version 1.0
Synechococcus sp. WH 7803, complete genome - 1..2366980 2533 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1700 63.66 0 1554607..1554939 - 110 148240036 - SynWH7803_1700 - hypothetical protein 1701 59.00 0 1554899..1555576 - 225 148240037 - SynWH7803_1701 - hypothetical protein 1702 42.64 -2 1556247..1556783 + 178 148240038 - SynWH7803_1702 - putative transcriptional regulator 1703 51.44 -1 1556784..1557827 - 347 148240039 - SynWH7803_1703 - hypothetical protein 1704 57.35 0 1558054..1558998 + 314 148240040 - SynWH7803_1704 - hypothetical protein 1705 52.88 -1 1559023..1560030 - 335 148240041 - SynWH7803_1705 - hypothetical protein 1706 52.82 -1 1560222..1561340 - 372 148240042 - SynWH7803_1706 - hypothetical protein 1707 67.15 +1 1561471..1562724 + 417 148240043 cobL SynWH7803_1707 - precorrin-6Y methylase 1708 64.24 0 1562937..1563389 - 150 148240044 - SynWH7803_1708 - hypothetical protein 1709 64.08 0 1563389..1564084 - 231 148240045 - SynWH7803_1709 - two-component sytem response regulator 1710 64.05 0 1564081..1564998 - 305 148240046 ppnK SynWH7803_1710 - inorganic polyphosphate/ATP-NAD kinase 1711 63.38 0 1565077..1566720 - 547 148240047 - SynWH7803_1711 - protein kinase 1712 63.49 0 1566819..1567826 - 335 148240048 pheS SynWH7803_1712 - phenylalanyl-tRNA synthetase alpha subunit 1713 65.06 0 1567898..1568707 + 269 148240049 surE SynWH7803_1713 - 5'-nucleotidase SurE 1714 63.99 0 1568692..1569252 - 186 148240050 - SynWH7803_1714 - hypothetical protein 1715 66.77 +1 1569312..1570238 + 308 148240051 ribF SynWH7803_1715 - riboflavin biosynthesis protein ribF (riboflavin kinase / FMN adenylyltransferase) 1716 66.29 +1 1570375..1571436 + 353 148240052 thiE SynWH7803_1716 - thiamine-phosphate pyrophosphorylase 1717 58.94 0 1571451..1571657 + 68 148240053 thiS SynWH7803_1717 - sulfur transfer protein involved in thiamine biosynthesis 1718 64.92 0 1571683..1572657 + 324 148240054 - SynWH7803_1718 - hypothetical protein 1719 61.31 0 1572754..1572921 + 55 148240055 - SynWH7803_1719 - hypothetical protein 1720 59.65 0 1572999..1573169 + 56 148240056 - SynWH7803_1720 - hypothetical protein 1721 65.47 +1 1573166..1573831 - 221 148240057 cpmA SynWH7803_1721 - circadian phase modifier CpmA-like protein 1722 63.60 0 1573828..1574283 - 151 148240058 - SynWH7803_1722 - hypothetical protein 1723 60.87 0 1574280..1574762 - 160 148240059 ispF SynWH7803_1723 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1724 64.47 0 1574763..1575491 - 242 148240060 trmD SynWH7803_1724 - tRNA-(guanine-N1)-methyltransferase 1725 65.15 0 1575498..1575959 - 153 148240061 - SynWH7803_1725 - hypothetical protein 1726 63.58 0 1575984..1576922 - 312 148240062 era SynWH7803_1726 - GTP-binding protein Era 1727 64.18 0 1576995..1577516 + 173 148240063 - SynWH7803_1727 - hypothetical protein 1728 61.22 0 1577902..1578636 - 244 148240064 - SynWH7803_1728 - integral membrane protein 1729 62.11 0 1578689..1579720 - 343 148240065 - SynWH7803_1729 - PhoH-like hosphate starvation-inducible protein 1730 64.03 0 1579729..1580145 - 138 148240066 rpsP SynWH7803_1730 - 30S ribosomal protein S16 1731 64.06 0 1580221..1581792 - 523 148240067 ffh SynWH7803_1731 - Signal recognition particle protein 1732 63.36 0 1581791..1583482 + 563 148240068 - SynWH7803_1732 - MFS superfamily sulfate permease 1733 64.70 0 1583467..1585602 - 711 148240069 - SynWH7803_1733 - DnaJ domain-containing