version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1149 45.74 0 1188687..1189331 + 214 148270294 - Tpet_1164 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1150 45.63 0 1189335..1189895 + 186 148270295 - Tpet_1165 - peptidyl-tRNA hydrolase 1151 38.06 -2 1189892..1190293 + 133 148270296 - Tpet_1166 - UvrB/UvrC protein 1152 46.21 0 1190313..1192673 - 786 148270297 - Tpet_1167 - glycoside hydrolase family protein 1153 46.31 0 1192771..1194588 + 605 148270298 - Tpet_1168 - GTP-binding protein LepA 1154 46.45 0 1194585..1195049 + 154 148270299 - Tpet_1169 - hypothetical protein 1155 43.65 0 1195046..1195714 + 222 148270300 - Tpet_1170 - glycerophosphoryl diester phosphodiesterase 1156 48.63 0 1195721..1196086 + 121 148270301 - Tpet_1171 - alkylhydroperoxidase 1157 46.61 0 1196064..1198745 + 893 148270302 - Tpet_1172 - DNA polymerase I 1158 46.37 0 1198759..1199226 + 155 148270303 - Tpet_1173 - CheC domain-containing protein 1159 43.59 0 1199449..1199799 + 116 148270304 - Tpet_1174 - hypothetical protein 1160 46.74 0 1199796..1200638 + 280 148270305 - Tpet_1175 - F0F1 ATP synthase subunit A 1161 51.94 +1 1200652..1200909 + 85 148270306 - Tpet_1176 - F0F1 ATP synthase subunit C 1162 45.05 0 1200923..1201417 + 164 148270307 - Tpet_1177 - ATP synthase F0, B subunit 1163 44.57 0 1201414..1201965 + 183 148270308 - Tpet_1178 - F0F1 ATP synthase subunit delta 1164 49.93 +1 1201962..1203473 + 503 148270309 - Tpet_1179 - F0F1 ATP synthase subunit alpha 1165 45.64 0 1203480..1204316 + 278 148270310 - Tpet_1180 - ATP synthase F1, gamma subunit 1166 50.04 +1 1204328..1205734 + 468 148270311 - Tpet_1181 - F0F1 ATP synthase subunit beta 1167 46.18 0 1205739..1206065 + 108 148270312 - Tpet_1182 - F0F1 ATP synthase subunit epsilon 1168 42.09 -1 1206242..1206595 + 117 148270313 - Tpet_1183 - DegV family protein 1169 42.90 0 1206577..1206879 + 100 148270314 - Tpet_1184 - hypothetical protein 1170 41.34 -1 1206893..1207429 + 178 148270315 - Tpet_1185 - sigma 54 modulation protein/ribosomal protein S30EA 1171 40.88 -1 1207499..1208863 + 454 148270316 - Tpet_1186 - ribonuclease 1172 43.33 0 1208865..1209464 + 199 148270317 tsf Tpet_1187 - elongation factor Ts 1173 46.98 0 1209526..1210221 + 231 148270318 - Tpet_1188 - uridylate kinase 1174 48.46 0 1210218..1211486 - 422 148270319 - Tpet_1189 - major facilitator transporter 1175 45.98 0 1211490..1212011 - 173 148270320 - Tpet_1190 - 3H domain-containing protein 1176 47.10 0 1212032..1213687 - 551 148270321 - Tpet_1191 - radical SAM domain-containing protein 1177 43.49 0 1213684..1214451 - 255 148270322 - Tpet_1192 - hypothetical protein 1178 42.37 -1 1214456..1214809 - 117 148270323 - Tpet_1193 - hypothetical protein 1179 43.51 0 1214799..1215368 - 189 148270324 - Tpet_1194 - ECF subfamily RNA polymerase sigma-24 factor 1180 45.86 0 1215401..1216462 - 353 148270325 - Tpet_1195 - alanine racemase domain-containing protein 1181 45.86 0 1216515..1217312 + 265 148270326 - Tpet_1196 - purine nucleoside phosphorylase 1182 45.91 0 1217313..1218314 + 