 - ribosomal protein L21 1322 41.40 -1 1328150..1328434 + 94 148270467 - Tpet_1337 - hypothetical protein 1323 43.65 0 1328424..1328675 + 83 148270468 rpmA Tpet_1338 - 50S ribosomal protein L27 1324 46.38 0 1328665..1329231 + 188 148270469 - Tpet_1339 - membrane protein-like protein 1325 46.67 0 1329224..1329673 + 149 148270470 rplM Tpet_1340 - 50S ribosomal protein L13 1326 46.91 0 1329693..1330097 + 134 148270471 - Tpet_1341 - ribosomal protein S9 1327 43.11 0 1330548..1332245 + 565 148270472 - Tpet_1342 - DNA primase 1328 43.95 0 1332251..1333474 + 407 148270473 - Tpet_1343 - RpoD family RNA polymerase sigma factor 1329 44.30 0 1333490..1336171 - 893 148270474 - Tpet_1344 - transcription-repair coupling factor 1330 43.50 0 1336164..1336586 - 140 148270475 - Tpet_1345 - TPR repeat-containing protein 1331 42.39 -1 1336573..1338162 - 529 148270476 - Tpet_1346 - TPR repeat-containing protein 1332 48.05 0 1338167..1338757 - 196 148270477 - Tpet_1347 - hypothetical protein 1333 44.39 0 1338762..1340081 - 439 148270478 - Tpet_1348 - small GTP-binding protein 1334 43.57 0 1340084..1341715 - 543 148270479 - Tpet_1349 - RNA-binding S1 domain-containing protein 1335 45.05 0 1341702..1342529 - 275 148270480 - Tpet_1350 - hydroxymethylbutenyl pyrophosphate reductase 1336 48.72 0 1342526..1343188 - 220 148270481 - Tpet_1351 - cytidylate kinase 1337 45.35 0 1343190..1343522 - 110 148270482 - Tpet_1352 - anti-sigma-factor antagonist 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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