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Synechococcus sp. WH 7803, complete genome - 1..2366980 2533 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1761 65.05 0 1614274..1615572 - 432 148240097 hemN SynWH7803_1761 - oxygen independent coproporphyrinogen III oxidase 1762 62.68 0 1615596..1616798 + 400 148240098 - SynWH7803_1762 - integral membrane protein 1763 59.38 0 1616829..1617500 + 223 148240099 clpP SynWH7803_1763 - ATP-dependent Clp protease-like protein 1764 59.54 0 1617546..1618148 + 200 148240100 clpP SynWH7803_1764 - ATP-dependent Clp protease proteolytic subunit 1765 60.84 0 1618205..1619200 + 331 148240101 ilvC SynWH7803_1765 - ketol-acid reductoisomerase 1766 65.76 +1 1619229..1620224 + 331 148240102 cobD/cbiB SynWH7803_1766 - cobalamin biosynthesis protein CobD/CbiB 1767 60.68 0 1620240..1620974 - 244 148240103 - SynWH7803_1767 - sugar transferase 1768 55.81 0 1621195..1621452 + 85 148240104 - SynWH7803_1768 - hypothetical protein 1769 67.18 +1 1621592..1623547 - 651 148240105 - SynWH7803_1769 - membrane metal-binding protein 1770 61.73 0 1623601..1624491 - 296 148240106 glyQ SynWH7803_1770 - glycyl-tRNA synthetase subunit alpha 1771 61.21 0 1624541..1624888 - 115 148240107 - SynWH7803_1771 - hypothetical protein 1772 64.10 0 1624975..1625676 - 233 148240108 ubiE SynWH7803_1772 - menaquinone biosynthesis methyltransferase ubiE 1773 55.56 0 1625673..1625906 - 77 148240109 - SynWH7803_1773 - hypothetical protein 1774 62.75 0 1625964..1626755 - 263 148240110 hisF SynWH7803_1774 - imidazole glycerol phosphate synthase subunit HisF 1775 56.62 0 1626810..1627028 + 72 148240111 - SynWH7803_1775 - hypothetical protein 1776 60.27 0 1627040..1627993 + 317 148240112 chlG SynWH7803_1776 - bacteriochlorophyll/chlorophyll a synthase 1777 63.04 0 1627990..1630029 + 679 148240113 - SynWH7803_1777 - glycosyltransferase 1778 66.74 +1 1630007..1631350 - 447 148240114 rsmB SynWH7803_1778 - ribosomal RNA small subunit methyltransferase B 1779 56.93 0 1631487..1633109 + 540 148240115 - SynWH7803_1779 - porin-like protein 1780 62.81 0 1633038..1633478 - 146 148240116 - SynWH7803_1780 - methylated DNA-protein cysteine methyltransferase 1781 67.87 +1 1633478..1633810 - 110 148240117 - SynWH7803_1781 - hypothetical protein 1782 64.35 0 1633953..1634642 + 229 148240118 spoU SynWH7803_1782 - tRNA (guanosine-2'-O-)-methyltransferase 1783 61.67 0 1634693..1635412 + 239 148240119 - SynWH7803_1783 - glutaredoxine domain-containing protein 1784 62.45 0 1635447..1635707 - 86 148240120 - SynWH7803_1784 - hypothetical protein 1785 65.86 +1 1635728..1636600 - 290 148240121 dppC SynWH7803_1785 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component 1786 64.47 0 1636666..1638075 + 469 148240122 - SynWH7803_1786 - two-component system sensor histidine kinase 1787 61.29 0 1638075..1638446 + 123 148240123 - SynWH7803_1787 - hypothetical protein 1788 63.87 0 1638394..1639857 - 487 148240124 - SynWH7803_1788 - two-component system sensor histidine kinase 1789 63.95 0 1639951..1640538 - 195 148240125 - SynWH7803_1789 - hypothetical protein 1790 67.80 +1 1640546..1641073 - 175 148240126 - SynWH7803_1790 - pili subunit superfamily protein 1791 66.67 +1 1641070..1641474 - 134 148240127 - SynWH7803_1791 - hypothetical protein 1792 70.08 +2 1641474..1641971 - 165 148240128 - SynWH7803_1792 - hypothetical