protein 1734 62.74 0 1585649..1586743 + 364 148240070 pdhA SynWH7803_1734 - pyruvate dehydrogenase E1 component alpha subunit 1735 64.04 0 1586745..1587659 - 304 148240071 - SynWH7803_1735 - histone deacetylase family protein 1736 57.86 0 1587697..1588638 - 313 148240072 rpoD SynWH7803_1736 - RNA polymerase sigma factor, sigma-70 family 1737 66.28 +1 1588796..1590346 - 516 148240073 - SynWH7803_1737 - fused sugar kinase/uncharacterized domain-containing protein 1738 64.36 0 1590406..1591575 + 389 148240074 trmU SynWH7803_1738 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1739 65.41 +1 1591499..1593010 - 503 148240075 lnt SynWH7803_1739 - apolipoprotein N-acyltransferase 1740 64.24 0 1593064..1593393 + 109 148240076 - SynWH7803_1740 - hypothetical protein 1741 64.19 0 1593429..1594034 + 201 148240077 fkpA SynWH7803_1741 - FKBP-type peptidyl-prolyl cis-trans isomerase 1742 61.00 0 1594105..1594704 + 199 148240078 sodB SynWH7803_1742 - superoxide dismutase 1743 60.23 0 1594750..1595634 - 294 148240079 trpC SynWH7803_1743 - indole-3-glycerol-phosphate synthase 1744 62.04 0 1595657..1597105 - 482 148240080 lpdA SynWH7803_1744 - dihydrolipoamide dehydrogenase 1745 63.24 0 1597102..1597977 - 291 148240081 spoU SynWH7803_1745 - rRNA methylase 1746 62.05 0 1598495..1599793 + 432 148240082 murA SynWH7803_1746 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1747 62.57 0 1599995..1601215 + 406 148240083 argD SynWH7803_1747 - acetylornithine aminotransferase 1748 66.10 +1 1601212..1602456 + 414 148240084 folC SynWH7803_1748 - FolC bifunctional protein (folylpolyglutamate synthase / dihydrofolate synthase) 1749 62.10 0 1602479..1603003 + 174 148240085 - SynWH7803_1749 - pentapeptide repeat-containing protein 1750 65.09 0 1602993..1604324 - 443 148240086 - SynWH7803_1750 - FAD/FMN-containing dehydrogenase 1751 66.83 +1 1604352..1605581 - 409 148240087 codA SynWH7803_1751 - cytosine deaminase 1752 64.61 0 1605578..1606063 - 161 148240088 - SynWH7803_1752 - hypothetical protein 1753 64.60 0 1606138..1607199 - 353 148240089 - SynWH7803_1753 - hypothetical protein 1754 63.34 0 1607199..1608281 - 360 148240090 - SynWH7803_1754 - L-alanine-DL-glutamate epimerase 1755 61.90 0 1608409..1609773 + 454 148240091 miaB SynWH7803_1755 - 2-methylthioadenine synthetase 1756 63.75 0 1609812..1610873 + 353 148240092 ddl SynWH7803_1756 - D-alanine--D-alanine ligase 1757 60.05 0 1610902..1611309 + 135 148240093 - SynWH7803_1757 - hypothetical protein 1758 63.85 0 1611309..1612160 + 283 148240094 ftsQ SynWH7803_1758 - cell division protein FtsQ 1759 61.23 0 1612267..1613388 + 373 148240095 ftsZ SynWH7803_1759 - cell division protein FtsZ 1760 63.61 0 1613580..1614398 + 272 148240096 panB SynWH7803_1760 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1761 65.05 0 1614274..1615572 - 432 148240097 hemN SynWH7803_1761 - oxygen independent coproporphyrinogen III oxidase 1762 62.68 0 1615596..1616798 + 400 148240098 - SynWH7803_1762 - integral membrane protein 1763 59.38 0 1616829..1617500 + 223 148240099 clpP SynWH7803_1763 - ATP-dependent Clp protease-like protein 1764 59.54 0 1617546..1618148 + 200 148240100 clpP SynWH7803_1764 - ATP-dependent Clp protease proteolytic subunit 1765 60.84 0 1618205..1619200 + 331 148240101 ilvC SynWH7803_1765 - ketol-acid reductoisomerase 1766 65.76 +1 1619229..1620224 + 331 148240102 cobD/cbiB SynWH7803_1766 - cobalamin