version 1.0
Thermotoga petrophila RKU-1, complete genome - 1..1823511 1785 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 64 44.89 0 58313..58762 - 149 148269209 - Tpet_0064 - ribosomal protein L9 65 46.07 0 58845..59912 + 355 148269210 - Tpet_0065 - glucose-1-phosphate thymidyltransferase 66 47.05 0 59936..60817 - 293 148269211 - Tpet_0066 - protein-export membrane protein SecF 67 48.21 0 60814..62211 - 465 148269212 - Tpet_0067 - protein-export membrane protein SecD 68 45.87 0 62215..62565 - 116 148269213 - Tpet_0068 - preprotein translocase, YajC subunit 69 46.11 0 62558..63058 - 166 148269214 - Tpet_0069 - hypothetical protein 70 43.76 0 63066..63947 - 293 148269215 - Tpet_0070 - riboflavin biosynthesis protein RibF 71 46.02 0 63953..64882 - 309 148269216 - Tpet_0071 - tRNA pseudouridine synthase B 72 43.43 0 64879..65274 - 131 148269217 - Tpet_0072 - ribosome-binding factor A 73 46.27 0 65287..66144 - 285 148269218 - Tpet_0073 - metal dependent phosphohydrolase 74 41.57 -1 66113..67594 - 493 148269219 - Tpet_0074 - histidine kinase 75 46.83 0 67602..68609 - 335 148269220 - Tpet_0075 - Sua5/YciO/YrdC/YwlC family protein 76 42.48 -1 68880..69896 + 338 148269221 - Tpet_0076 - heat-inducible transcription repressor HrcA 77 42.58 -1 69902..70420 + 172 148269222 - Tpet_0077 - GrpE protein 78 47.39 0 70427..71536 + 369 148269223 - Tpet_0078 - chaperone protein DnaJ 79 44.23 0 71533..72624 - 363 148269224 - Tpet_0079 - GTP-binding protein, HSR1-related 80 45.51 0 72636..73538 - 300 148269225 - Tpet_0080 - GTP-binding protein Era 81 47.12 0 73528..73926 - 132 148269226 - Tpet_0081 - cytidine deaminase 82 44.15 0 73865..75232 - 455 148269227 - Tpet_0082 - hypothetical protein 83 42.32 -1 75249..75704 - 151 148269228 - Tpet_0083 - hypothetical protein 84 47.87 0 75701..76615 - 304 148269229 - Tpet_0084 - glutamate formiminotransferase 85 43.96 0 76612..77373 - 253 148269230 - Tpet_0085 - response regulator receiver protein 86 46.54 0 77412..78782 - 456 148269231 - Tpet_0086 - PEGA domain-containing protein 87 42.59 -1 78799..79446 - 215 148269232 - Tpet_0087 - hypothetical protein 88 45.30 0 79495..80505 - 336 148269233 - Tpet_0088 - cell cycle protein 89 40.46 -1 80572..81777 - 401 148269234 - Tpet_0089 - S-layer-like domain-containing protein 90 45.25 0 81774..83477 - 567 148269235 - Tpet_0090 - type II secretion system protein E 91 47.54 0 83477..84532 - 351 148269236 - Tpet_0091 - cell division protein FtsZ 92 43.49 0 84549..85799 - 416 148269237 - Tpet_0092 - cell division protein FtsA 93 36.94 -2 85801..86355 - 184 148269238 - Tpet_0093 - hypothetical protein 94 45.16 0 86358..88268 - 636 148269239 - Tpet_0094 - DNA gyrase, B subunit 95 40.20 -1 88249..88554 - 101 148269240 - Tpet_0095 - Zn-ribbon-containing protein 96 44.16 0 88551..89372 - 273 148269241 - Tpet_0096 - aminotransferase, class IV 97 43.98 0 89332..90636 - 434 148269242 - Tpet_0097 - MiaB-like tRNA modifying enzyme 98 43.71 0 90633..91085 - 150 148269243 - Tpet_0098 - CBS domain-containing protein 99 44.38 0 91086..92045 - 319 148269244 - Tpet_0099 - ribokinase-like domain-containing protein 100 39.43 -2 92075..92779 - 234 148269245 - Tpet_0100 - ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components-like protein 101 40.94 -1 92748..92918 - 56 148269246 - Tpet_0101 - hypothetical protein 102 45.16 0 93046..94017 + 323 148269247 - Tpet_0102 - radical SAM domain-containing protein 103 48.03 0 94100..95548 + 482 148269248 - Tpet_0103 - radical SAM domain-containing protein 104 42.41 -1 95564..96136 + 190 148269249 - Tpet_0104 - TetR family transcriptional regulator 105 47.36 0 96155..98521 - 788 148269250 - Tpet_0105 - phenylalanyl-tRNA synthetase, beta subunit 106 47.34 0 98537..99514 - 325 148269251 - Tpet_0106 - phenylalanyl-tRNA synthetase, alpha subunit 107 46.21 0 99663..100850 - 395 148269252 - Tpet_0107 - iron-containing alcohol dehydrogenase 108 52.42 +1 100889..102088 - 399 148269253 - Tpet_0108 - uracil-xanthine permease 109 45.90 0 102140..102871 - 243 148269254 - Tpet_0109 - WecB/TagA/CpsF family glycosyl transferase 110 46.02 0 103049..105073 - 674 148269255 - Tpet_0110 - RND efflux transporter 111 45.69 0 105075..105503 - 142 148269256 - Tpet_0111 - MarR family transcriptional regulator 112 44.26 0 105725..106429 + 234 148269257 - Tpet_0112 - hypothetical protein 113 49.32 +1 106638..108032 + 464 148269258 - Tpet_0113 - MATE efflux family protein 114 48.58 0 108038..109132 - 364 148269259 - Tpet_0114 - N-acetylglucosamine-6-phosphate deacetylase 115 46.12 0 109143..110135 - 330 148269260 - Tpet_0115 - glutamine--fructose-6-phosphate transaminase (isomerizing) 116 46.32 0 110149..110964 - 271 148269261 - Tpet_0116 - binding-protein-dependent transport systems inner membrane component 117 44.96 0 110957..111859 - 300 148269262 - Tpet_0117 - binding-protein-dependent transport systems inner membrane component 118 46.87 0 111909..113171 - 420 148269263 - Tpet_0118 - extracellular solute-binding protein 119 46.44 0 113168..114571 - 467 148269264 - Tpet_0119 - glycoside hydrolase family 3 protein 120 45.01 0 114579..115631 - 350 148269265 - Tpet_0120 - ROK family protein 121 46.91 0 115813..116460 - 215 148269266 - Tpet_0121 - peroxiredoxin 122 44.15 0 116621..119818 - 1065 148269267 - Tpet_0122 - O-antigen polymerase 123 47.19 0 119835..120758 - 307 148269268 - Tpet_0123 - glycosyl transferase family protein 124 47.86 0 120763..121464 - 233 148269269 - Tpet_0124 - HisJ family histidinol phosphate phosphatase 125 48.13 0 121461..123035 - 524 148269270 - Tpet_0125 - CTP synthetase 126 51.57 +1 123177..124415 + 412 148269271 - Tpet_0126 - Beta-ketoacyl synthase-like protein 127 49.03 0 124412..124825 + 137 148269272 - Tpet_0127 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 128 53.76 +2 124822..125766 + 314 148269273 - Tpet_0128 - 2-nitropropane dioxygenase, NPD 129 52.16 +1 125763..126272 + 169 148269274 - Tpet_0129 - BioY protein 130 47.73 0 126269..127150 + 293 148269275 - Tpet_0130 - malonyl CoA-acyl carrier protein transacylase 131 47.22 0 127128..127811 - 227 148269276 - Tpet_0131 - 2-phosphosulfolactate phosphatase 132 50.05 +1 127805..128821 - 338 148269277 - Tpet_0132 - hypothetical protein 133 47.48 0 128871..129683 + 270 148269278 - Tpet_0133 - ribokinase-like domain-containing protein 134 46.28 0 129600..131066 - 488 148269279 - Tpet_0134 - hypothetical protein 135 45.04 0 131121..132350 + 409 148269280 - Tpet_0135 - transposase, putative 136 49.40 +1 132391..133143 - 250 148269281 - Tpet_0136 - ABC transporter related 137 49.92 +1 133149..133787 - 212 148269282 - Tpet_0137 - hypothetical protein 138 46.86 0 133771..134184 - 137 148269283 - Tpet_0138 - 7-cyano-7-deazaguanine reductase 139 48.71 0 134189..135385 - 398 148269284 - Tpet_0139 - phosphomethylpyrimidine kinase type-1 140 44.98 0 135385..136131 - 248 148269285 - Tpet_0140 - xylose isomerase domain-containing protein 141 52.16 +1 136128..137402 - 424 148269286 - Tpet_0141 - thiamine biosynthesis protein ThiC 142 52.21 +1 137407..138153 - 248 148269287 - Tpet_0142 - ribulose-1,5-biphosphate synthetase 143 52.17 +1 138417..138761 + 114 148269288 - Tpet_0143 - hypothetical protein 144 49.37 +1 138776..139573 + 265 148269289 - Tpet_0144 - Linocin_M18 bacteriocin protein 145 47.09 0 139605..140120 - 171 148269290 - Tpet_0145 - hypothetical protein 146 46.27 0 140333..141337 - 334 148269291 - Tpet_0146 - glycosidase, PH1107-related 147 49.07 0 141378..141593 - 71 148269292 - Tpet_0147 - hypothetical protein 148 49.16 0 141636..142109 - 157 148269293 - Tpet_0148 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 149 44.49 0 142173..142916 + 247 148269294 - Tpet_0149 - hypothetical protein 150 47.64 0 142922..143515 + 197 148269295 - Tpet_0150 - hypothetical protein 151 44.10 0 143539..143928 + 129 148269296 - Tpet_0151 - transposase IS200-family protein 152 48.64 0 143913..145121 + 402 148269297 - Tpet_0152 - IS605 family transposase OrfB 153 48.51 0 145215..147296 - 693 148269298 infB Tpet_0153 - translation initiation factor IF-2 154 43.81 0 147307..147621 - 104 148269299 - Tpet_0154 - ribosomal protein L7Ae/L30e/S12e/Gadd45 155 44.14 0 147626..147847 - 73 148269300 - Tpet_0155 - hypothetical protein 156 47.67 0 147851..148666 - 271 148269301 - Tpet_0156 - PSP1 domain-containing protein 157 44.62 0 148657..149595 - 312 148269302 - Tpet_0157 - DNA polymerase III gamma/tau subunits-like protein 158 46.39 0 149656..151455 + 599 148269303 - Tpet_0158 - radical SAM domain-containing protein 159 48.66 0 151452..152867 + 471 148269304 - Tpet_0159 - phosphoglucomutase/phosphomannomutase alpha/beta/subunit 160 48.67 0 152864..153652 + 262 148269305 - Tpet_0160 - GTP-binding protein, HSR1-related 161 47.86 0 153615..155528 - 637 148269306 - Tpet_0161 - alpha amylase, catalytic region 162 44.26 0 155651..156016 + 121 148269307 - Tpet_0162 - regulatory protein GntR, HTH 163 46.29 0 156016..156810 + 264 148269308 - Tpet_0163 - ABC transporter related 46.02 MEAN 3.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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