333 148270327 - Tpet_1197 - phosphoesterase domain-containing protein 1183 40.95 -1 1218277..1221192 + 971 148270328 - Tpet_1198 - TPR repeat-containing protein 1184 45.30 0 1221171..1221947 + 258 148270329 - Tpet_1199 - diguanylate cyclase 1185 45.43 0 1221913..1222656 - 247 148270330 - Tpet_1200 - cobyrinic acid a,c-diamide synthase 1186 42.58 -1 1222667..1223023 - 118 148270331 rplT Tpet_1201 - 50S ribosomal protein L20 1187 40.91 -1 1223037..1223234 - 65 148270332 - Tpet_1202 - ribosomal protein L35 1188 42.38 -1 1223249..1223701 - 150 148270333 infC Tpet_1203 - translation initiation factor IF-3 1189 39.74 -1 1224551..1225096 - 181 148270334 - Tpet_1204 - diguanylate cyclase 1190 44.38 0 1225116..1225667 - 183 148270335 - Tpet_1205 - hypothetical protein 1191 44.93 0 1225694..1226314 + 206 148270336 - Tpet_1206 - hypothetical protein 1192 48.72 0 1226293..1227546 + 417 148270337 - Tpet_1207 - hydroxypyruvate reductase 1193 43.02 0 1227536..1228144 - 202 148270338 - Tpet_1208 - phosphoribosyltransferase 1194 46.17 0 1228138..1229220 - 360 148270339 - Tpet_1209 - hypothetical protein 1195 46.85 0 1229233..1229676 - 147 148270340 - Tpet_1210 - hypothetical protein 1196 44.24 0 1229687..1230832 - 381 148270341 - Tpet_1211 - type I phosphodiesterase/nucleotide pyrophosphatase 1197 44.12 0 1230951..1231886 + 311 148270342 - Tpet_1212 - Fis family transcriptional regulator 1198 45.74 0 1231878..1232981 - 367 148270343 prfB Tpet_1213 - peptide chain release factor 2 1199 46.02 0 1232987..1235602 - 871 148270344 secA Tpet_1214 - preprotein translocase subunit SecA 1200 43.85 0 1235604..1236830 - 408 148270345 - Tpet_1215 - hypothetical protein 1201 46.52 0 1236827..1237630 - 267 148270346 - Tpet_1216 - hemolysin A 1202 43.96 0 1237609..1238925 - 438 148270347 - Tpet_1217 - WD-40 repeat-containing protein 1203 48.24 0 1238922..1239659 - 245 148270348 - Tpet_1218 - tRNA pseudouridine synthase A 1204 45.70 0 1239729..1241540 + 603 148270349 - Tpet_1219 - Pyrrolo-quinoline quinone 1205 45.06 0 1241537..1242457 - 306 148270350 - Tpet_1220 - signal peptidase I 1206 46.26 0 1242457..1242804 - 115 148270351 rplS Tpet_1221 - 50S ribosomal protein L19 1207 45.94 0 1242807..1243385 - 192 148270352 - Tpet_1222 - hypothetical protein 1208 44.44 0 1243379..1244116 - 245 148270353 - Tpet_1223 - tRNA (guanine-N1)-methyltransferase 1209 43.69 0 1244116..1244646 - 176 148270354 - Tpet_1224 - 16S rRNA processing protein RimM 1210 44.30 0 1244651..1244878 - 75 148270355 - Tpet_1225 - RNA-binding protein 1211 47.22 0 1244875..1245162 - 95 148270356 - Tpet_1226 - ribosomal protein S16 1212 45.55 0 1245176..1246477 - 433 148270357 - Tpet_1227 - signal recognition particle protein 1213 46.15 0 1246629..1246901 - 90 148270358 - Tpet_1228 - acylphosphatase 1214 45.85 0 1246876..1247682 - 268 148270359 - Tpet_1229 - MscS mechanosensitive ion channel 1215 46.82 0 1247687..1248487 - 266 148270360 - Tpet_1230 - hypothetical protein 1216 48.20 0 1248484..1249593 - 369 148270361 - Tpet_1231 - queuine tRNA-ribosyltransferase 