biosynthesis protein CobD/CbiB 1767 60.68 0 1620240..1620974 - 244 148240103 - SynWH7803_1767 - sugar transferase 1768 55.81 0 1621195..1621452 + 85 148240104 - SynWH7803_1768 - hypothetical protein 1769 67.18 +1 1621592..1623547 - 651 148240105 - SynWH7803_1769 - membrane metal-binding protein 1770 61.73 0 1623601..1624491 - 296 148240106 glyQ SynWH7803_1770 - glycyl-tRNA synthetase subunit alpha 1771 61.21 0 1624541..1624888 - 115 148240107 - SynWH7803_1771 - hypothetical protein 1772 64.10 0 1624975..1625676 - 233 148240108 ubiE SynWH7803_1772 - menaquinone biosynthesis methyltransferase ubiE 1773 55.56 0 1625673..1625906 - 77 148240109 - SynWH7803_1773 - hypothetical protein 1774 62.75 0 1625964..1626755 - 263 148240110 hisF SynWH7803_1774 - imidazole glycerol phosphate synthase subunit HisF 1775 56.62 0 1626810..1627028 + 72 148240111 - SynWH7803_1775 - hypothetical protein 1776 60.27 0 1627040..1627993 + 317 148240112 chlG SynWH7803_1776 - bacteriochlorophyll/chlorophyll a synthase 1777 63.04 0 1627990..1630029 + 679 148240113 - SynWH7803_1777 - glycosyltransferase 1778 66.74 +1 1630007..1631350 - 447 148240114 rsmB SynWH7803_1778 - ribosomal RNA small subunit methyltransferase B 1779 56.93 0 1631487..1633109 + 540 148240115 - SynWH7803_1779 - porin-like protein 1780 62.81 0 1633038..1633478 - 146 148240116 - SynWH7803_1780 - methylated DNA-protein cysteine methyltransferase 1781 67.87 +1 1633478..1633810 - 110 148240117 - SynWH7803_1781 - hypothetical protein 1782 64.35 0 1633953..1634642 + 229 148240118 spoU SynWH7803_1782 - tRNA (guanosine-2'-O-)-methyltransferase 1783 61.67 0 1634693..1635412 + 239 148240119 - SynWH7803_1783 - glutaredoxine domain-containing protein 1784 62.45 0 1635447..1635707 - 86 148240120 - SynWH7803_1784 - hypothetical protein 1785 65.86 +1 1635728..1636600 - 290 148240121 dppC SynWH7803_1785 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component 1786 64.47 0 1636666..1638075 + 469 148240122 - SynWH7803_1786 - two-component system sensor histidine kinase 1787 61.29 0 1638075..1638446 + 123 148240123 - SynWH7803_1787 - hypothetical protein 1788 63.87 0 1638394..1639857 - 487 148240124 - SynWH7803_1788 - two-component system sensor histidine kinase 1789 63.95 0 1639951..1640538 - 195 148240125 - SynWH7803_1789 - hypothetical protein 1790 67.80 +1 1640546..1641073 - 175 148240126 - SynWH7803_1790 - pili subunit superfamily protein 1791 66.67 +1 1641070..1641474 - 134 148240127 - SynWH7803_1791 - hypothetical protein 1792 70.08 +2 1641474..1641971 - 165 148240128 - SynWH7803_1792 - hypothetical protein 1793 63.84 0 1642048..1642755 + 235 148240129 - SynWH7803_1793 - two-component system response regulator 1794 64.80 0 1642730..1644016 - 428 148240130 - SynWH7803_1794 - two-component system sensor histidine kinase 1795 49.68 -2 1644150..1644614 + 154 148240131 - SynWH7803_1795 - pili subunit superfamily protein 1796 47.42 -2 1644983..1645486 + 167 148240132 - SynWH7803_1796 - pili subunit superfamily protein 1797 47.24 -2 1645501..1647477 + 658 148240133 - SynWH7803_1797 - hypothetical protein 1798 48.64 -2 1647606..1648121 + 171 148240134 - SynWH7803_1798 - pili subunit superfamily protein 1799 47.04 -2 1648118..1648810 + 230 148240135 - SynWH7803_1799 - pili subunit superfamily protein 60.32 MEAN 4.87 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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