version 1.0
Synechococcus sp. WH 7803, complete genome - 1..2366980 2533 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 494 58.29 0 500805..501998 - 397 148238830 - SynWH7803_0494 - bilin biosynthesis protein CpeY 495 50.52 -2 502092..502382 + 96 148238831 - SynWH7803_0495 - hypothetical protein 496 51.10 -1 502385..502975 + 196 148238832 - SynWH7803_0496 - hypothetical protein 497 47.57 -2 502980..503288 - 102 148238833 cpeR SynWH7803_0497 - C-phycoerythrin operon regulator 498 54.63 -1 503315..503929 - 204 148238834 cpeT SynWH7803_0498 - phycoerythrin linker gene region 499 52.89 -1 503944..504480 - 178 148238835 cpeS SynWH7803_0499 - phycoerythrin linker gene region 500 52.63 -1 504477..504647 - 56 148238836 - SynWH7803_0500 - hypothetical protein 501 59.21 0 504765..505502 - 245 148238837 cpeE SynWH7803_0501 - phycobilisome linker polypeptide, C-phycoerythrin class I-associated 502 59.84 0 505601..507241 - 546 148238838 mpeD SynWH7803_0502 - phycobilisome linker polypeptide, C-phycoerythrin-associated 503 59.89 0 507353..508237 - 294 148238839 cpeC SynWH7803_0503 - phycobilisome linker polypeptide, C-phycoerythrin class I-associated 504 58.81 0 508382..509056 - 224 148238840 - SynWH7803_0504 - hypothetical protein 505 53.28 -1 509082..509813 - 243 148238841 cpcG2 SynWH7803_0505 - phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5) 506 55.89 0 509860..510462 - 200 148238842 - SynWH7803_0506 - phycobilisome polypeptide 507 57.43 0 510459..510902 - 147 148238843 - SynWH7803_0507 - hypothetical protein 508 56.64 0 511066..511524 + 152 148238844 - SynWH7803_0508 - hypothetical protein 509 50.00 -2 511543..511782 - 79 148238845 - SynWH7803_0509 - hypothetical protein 510 62.44 0 511902..512564 - 220 148238846 - SynWH7803_0510 - amidophosphoribosyltransferase 511 63.19 0 512586..512873 - 95 148238847 - SynWH7803_0511 - hypothetical protein 512 63.04 0 513038..514306 - 422 148238848 - SynWH7803_0512 - sugar kinase 513 59.29 0 514324..515583 - 419 148238849 metK SynWH7803_0513 - S-adenosylmethionine synthetase 514 60.13 0 515630..516424 - 264 148238850 - SynWH7803_0514 - HAD superfamily phosphatase 515 58.24 0 516439..517542 - 367 148238851 rpsA SynWH7803_0515 - 30S ribosomal protein S1 516 55.56 0 517647..518087 - 146 148238852 - SynWH7803_0516 - transcriptional regulator 517 55.21 -1 518240..518335 - 31 148238853 psbT SynWH7803_0517 - photosystem II reaction center protein T 518 58.85 0 518357..519916 - 519 148238854 psbB SynWH7803_0518 - photosystem II P680 chlorophyll A apoprotein (CP-47 protein) 519 60.29 0 520178..520663 + 161 148238855 - SynWH7803_0519 - ferredoxin 520 49.52 -2 520722..520826 + 34 148238856 psbM SynWH7803_0520 - photosystem II reaction center M protein 521 60.31 0 520849..521697 - 282 148238857 uspA SynWH7803_0521 - universal stress protein 522 63.09 0 521750..522196 + 148 148238858 - SynWH7803_0522 - thioesterase 523 62.06 0 522208..523314 + 368 148238859 smf SynWH7803_0523 - Rossmann fold nucleotide-binding protein involved in DNA uptake 524 62.67 0 523324..524223 + 299 148238860 hemK SynWH7803_0524 - protoporphyrinogen oxidase 525 62.83 0 524244..524843 + 199 148238861 - SynWH7803_0525 - translation factor 526 60.00 0 524848..525012 + 54 148238862 - SynWH7803_0526 - hypothetical protein 527 54.88 -1 525093..525338 - 81 148238863 - SynWH7803_0527 - LuxR family transcriptional regulator 528 56.38 0 525374..525655 - 93 148238864 minE SynWH7803_0528 - cell division topological specificity factor 529 60.42 0 525661..526476 - 271 148238865 minD SynWH7803_0529 - septum site-determining protein MinD 530 61.54 0 526510..527211 - 233 148238866 minC SynWH7803_0530 - septum site-determining protein MinC 531 60.89 0 527221..528483 - 420 148238867 - SynWH7803_0531 - HD superfamily phosphohydrolase 532 61.52 0 528483..529745 - 420 148238868 ctp SynWH7803_0532 - carboxyl-terminal processing protease 533 54.49 -1 529846..530502 + 218 148238869 petB SynWH7803_0533 - cytochrome b6 534 54.95 -1 530616..531059 + 147 148238870 petD SynWH7803_0534 - cytochrome b6-f complex subunit IV 535 55.73 0 531241..532392 + 383 148238871 arsB SynWH7803_0535 - arsenical pump membrane protein 536 57.18 0 532371..533867 - 498 148238872 - SynWH7803_0536 - neutral invertase-like protein 537 48.70 -2 539990..540718 - 242 148238873 masA SynWH7803_0537 - putative enolase-phosphatase E-1 538 50.65 -1 540715..541332 - 205 148238874 - SynWH7803_0538 - sugar aldolase 539 58.45 0 541336..542187 - 283 148238875 mutM SynWH7803_0539 - formamidopyrimidine-DNA glycosylase 540 56.67 0 542193..542402 - 69 148238876 psaE SynWH7803_0540 - photosystem I reaction center subunit IV 541 60.81 0 542572..543579 + 335 148238877 - SynWH7803_0541 - hypothetical protein 542 61.49 0 543622..545109 + 495 148238878 recQ SynWH7803_0542 - ATP-dependent DNA helicase 543 60.70 0 545118..546173 - 351 148238879 - SynWH7803_0543 - LysM repeat-containing protein 544 61.19 0 546252..547676 - 474 148238880 - SynWH7803_0544 - aldehyde dehydrogenase 545 59.96 0 547764..549434 + 556 148238881 - SynWH7803_0545 - alpha-glucosidase 546 65.27 +1 549455..551029 - 524 148238882 - SynWH7803_0546 - glycerol-3-phosphate dehydrogenase 547 64.41 0 551022..552527 - 501 148238883 glpK SynWH7803_0547 - glycerol kinase 548 62.06 0 552580..554034 + 484 148238884 - SynWH7803_0548 - alpha-glucosidase 549 59.46 0 554257..554700 + 147 148238885 aroQ SynWH7803_0549 - 3-dehydroquinate dehydratase 550 58.06 0 554697..555347 + 216 148238886 miaE SynWH7803_0550 - tRNA-(MS[2]IO[6]A)-hydroxylase 551 61.18 0 555917..556153 + 78 148238887 - SynWH7803_0551 - hypothetical protein 552 43.20 -2 556259..556714 - 151 148238888 - SynWH7803_0552 - hypothetical protein 553 48.83 -2 556748..557089 - 113 148238889 - SynWH7803_0553 - hypothetical protein 554 45.69 -2 557139..557567 - 142 148238890 - SynWH7803_0554 - hypothetical protein 555 42.67 -2 557664..558980 - 438 148238891 - SynWH7803_0555 - multidrug resistance efflux pump 556 41.09 -2 558980..561247 - 755 148238892 - SynWH7803_0556 - ABC-type multidrug transport system, ATPase and permease components 557 40.85 -2 561244..563478 - 744 148238893 - SynWH7803_0557 - ABC-type multidrug transport system, ATPase and permease components 558 49.27 -2 563484..565202 - 572 148238894 - SynWH7803_0558 - hypothetical protein 559 48.16 -2 565384..566496 + 370 148238895 - SynWH7803_0559 - hypothetical protein 560 56.35 0 566523..567065 - 180 148238896 - SynWH7803_0560 - ARD/ARD' family protein (methionine salvage pathway) 561 61.71 0 567185..567910 + 241 148238897 cobI SynWH7803_0561 - precorrin-2 C20-methyltransferase 562 63.32 0 567937..568533 + 198 148238898 - SynWH7803_0562 - hypothetical protein 563 63.54 0 568543..570558 - 671 148238899 - SynWH7803_0563 - glycosyl transferase family protein 564 64.31 0 570555..571571 - 338 148238900 dus SynWH7803_0564 - tRNA-dihydrouridine synthase 565 64.09 0 571623..572204 - 193 148238901 - SynWH7803_0565 - hypothetical protein 566 65.81 +1 572284..572751 + 155 148238902 - SynWH7803_0566 - hypothetical protein 567 62.32 0 572755..573168 - 137 148238903 - SynWH7803_0567 - hypothetical protein 568 61.92 0 573290..574657 + 455 148238904 engA SynWH7803_0568 - GTP-binding protein EngA 569 61.76 0 574663..575580 + 305 148238905 cbiQ SynWH7803_0569 - cobalt ABC transporter permease 570 59.55 0 575598..575864 + 88 148238906 - SynWH7803_0570 - hypothetical protein 571 61.29 0 575887..576537 + 216 148238907 - SynWH7803_0571 - TIM-barrel fold family protein 572 61.43 0 576614..577186 + 190 148238908 - SynWH7803_0572 - hypothetical protein 573 62.52 0 577196..578014 + 272 148238909 proC SynWH7803_0573 - pyrroline-5-carboxylate reductase 574 63.17 0 578011..579183 - 390 148238910 - SynWH7803_0574 - glycosyl transferase family protein 575 63.41 0 579211..580593 - 460 148238911 - SynWH7803_0575 - major facilitator superfamily permease 576 69.86 +1 580603..581415 - 270 148238912 recO SynWH7803_0576 - DNA repair protein RecO 577 63.29 0 581412..582092 - 226 148238913 deoC SynWH7803_0577 - deoxyribose-phosphate aldolase 578 61.39 0 582127..582714 - 195 148238914 lrtA SynWH7803_0578 - light repressed protein A-like protein 579 63.43 0 582727..583467 + 246 148238915 lipB SynWH7803_0579 - lipoyltransferase 580 64.56 0 583496..585439 + 647 148238916 fadD SynWH7803_0580 - long-chain acyl-CoA synthetase 581 62.39 0 585511..585954 + 147 148238917 - SynWH7803_0581 - hypothetical protein 582 65.33 +1 586023..587372 + 449 148238918 pdhC SynWH7803_0582 - branched-chain alpha-keto acid dehydrogenase subunit E2 583 61.90 0 587443..589329 + 628 148238919 - SynWH7803_0583 - amino acid permease 584 63.25 0 589366..590478 + 370 148238920 queA SynWH7803_0584 - S-adenosylmethionine:tRNA-ribosyltransferase-isom erase 585 62.01 0 590488..591474 - 328 148238921 cysK SynWH7803_0585 - cysteine synthase 586 63.84 0 591554..593038 - 494 148238922 metB SynWH7803_0586 - hypothetical protein 587 62.44 0 593035..594216 - 393 148238923 - SynWH7803_0587 - metC/metB cystathionine beta-lyase/cystathioninegamma-synthase 588 49.43 -2 594269..594529 + 86 148238924 - SynWH7803_0588 - hypothetical protein 589 46.10 -2 594539..595603 - 354 148238925 - SynWH7803_0589 - Fatty acid desaturase 590 61.46 0 595839..596030 + 63 148238926 - SynWH7803_0590 - hypothetical protein 591 62.40 0 596133..596741 - 202 148238927 rpsD SynWH7803_0591 - 30S ribosomal protein S4 592 60.75 0 596772..597092 + 106 148238928 - SynWH7803_0592 - hypothetical protein 593 61.51 0 597114..597404 + 96 148238929 - SynWH7803_0593 - thioredoxin family protein 60.32 MEAN 4.87 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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