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Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 917 61.48 0 978360..978629 + 89 86608421 cpcD CYB_0941 - phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod 918 63.48 +1 978721..979473 + 250 86608422 cpcE-1 CYB_0942 - phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit 919 61.88 0 979490..980179 + 229 86608423 cpcF CYB_0943 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 920 59.23 0 980238..980963 + 241 86608424 cpcG1 CYB_0944 - phycobilisome rod-core linker polypeptide cpcG1 921 59.62 0 981105..981416 + 103 86608425 - CYB_0945 - hypothetical protein 922 57.45 0 981446..983149 + 567 86608426 - CYB_0946 - hypothetical protein 923 57.92 0 983149..983868 + 239 86608427 - CYB_0947 - putatve protein phosphatase 924 62.31 0 983880..984797 - 305 86608428 - CYB_0948 - histone deacetylase family protein 925 62.28 0 984929..986818 + 629 86608429 - CYB_0949 - serine/threonine protein kinase 926 61.44 0 986822..989176 + 784 86608430 - CYB_0950 - 1A family penicillin-binding protein 927 58.70 0 989823..991103 - 426 86608431 - CYB_0952 - major facilitator transporter 928 57.63 0 991147..991323 - 58 86608432 - CYB_0953 - hypothetical protein 929 58.38 0 992536..993054 - 172 86608433 - CYB_0954 - HNH endonuclease domain-containing protein 930 61.14 0 993210..995417 + 735 86608434 - CYB_0955 - glycosy hydrolase family protein 931 61.83 0 995445..996395 + 316 86608435 pip CYB_0956 - prolyl aminopeptidase 932 56.94 0 996392..996535 + 47 86608436 - CYB_0957 - hypothetical protein 933 59.21 0 996438..997175 + 245 86608437 - CYB_0958 - PDZ domain-containing protein 934 60.52 0 997207..997515 + 102 86608438 - CYB_0959 - hypothetical protein 935 64.41 +1 997526..999121 + 531 86608439 - CYB_0961 - hydantoinase/oxoprolinase family protein 936 54.93 0 999058..999534 - 158 86608440 trx-2 CYB_0960 - thioredoxin 937 56.41 0 999485..1000225 - 246 86608441 - CYB_0962 - NnrU family protein 938 56.72 0 1000294..1000695 + 133 86608442 - CYB_0963 - putative photosystem II protein 939 60.00 0 1000925..1001389 + 154 86608443 - CYB_0964 - YHS domain-containing protein 940 60.92 0 1001414..1002196 - 260 86608444 - CYB_0965 - sensor histidine kinase 941 63.17 +1 1002317..1003060 - 247 86608445 - CYB_0966 - HemK family methyltransferase 942 59.30 0 1003217..1004071 - 284 86608446 - CYB_0967 - chloroplast envelope protein translocase (CEPT or Tic-Toc) family protein 943 53.65 -1 1004569..1004760 + 63 86608447 - CYB_0968 - hypothetical protein 944 50.00 -2 1004790..1004909 + 39 86608448 - CYB_0969 - hypothetical protein 945 60.18 0 1004906..1007419 + 837 86608449 - CYB_0970 - U32 family peptidase 946 57.14 0 1007584..1008108 + 174 86608450 ilvH CYB_0971 - acetolactate synthase 3 regulatory subunit 947 61.35 0 1008126..1008764 + 212 86608451 - CYB_0972 - putative lipoprotein 948 60.84 0 1008790..1009407 - 205 86608452 - CYB_0973 - hypothetical protein 949 60.54 0 1009689..1010732 + 347 86608453 glk CYB_0974 - glucokinase 950 59.42 0 1010729..1011004 + 91 86608454 - CYB_0975 - hypothetical protein 951 59.86 0 1011012..1012010 + 332 86608455 - CYB_0976 - cyclopropane-fatty-acyl-phospholipid synthase family protein 952 63.96 +1 1012024..1013241 + 405 86608456 - CYB_0978 - 2-octaprenyl-6-methoxyphenyl hydroxylase 953 59.38 0 1013238..1014965 - 575 86608457 - CYB_0977 - hypothetical protein 954 54.69 0 1015075..1016268 + 397 86608458 - CYB_0979 - ISSoc1, transposase 955 57.96 0 1016270..1017004 - 244 86608459 - CYB_0980 - hypothetical protein 956 47.62 -2 1017099..1017203 - 34 86608460 - CYB_0981 - hypothetical protein 957 53.39 -1 1017330..1017698 - 122 86608461 - CYB_0982 - hypothetical protein 958 61.82 0 1018038..1019276 + 412 86608462 coaBC CYB_0983 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 959 55.27 0 1019366..1020172 - 268 86608463 sppA-2 CYB_0984 - signal peptide peptidase SppA, 36K type 960 62.13 0 1020247..1020951 - 234 86608464 fabG CYB_0985 - 3-ketoacyl-(acyl-carrier-protein) reductase 