protein 1793 63.84 0 1642048..1642755 + 235 148240129 - SynWH7803_1793 - two-component system response regulator 1794 64.80 0 1642730..1644016 - 428 148240130 - SynWH7803_1794 - two-component system sensor histidine kinase 1795 49.68 -2 1644150..1644614 + 154 148240131 - SynWH7803_1795 - pili subunit superfamily protein 1796 47.42 -2 1644983..1645486 + 167 148240132 - SynWH7803_1796 - pili subunit superfamily protein 1797 47.24 -2 1645501..1647477 + 658 148240133 - SynWH7803_1797 - hypothetical protein 1798 48.64 -2 1647606..1648121 + 171 148240134 - SynWH7803_1798 - pili subunit superfamily protein 1799 47.04 -2 1648118..1648810 + 230 148240135 - SynWH7803_1799 - pili subunit superfamily protein 1800 47.99 -2 1648950..1650587 + 545 148240136 - SynWH7803_1800 - hypothetical protein 1801 58.79 0 1650607..1652421 - 604 148240137 lepA SynWH7803_1801 - GTP-binding protein LepA 1802 57.01 0 1652603..1654600 + 665 148240138 phoD SynWH7803_1802 - putative phosphodiesterase/alkaline phosphatase D 1803 64.84 0 1654614..1656146 - 510 148240139 - SynWH7803_1803 - Zn-dependent carboxypeptidase 1804 62.96 0 1656154..1656396 - 80 148240140 - SynWH7803_1804 - hypothetical protein 1805 62.06 0 1656469..1656750 + 93 148240141 - SynWH7803_1805 - putative pterin-4-alpha-carbinolamine dehydratase 1806 58.61 0 1656788..1657879 + 363 148240142 - SynWH7803_1806 - G3E family GTPase 1807 63.27 0 1657932..1658078 + 48 148240143 - SynWH7803_1807 - hypothetical protein 1808 63.22 0 1658213..1659256 + 347 148240144 futA SynWH7803_1808 - ABC-type Fe3+ transport system, periplasmic component 1809 67.23 +1 1659264..1660856 + 530 148240145 futB SynWH7803_1809 - ABC-type Fe3+ transport system permease component 1810 67.77 +1 1660835..1663015 - 726 148240146 - SynWH7803_1810 - phosphatase 1811 69.03 +1 1663018..1664031 - 337 148240147 - SynWH7803_1811 - hypothetical protein 1812 61.07 0 1664033..1665373 - 446 148240148 - SynWH7803_1812 - MFS family sugar transporter 1813 65.63 +1 1665520..1666485 - 321 148240149 - SynWH7803_1813 - hypothetical protein 1814 65.60 +1 1666479..1667699 - 406 148240150 - SynWH7803_1814 - hypothetical protein 1815 67.29 +1 1667696..1668334 - 212 148240151 - SynWH7803_1815 - hypothetical protein 1816 62.35 0 1668334..1668981 - 215 148240152 - SynWH7803_1816 - hypothetical protein 1817 62.70 0 1669068..1669799 + 243 148240153 - SynWH7803_1817 - TPR repeat-containing protein 1818 62.67 0 1669771..1670070 - 99 148240154 - SynWH7803_1818 - hypothetical protein 1819 61.13 0 1670131..1670961 + 276 148240155 xthA SynWH7803_1819 - exodeoxyribonuclease III 1820 62.82 0 1670958..1672466 - 502 148240156 glcD SynWH7803_1820 - glycolate oxidase subunit GlcD 1821 62.67 0 1672566..1673867 + 433 148240157 - SynWH7803_1821 - glutamate-1-semialdehyde aminotransferase 1822 57.84 0 1673909..1675120 + 403 148240158 oprB SynWH7803_1822 - carbohydrate-selective porin OprB related protein 1823 50.10 -2 1675122..1675616 - 164 148240159 - SynWH7803_1823 - nucleotide-binding protein 1824 56.26 0 1675642..1676208 - 188 148240160 - SynWH7803_1824 - hypothetical protein 1825 64.88 0 1676264..1676710 + 148 148240161 - SynWH7803_1825 - hypothetical protein 1826 58.47 0 1676707..1677621 - 304 148240162 - SynWH7803_1826 - prohibitin family protein 1827 63.06 0 1677680..1678123 + 147 148240163 - SynWH7803_1827 - putative membrane protein