version 1.0
Synechococcus sp. WH 7803, complete genome - 1..2366980 2533 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 57 60.61 0 56897..57490 - 197 148238393 - SynWH7803_0057 - TPR repeat-containing protein 58 61.78 0 57525..57872 - 115 148238394 rplT SynWH7803_0058 - 50S ribosomal protein L20 59 62.12 0 57916..58113 - 65 148238395 rpmI SynWH7803_0059 - 50S ribosomal protein L35 60 68.50 +1 58173..59750 + 525 148238396 - SynWH7803_0060 - SpoIID sporulation protein 61 64.42 0 59781..61115 + 444 148238397 - SynWH7803_0061 - glycosyl transferase family protein 62 67.74 +1 61131..62996 - 621 148238398 dnaX SynWH7803_0062 - DNA polymerase III gamma/tau subunit 63 66.96 +1 63024..63698 - 224 148238399 - SynWH7803_0063 - hypothetical protein 64 62.39 0 63703..65058 - 451 148238400 clpX SynWH7803_0064 - ATP-dependent protease ATP-binding subunit 65 63.48 0 65425..66303 + 292 148238401 - SynWH7803_0065 - hypothetical protein 66 62.15 0 66313..67197 + 294 148238402 - SynWH7803_0066 - hypothetical protein 67 67.22 +1 67241..68863 + 540 148238403 - SynWH7803_0067 - monoamine oxidase 68 66.75 +1 68830..70071 - 413 148238404 - SynWH7803_0068 - hypothetical protein 69 61.95 0 70114..70749 + 211 148238405 - SynWH7803_0069 - hypothetical protein 70 62.46 0 70751..71440 - 229 148238406 clpP SynWH7803_0070 - protease subunit of ATP-dependent Clp protease 71 64.45 0 71487..72932 - 481 148238407 tig SynWH7803_0071 - trigger factor 72 64.24 0 73098..74126 + 342 148238408 asd SynWH7803_0072 - aspartate-semialdehyde dehydrogenase 73 64.91 0 74133..75041 + 302 148238409 dapA SynWH7803_0073 - dihydrodipicolinate synthase 74 65.30 +1 75108..77150 + 680 148238410 - SynWH7803_0074 - metallo-beta-lactamase superfamily hydrolase 75 64.71 0 77153..77818 - 221 148238411 - SynWH7803_0075 - hypothetical protein 76 68.28 +1 77824..78876 - 350 148238412 mesJ SynWH7803_0076 - tRNA(Ile)-lysidine synthase 77 69.76 +1 78916..79692 + 258 148238413 - SynWH7803_0077 - hypothetical protein 78 64.60 0 79755..80141 + 128 148238414 - SynWH7803_0078 - hypothetical protein 79 67.96 +1 80134..80676 + 180 148238415 - SynWH7803_0079 - hypothetical protein 80 61.95 0 80713..82749 + 678 148238416 uvrB SynWH7803_0080 - excinuclease ABC subunit B 81 69.05 +1 82767..84569 - 600 148238417 lysC SynWH7803_0081 - aspartate kinase 82 67.38 +1 84625..85605 - 326 148238418 holA SynWH7803_0082 - DNA polymerase III subunit delta 83 71.23 +2 85674..86309 + 211 148238419 cobH SynWH7803_0083 - precorrin-8X methylmutase 84 69.01 +1 86294..89026 - 910 148238420 mutS SynWH7803_0084 - DNA mismatch repair protein 85 46.15 -2 89122..90003 - 293 148238421 - SynWH7803_0085 - hypothetical protein 86 64.70 0 90026..90940 - 304 148238422 - SynWH7803_0086 - hypothetical protein 87 60.32 0 91067..91255 + 62 148238423 psbZ SynWH7803_0087 - photosystem II reaction center protein Z 88 60.08 0 91288..91773 + 161 148238424 ribH SynWH7803_0088 - riboflavin synthase subunit beta 89 37.97 -2 91897..93081 + 394 148238425 - SynWH7803_0089 - hypothetical protein 90 38.81 -2 93071..93910 - 279 148238426 - SynWH7803_0090 - glycosyltransferase 91 