1217 48.44 0 1249578..1250186 - 202 148270362 - Tpet_1232 - formiminotransferase-cyclodeaminase 1218 47.66 0 1250176..1250922 - 248 148270363 - Tpet_1233 - deoxyribose-phosphate aldolase 1219 46.21 0 1250934..1251461 - 175 148270364 - Tpet_1234 - metal dependent phosphohydrolase 1220 48.58 0 1251479..1252147 - 222 148270365 - Tpet_1235 - DNA repair protein RadC 1221 46.83 0 1252074..1252688 - 204 148270366 - Tpet_1236 - maf protein 1222 45.79 0 1252612..1253157 - 181 148270367 - Tpet_1237 - heptaprenyl diphosphate synthase component I 1223 44.16 0 1253154..1253504 - 116 148270368 - Tpet_1238 - hypothetical protein 1224 47.24 0 1253510..1254559 - 349 148270369 - Tpet_1239 - ApbE family lipoprotein 1225 45.88 0 1254526..1255521 - 331 148270370 - Tpet_1240 - radical SAM domain-containing protein 1226 49.71 +1 1255534..1256058 - 174 148270371 - Tpet_1241 - AMMECR1 domain-containing protein 1227 44.89 0 1256135..1257025 + 296 148270372 - Tpet_1242 - hypothetical protein 1228 46.46 0 1256921..1257796 - 291 148270373 - Tpet_1243 - glycosyl transferase family protein 1229 46.70 0 1257777..1259594 - 605 148270374 - Tpet_1244 - polysaccharide biosynthesis protein CapD 1230 47.55 0 1259588..1260973 - 461 148270375 - Tpet_1245 - metal dependent phosphohydrolase 1231 44.53 0 1261079..1263946 + 955 148270376 - Tpet_1246 - single-stranded-DNA-specific exonuclease RecJ 1232 40.74 -1 1263943..1264563 + 206 148270377 - Tpet_1247 - Holliday junction resolvase YqgF 1233 48.47 0 1264695..1265705 + 336 148270378 - Tpet_1248 - cell shape determining protein MreB 1234 48.40 0 1265710..1266459 + 249 148270379 - Tpet_1249 - hypothetical protein 1235 50.89 +1 1266477..1267262 + 261 148270380 - Tpet_1250 - flagellar basal-body rod protein FlgG 1236 45.91 0 1267287..1268129 + 280 148270381 - Tpet_1251 - SAF domain-containing protein 1237 48.17 0 1268126..1268725 + 199 148270382 - Tpet_1252 - flagellar L-ring protein 1238 49.50 +1 1268736..1269731 + 331 148270383 flgI Tpet_1253 - flagellar basal body P-ring protein 1239 47.04 0 1269742..1270011 + 89 148270384 - Tpet_1254 - hypothetical protein 1240 46.68 0 1269999..1271324 - 441 148270385 - Tpet_1255 - radical SAM domain-containing protein 1241 49.91 +1 1271382..1271966 - 194 148270386 - Tpet_1256 - hypothetical protein 1242 43.26 0 1271979..1272875 - 298 148270387 - Tpet_1257 - polyprenyl synthetase 1243 45.03 0 1272844..1273185 - 113 148270388 - Tpet_1258 - hypothetical protein 1244 45.52 0 1273195..1273473 - 92 148270389 - Tpet_1259 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1245 46.17 0 1273480..1274796 - 438 148270390 - Tpet_1260 - FAD dependent oxidoreductase 1246 47.69 0 1274793..1275809 - 338 148270391 - Tpet_1261 - electron transfer flavoprotein, alpha subunit-like protein 1247 47.79 0 1275802..1276659 - 285 148270392 - Tpet_1262 - electron transfer flavoprotein, alpha/beta-subunit-like protein 1248 43.06 0 1276761..1277387 - 208 148270393 - Tpet_1263 - abortive infection protein 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0