version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1184 45.30 0 1221171..1221947 + 258 148270329 - Tpet_1199 - diguanylate cyclase 1185 45.43 0 1221913..1222656 - 247 148270330 - Tpet_1200 - cobyrinic acid a,c-diamide synthase 1186 42.58 -1 1222667..1223023 - 118 148270331 rplT Tpet_1201 - 50S ribosomal protein L20 1187 40.91 -1 1223037..1223234 - 65 148270332 - Tpet_1202 - ribosomal protein L35 1188 42.38 -1 1223249..1223701 - 150 148270333 infC Tpet_1203 - translation initiation factor IF-3 1189 39.74 -1 1224551..1225096 - 181 148270334 - Tpet_1204 - diguanylate cyclase 1190 44.38 0 1225116..1225667 - 183 148270335 - Tpet_1205 - hypothetical protein 1191 44.93 0 1225694..1226314 + 206 148270336 - Tpet_1206 - hypothetical protein 1192 48.72 0 1226293..1227546 + 417 148270337 - Tpet_1207 - hydroxypyruvate reductase 1193 43.02 0 1227536..1228144 - 202 148270338 - Tpet_1208 - phosphoribosyltransferase 1194 46.17 0 1228138..1229220 - 360 148270339 - Tpet_1209 - hypothetical protein 1195 46.85 0 1229233..1229676 - 147 148270340 - Tpet_1210 - hypothetical protein 1196 44.24 0 1229687..1230832 - 381 148270341 - Tpet_1211 - type I phosphodiesterase/nucleotide pyrophosphatase 1197 44.12 0 1230951..1231886 + 311 148270342 - Tpet_1212 - Fis family transcriptional regulator 1198 45.74 0 1231878..1232981 - 367 148270343 prfB Tpet_1213 - peptide chain release factor 2 1199 46.02 0 1232987..1235602 - 871 148270344 secA Tpet_1214 - preprotein translocase subunit SecA 1200 43.85 0 1235604..1236830 - 408 148270345 - Tpet_1215 - hypothetical protein 1201 46.52 0 1236827..1237630 - 267 148270346 - Tpet_1216 - hemolysin A 1202 43.96 0 1237609..1238925 - 438 148270347 - Tpet_1217 - WD-40 repeat-containing protein 1203 48.24 0 1238922..1239659 - 245 148270348 - Tpet_1218 - tRNA pseudouridine synthase A 1204 45.70 0 1239729..1241540 + 603 148270349 - Tpet_1219 - Pyrrolo-quinoline quinone 1205 45.06 0 1241537..1242457 - 306 148270350 - Tpet_1220 - signal peptidase I 1206 46.26 0 1242457..1242804 - 115 148270351 rplS Tpet_1221 - 50S ribosomal protein L19 1207 45.94 0 1242807..1243385 - 192 148270352 - Tpet_1222 - hypothetical protein 1208 44.44 0 1243379..1244116 - 245 148270353 - Tpet_1223 - tRNA (guanine-N1)-methyltransferase 1209 43.69 0 1244116..1244646 - 176 148270354 - Tpet_1224 - 16S rRNA processing protein RimM 1210 44.30 0 1244651..1244878 - 75 148270355 - Tpet_1225 - RNA-binding protein 1211 47.22 0 1244875..1245162 - 95 148270356 - Tpet_1226 - ribosomal protein S16 1212 45.55 0 1245176..1246477 - 433 148270357 - Tpet_1227 - signal recognition particle protein 1213 46.15 0 1246629..1246901 - 90 148270358 - Tpet_1228 - acylphosphatase 1214 45.85 0 1246876..1247682 - 268 148270359 - Tpet_1229 - MscS mechanosensitive ion channel 1215 46.82 0 1247687..1248487 - 266 148270360 - Tpet_1230 - hypothetical protein 1216 48.20 0 1248484..1249593 - 369 148270361 - Tpet_1231 - queuine tRNA-ribosyltransferase 1217 48.44 0 1249578..1250186 - 202 148270362 - Tpet_1232 - formiminotransferase-cyclodeaminase 