39.77 -2 93911..94438 - 175 148238427 - SynWH7803_0091 - hypothetical protein 92 42.23 -2 94448..95503 - 351 148238428 galE SynWH7803_0092 - UDP-glucose-4-epimerase 93 32.85 -2 95561..96175 - 204 148238429 - SynWH7803_0093 - hypothetical protein 94 33.20 -2 96399..97148 - 249 148238430 - SynWH7803_0094 - hypothetical protein 95 33.23 -2 97155..98078 - 307 148238431 - SynWH7803_0095 - hypothetical protein 96 34.26 -2 98537..99292 - 251 148238432 - SynWH7803_0096 - hypothetical protein 97 37.76 -2 100017..100739 - 240 148238433 - SynWH7803_0097 - hypothetical protein 98 66.67 +1 101009..101464 - 151 148238434 - SynWH7803_0098 - acetyltransferase 99 67.77 +1 101493..102401 - 302 148238435 - SynWH7803_0099 - hypothetical protein 100 67.27 +1 102513..102677 + 54 148238436 - SynWH7803_0100 - hypothetical protein 101 65.15 0 102623..102820 + 65 148238437 - SynWH7803_0101 - hypothetical protein 102 66.03 +1 102879..103820 + 313 148238438 - SynWH7803_0102 - glucose-1-phosphate thymidylyltransferase 103 67.15 +1 103810..104427 + 205 148238439 rfbC SynWH7803_0103 - dTDP-4-dehydrorhamnose 3,5-epimerase 104 71.40 +2 104424..105311 + 295 148238440 rfbD SynWH7803_0104 - putative dTDP-4-dehydrorhamnose reductase 105 67.70 +1 105304..106653 + 449 148238441 - SynWH7803_0105 - sugar transferase 106 57.03 0 106766..108073 + 435 148238442 - SynWH7803_0106 - Zn-dependent metalloprotease 107 56.98 0 108146..109177 + 343 148238443 rfbB SynWH7803_0107 - dTDP-glucose-4,6-dehydratase 108 45.27 -2 109338..109940 + 200 148238444 - SynWH7803_0108 - hypothetical protein 109 46.70 -2 110048..111349 - 433 148238445 - SynWH7803_0109 - hypothetical protein 110 54.51 -1 111312..111599 - 95 148238446 - SynWH7803_0110 - N-terminal part of GDP-fucose synthetase 111 53.71 -1 111813..117053 - 1746 148238447 - SynWH7803_0111 - atypical alkaline phosphatase with phytase-like insertion 112 47.02 -2 117737..118072 - 111 148238448 - SynWH7803_0112 - hypothetical protein 113 60.47 0 118383..119414 - 343 148238449 wcaG SynWH7803_0113 - GDP-L fucose synthetase 114 61.17 0 119419..120510 - 363 148238450 gmd SynWH7803_0114 - GDP-mannose 4,6-dehydratase 115 64.47 0 120544..121770 - 408 148238451 - SynWH7803_0115 - glycosyl transferase family protein 116 59.61 0 121767..122984 - 405 148238452 - SynWH7803_0116 - TPR repeat-containing protein 117 54.91 -1 123150..123923 + 257 148238453 - SynWH7803_0117 - hypothetical protein 118 59.85 0 123916..124854 + 312 148238454 - SynWH7803_0118 - glycosyltransferase family protein 119 57.69 0 124866..126068 + 400 148238455 - SynWH7803_0119 - glycosyl transferase family protein 120 55.41 -1 126335..127276 + 313 148238456 - SynWH7803_0120 - hypothetical protein 121 56.65 0 127295..128512 + 405 148238457 - SynWH7803_0121 - glycosyl transferase family protein 122 52.52 -1 128570..130174 + 534 148238458 - SynWH7803_0122 - hypothetical protein 123 54.54 -1 129916..133428 + 1170 148238459 - SynWH7803_0123 - hypothetical protein 124 58.06 0 133554..135644 + 696 148238460 - SynWH7803_0124 - glycosyl transferase family protein 125 58.59 0 135608..137773 - 721 148238461 - SynWH7803_0125 - glycosyl transferase family protein 126 59.46 0 137775..139523 + 582 148238462 - SynWH7803_0126 - TPR repeat-containing protein 127 58.59 0 139590..140270 + 226 148238463 - SynWH7803_0127 - hypothetical protein 128 53.80 -1 140267..143281 + 1004 148238464 - SynWH7803_0128 - ABC-type multidrug transport system, ATPase and permease components 129 48.44 -2 143379..144530 + 383 148238465 - SynWH7803_0129 - multidrug resistance efflux pump 130 55.11 -1 144555..145688 - 377 148238466 - SynWH7803_0130 - glycosyltransferase family protein 131 56.83 0 145757..146884 + 375 148238467 - SynWH7803_0131 - glycosyltransferase family protein 132 50.46 -2 146894..147757 - 287 148238468 - SynWH7803_0132 - hypothetical protein 133 57.65 0 147760..149190 - 476 148238469 - SynWH7803_0133 - sulfotransferase 134 56.39 0 149622..150779 + 385 148238470 - SynWH7803_0134 - hypothetical protein 135 68.67 +1 150932..152077 + 381 148238471 - SynWH7803_0135 - glycosyl transferase family protein 136 62.50 0 152145..152888 + 247 148238472 - SynWH7803_0136 - ABC-type polysaccharide/polyol phosphate transport system, ATPase component 137 59.03 0 152888..153712 + 274 148238473 - SynWH7803_0137 - ABC-type polysaccharide/polyol phosphate export systems, permease component 138 65.49 +1 153712..154812 + 366 148238474 - SynWH7803_0138 - glycosyl transferase family protein 139 60.28 0 154785..156380 - 531 148238475 - SynWH7803_0139 - glycosyl transferase family protein 140 59.84 0 156377..157357 - 326 148238476 - SynWH7803_0140 - glycosyl transferase family protein 141 64.37 0 157511..160378 + 955 148238477 secA SynWH7803_0141 - preprotein translocase subunit SecA 142 66.26 +1 160398..161141 - 247 148238478 cysE SynWH7803_0142 - Serine acetyltransferase 143 67.27 +1 161197..162186 - 329 148238479 - SynWH7803_0143 - transcriptional regulator 144 67.66 +1 162266..163072 + 268 148238480 - SynWH7803_0144 - putative carboxymethylenebutenolidase 145 62.90 0 163069..163731 - 220 148238481 infC SynWH7803_0145 - translation initiation factor IF-3 146 68.38 +1 163789..164721 - 310 148238482 miaA SynWH7803_0146 - tRNA delta(2)-isopentenylpyrophosphatetransferase 147 60.98 0 164838..166805 + 655 148238483 gyrB SynWH7803_0147 - DNA gyrase subunit B 148 70.50 +2 166805..167143 + 112 148238484 - SynWH7803_0148 - hypothetical protein 149 64.68 0 167136..167537 + 133 148238485 - SynWH7803_0149 - hypothetical protein 150 66.43 +1 167530..167946 + 138 148238486 crcB SynWH7803_0150 - hypothetical protein 151 64.38 0 167912..168391 - 159 148238487 - SynWH7803_0151 - glutathione peroxidase 152 63.79 0 168466..169890 + 474 148238488 mgtE SynWH7803_0152 - Mg/Co/Ni transporter MgtE 153 63.67 0 169943..171010 + 355 148238489 rpoD SynWH7803_0153 - RNA polymerase sigma factor, sigma-70 family 154 60.87 0 171026..172009 - 327 148238490 - SynWH7803_0154 - hypothetical protein 155 67.40 +1 172006..172956 - 316 148238491 - SynWH7803_0155 - alpha/beta fold family hydrolase 156 61.05 0 172946..176236 - 1096 148238492 - SynWH7803_0156 - RND family multidrug efflux protein 60.32 MEAN 4.87 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.