implicated in regulation of membrane protease activity 1828 56.92 0 1678127..1678639 - 170 148240164 - SynWH7803_1828 - Rossmann fold nucleotide-binding protein involved in DNA uptake 1829 59.41 0 1678676..1679764 - 362 148240165 - SynWH7803_1829 - phosphotransacetylase domain-containing protein 1830 63.25 0 1679791..1680171 - 126 148240166 - SynWH7803_1830 - hypothetical protein 1831 59.26 0 1680192..1680974 + 260 148240167 - SynWH7803_1831 - short chain dehydrogenase 1832 59.05 0 1680955..1681794 - 279 148240168 map SynWH7803_1832 - methionine aminopeptidase 1833 58.73 0 1681865..1682179 + 104 148240169 - SynWH7803_1833 - hypothetical protein 1834 58.38 0 1682212..1682706 + 164 148240170 rplS SynWH7803_1834 - 50S ribosomal protein L19 1835 55.03 -1 1682879..1683067 + 62 148240171 - SynWH7803_1835 - hypothetical protein 1836 59.61 0 1683353..1684783 + 476 148240172 gltX SynWH7803_1836 - glutamyl-tRNA synthetase 1837 64.43 0 1684766..1686016 - 416 148240173 - SynWH7803_1837 - putative Na+/H+ antiporter 1838 58.54 0 1686006..1686251 - 81 148240174 - SynWH7803_1838 - hypothetical protein 1839 63.92 0 1686251..1686832 - 193 148240175 - SynWH7803_1839 - hypothetical protein 1840 64.24 0 1686777..1687889 - 370 148240176 nfrC SynWH7803_1840 - UDP-N-acetylglucosamine 2-epimerase 1841 59.86 0 1687892..1689184 + 430 148240177 pilT SynWH7803_1841 - twitching motility protein 1842 58.08 0 1689205..1689402 - 65 148240178 hli SynWH7803_1842 - high light inducible protein 1843 63.21 0 1689439..1690509 - 356 148240179 gcp SynWH7803_1843 - o-sialoglycoprotein endopeptidase 1844 59.38 0 1690586..1691065 + 159 148240180 psaF SynWH7803_1844 - photosystem I reaction centre PsaF protein 1845 49.12 -2 1691104..1691217 + 37 148240181 psaJ SynWH7803_1845 - photosystem I reaction center subunit IX 1846 59.55 0 1691279..1691854 - 191 148240182 gmk SynWH7803_1846 - guanylate kinase 1847 61.54 0 1691918..1693633 + 571 148240183 - SynWH7803_1847 - RNA-binding protein 1848 62.52 0 1693711..1694481 + 256 148240184 tatC SynWH7803_1848 - Sec-independent protein secretion pathway component TatC 1849 60.29 0 1694432..1694776 - 114 148240185 - SynWH7803_1849 - hypothetical protein 1850 62.01 0 1694883..1695419 + 178 148240186 petC SynWH7803_1850 - cytochrome b6-f complex iron-sulfur subunit 1851 58.52 0 1695461..1696393 + 310 148240187 petA SynWH7803_1851 - apocytochrome f 1852 57.42 0 1696390..1697265 + 291 148240188 lgt SynWH7803_1852 - prolipoprotein diacylglyceryl transferase 1853 59.77 0 1697262..1698029 + 255 148240189 cobM SynWH7803_1853 - precorrin-4 methylase 1854 60.55 0 1698298..1699065 + 255 148240190 - SynWH7803_1854 - hypothetical protein 1855 59.63 0 1699049..1700710 - 553 148240191 ppX SynWH7803_1855 - exopolyphosphatase 1856 62.21 0 1700808..1701704 + 298 148240192 ubiA SynWH7803_1856 - prenyltransferase 1857 65.14 0 1701704..1702621 + 305 148240193 - SynWH7803_1857 - hypothetical protein 1858 63.84 0 1702612..1703283 - 223 148240194 ispD SynWH7803_1858 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1859 65.34 +1 1703356..1704183 + 275 148240195 - SynWH7803_1859 - glycosyltransferase family protein 1860 62.75 0 1704183..1705304 + 373 148240196 - SynWH7803_1860 - putative potassium channel 60.32 MEAN 4.87 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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