1218 47.66 0 1250176..1250922 - 248 148270363 - Tpet_1233 - deoxyribose-phosphate aldolase 1219 46.21 0 1250934..1251461 - 175 148270364 - Tpet_1234 - metal dependent phosphohydrolase 1220 48.58 0 1251479..1252147 - 222 148270365 - Tpet_1235 - DNA repair protein RadC 1221 46.83 0 1252074..1252688 - 204 148270366 - Tpet_1236 - maf protein 1222 45.79 0 1252612..1253157 - 181 148270367 - Tpet_1237 - heptaprenyl diphosphate synthase component I 1223 44.16 0 1253154..1253504 - 116 148270368 - Tpet_1238 - hypothetical protein 1224 47.24 0 1253510..1254559 - 349 148270369 - Tpet_1239 - ApbE family lipoprotein 1225 45.88 0 1254526..1255521 - 331 148270370 - Tpet_1240 - radical SAM domain-containing protein 1226 49.71 +1 1255534..1256058 - 174 148270371 - Tpet_1241 - AMMECR1 domain-containing protein 1227 44.89 0 1256135..1257025 + 296 148270372 - Tpet_1242 - hypothetical protein 1228 46.46 0 1256921..1257796 - 291 148270373 - Tpet_1243 - glycosyl transferase family protein 1229 46.70 0 1257777..1259594 - 605 148270374 - Tpet_1244 - polysaccharide biosynthesis protein CapD 1230 47.55 0 1259588..1260973 - 461 148270375 - Tpet_1245 - metal dependent phosphohydrolase 1231 44.53 0 1261079..1263946 + 955 148270376 - Tpet_1246 - single-stranded-DNA-specific exonuclease RecJ 1232 40.74 -1 1263943..1264563 + 206 148270377 - Tpet_1247 - Holliday junction resolvase YqgF 1233 48.47 0 1264695..1265705 + 336 148270378 - Tpet_1248 - cell shape determining protein MreB 1234 48.40 0 1265710..1266459 + 249 148270379 - Tpet_1249 - hypothetical protein 1235 50.89 +1 1266477..1267262 + 261 148270380 - Tpet_1250 - flagellar basal-body rod protein FlgG 1236 45.91 0 1267287..1268129 + 280 148270381 - Tpet_1251 - SAF domain-containing protein 1237 48.17 0 1268126..1268725 + 199 148270382 - Tpet_1252 - flagellar L-ring protein 1238 49.50 +1 1268736..1269731 + 331 148270383 flgI Tpet_1253 - flagellar basal body P-ring protein 1239 47.04 0 1269742..1270011 + 89 148270384 - Tpet_1254 - hypothetical protein 1240 46.68 0 1269999..1271324 - 441 148270385 - Tpet_1255 - radical SAM domain-containing protein 1241 49.91 +1 1271382..1271966 - 194 148270386 - Tpet_1256 - hypothetical protein 1242 43.26 0 1271979..1272875 - 298 148270387 - Tpet_1257 - polyprenyl synthetase 1243 45.03 0 1272844..1273185 - 113 148270388 - Tpet_1258 - hypothetical protein 1244 45.52 0 1273195..1273473 - 92 148270389 - Tpet_1259 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1245 46.17 0 1273480..1274796 - 438 148270390 - Tpet_1260 - FAD dependent oxidoreductase 1246 47.69 0 1274793..1275809 - 338 148270391 - Tpet_1261 - electron transfer flavoprotein, alpha subunit-like protein 1247 47.79 0 1275802..1276659 - 285 148270392 - Tpet_1262 - electron transfer flavoprotein, alpha/beta-subunit-like protein 1248 43.06 0 1276761..1277387 - 208 148270393 - Tpet_1263 - abortive infection protein 1249 45.52 0 1277387..1278256 - 289 148270394 - Tpet_1264 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1250 41.37 -1 1278284..1278706 + 140 148270395 - Tpet_1265 - BadM/Rrf2 family transcriptional regulator 1251 39.95 -1 1278668..1279105 - 145 148270396 - Tpet_1266 - rubrerythrin 1252 47.27 0 1279256..1280080 - 274 148270397 - Tpet_1267 - glycoside hydrolase family protein 1253 44.38 0 1280077..1281063 - 328 148270398 - Tpet_1268 - glycoside hydrolase family protein 1254 47.03 0 1282079..1283056 + 325 148270399 - Tpet_1269 - aspartate-semialdehyde dehydrogenase 1255 47.54 0 1283061..1283771 + 236 148270400 - Tpet_1270 - diaminopimelate epimerase 1256 50.51 +1 1283756..1284640 + 294 148270401 - Tpet_1271 - dihydrodipicolinate synthase 1257 50.23 +1 1284637..1285287 + 216 148270402 - Tpet_1272 - dihydrodipicolinate reductase 1258 47.58 0 1285289..1285990 + 233 148270403 - Tpet_1273 - tetrahydrodipicolinate succinyltransferase domain-containing protein 1259 50.25 +1 1286006..1287211 + 401 148270404 - Tpet_1274 - aspartate kinase 1260 49.53 +1 1287221..1288381 + 386 148270405 - Tpet_1275 - diaminopimelate decarboxylase 1261 47.11 0 1288382..1289455 + 357 148270406 - Tpet_1276 - amidohydrolase 1262 40.15 -1 1289470..1289880 + 136 148270407 - Tpet_1277 - ferric uptake regulator family protein 1263 43.24 0 1289856..1290269 + 137 148270408 - Tpet_1278 - hypothetical protein 1264 45.90 0 1290287..1291543 + 418 148270409 - Tpet_1279 - hypothetical protein 1265 47.92 0 1291513..1292808 - 431 148270410 - Tpet_1280 - sun protein 1266 47.76 0 1292805..1293497 - 230 148270411 - Tpet_1281 - peptidase, membrane zinc metallopeptidase, putative 1267 45.05 0 1293510..1294730 - 406 148270412 - Tpet_1282 - hypothetical protein 1268 41.94 -1 1294685..1295137 - 150 148270413 - Tpet_1283 - hypothetical protein 1269 45.55 0 1295118..1296443 - 441 148270414 - Tpet_1284 - metal dependent phosphohydrolase 1270 47.06 0 1296491..1297459 - 322 148270415 - Tpet_1285 - PhoH family protein 1271 41.19 -1 1297512..1297931 + 139 148270416 - Tpet_1286 - hypothetical protein 1272 48.18 0 1298053..1298436 + 127 148270417 rpsL Tpet_1287 - 30S ribosomal protein S12 1273 47.01 0 1298448..1298915 + 155 148270418 - Tpet_1288 - 30S ribosomal protein S7 1274 47.89 0 1298921..1301008 + 695 148270419 - Tpet_1289 - translation elongation factor G 1275 48.63 0 1301020..1302222 + 400 148270420 - Tpet_1290 - elongation factor Tu 1276 45.31 0 1302273..1302581 + 102 148270421 - Tpet_1291 - 30S ribosomal protein S10 1277 47.44 0 1302600..1303223 + 207 148270422 - Tpet_1292 - ribosomal protein L3 1278 46.47 0 1303244..1303951 + 235 148270423 rplD Tpet_1293 - 50S ribosomal protein L4 1279 42.90 0 1303923..1304225 + 100 148270424 - Tpet_1294 - ribosomal protein L25/L23 1280 50.06 +1 1304239..1305069 + 276 148270425 rplB Tpet_1295 - 50S ribosomal protein L2 1281 40.28 -1 1305083..1305370 + 95 148270426 - Tpet_1296 - ribosomal protein S19 1282 42.92 0 1305382..1305861 + 159 148270427 - Tpet_1297 - ribosomal protein L22 1283 46.19 0 1305871..1306500 + 209 148270428 - Tpet_1298 - ribosomal protein S3 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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