961 63.72 +1 1021057..1021905 - 282 86608465 ksgA CYB_0986 - dimethyladenosine transferase 962 59.47 0 1021950..1023713 - 587 86608466 - CYB_0987 - sensor histidine kinase 963 59.26 0 1023740..1024873 - 377 86608467 - CYB_0988 - PilT domain-containing protein 964 55.56 0 1025388..1025630 + 80 86608468 - CYB_0989 - NifU domain-containing protein 965 61.48 0 1025763..1026860 + 365 86608469 - CYB_0990 - membrane-associated zinc metalloprotease, putative 966 60.71 0 1026867..1027571 + 234 86608470 nth CYB_0991 - endonuclease III 967 61.59 0 1027682..1028665 + 327 86608471 - CYB_0992 - hypothetical protein 968 62.34 0 1028658..1030022 + 454 86608472 - CYB_0993 - hypothetical protein 969 61.00 0 1030047..1031633 - 528 86608473 - CYB_0994 - hypothetical protein 970 48.68 -2 1031709..1032803 - 364 86608474 - CYB_0995 - hypothetical protein 971 59.37 0 1033030..1034934 + 634 86608475 - CYB_0996 - penicillin-binding protein 972 55.31 0 1035046..1036269 - 407 86608476 - CYB_0997 - glycosyl transferase, group 2 973 62.13 0 1036444..1038936 - 830 86608477 - CYB_0998 - HDIG domain-containing protein 974 56.06 0 1039003..1039398 - 131 86608478 - CYB_0999 - hypothetical protein 975 61.48 0 1039634..1040269 - 211 86608479 - CYB_1000 - 4'-phosphopantetheinyl transferase family protein 976 61.63 0 1040370..1041839 + 489 86608480 - CYB_1001 - putative cell envelope-related function transcriptional attenuator 977 52.63 -1 1041947..1043806 + 619 86608481 htpG CYB_1003 - heat shock protein 90 978 59.83 0 1043800..1044384 - 194 86608482 ribH CYB_1002 - riboflavin synthase subunit beta 979 48.06 -2 1044645..1044773 + 42 86608483 - CYB_1004 - hypothetical protein 980 57.43 0 1044770..1046068 + 432 86608484 glnA-1 CYB_1005 - glutamine synthetase 981 61.59 0 1046132..1046998 - 288 86608485 aroE CYB_1006 - shikimate 5-dehydrogenase 982 55.16 0 1047061..1047564 - 167 86608486 - CYB_1007 - hypothetical protein 983 58.85 0 1047612..1048967 - 451 86608487 - CYB_1008 - response regulator 984 62.25 0 1049217..1049963 - 248 86608488 - CYB_1009 - putative outer membrane protein 985 55.72 0 1050250..1050450 + 66 86608489 - CYB_1010 - hypothetical protein 986 58.33 0 1050509..1050784 + 91 86608490 - CYB_1011 - hypothetical protein 987 61.33 0 1050866..1052176 + 436 86608491 hemL CYB_1012 - glutamate-1-semialdehyde aminotransferase 988 55.97 0 1052215..1052457 + 80 86608492 - CYB_1014 - hypothetical protein 989 58.74 0 1052454..1053854 - 466 86608493 chlN CYB_1013 - light-independent protochlorophyllide reductase subunit N 990 58.18 0 1053896..1054873 - 325 86608494 - CYB_1015 - protochlorophyllide oxidoreductase 991 59.27 0 1055032..1055883 - 283 86608495 chlL CYB_1016 - protochlorophyllide reductase iron-sulfur ATP-binding protein 992 63.17 +1 1056240..1057526 - 428 86608496 - CYB_1017 - resolvase family site-specific recombinase 993 61.75 0 1057548..1058462 - 304 86608497 murQ CYB_1018 - N-acetylmuramic acid-6-phosphate etherase 994 58.24 0 1058438..1058698 - 86 86608498 - CYB_1019 - hypothetical protein 995 60.19 0 1058903..1060246 + 447 86608499 - CYB_1020 - phosphoglycerate mutase family protein 996 64.37 +1 1060249..1061595 + 448 86608500 - CYB_1021 - dihydroorotase 997 59.74 0 1061684..1064512 - 942 86608501 ileS CYB_1022 - isoleucyl-tRNA synthetase 998 54.44 0 1064976..1066169 - 397 86608502 - CYB_1023 - ISSoc1, transposase 999 61.75 0 1066521..1067435 - 304 86608503 - CYB_1024 - hypothetical protein 1000 58.40 0 1067556..1067930 + 124 86608504 - CYB_1025 - rhodanese domain-containing protein 1001 61.56 0 1068088..1069890 + 600 86608505 - CYB_1026 - M24B family peptidase 1002 59.87 0 1069918..1070976 - 352 86608506 - CYB_1027 - radical SAM protein 1003 54.79 0 1071393..1072049 + 218 86608507 - CYB_1028 - hypothetical protein 1004 59.08 0 1072024..1072998 + 324 86608508 - CYB_1029 - YihY family protein 1005 64.56 +1 1073024..1074115 + 363 86608509 - CYB_1030 - Sua5/YciO/YrdC/YwlC family protein 1006 59.63 0 1074130..1074669 + 179 86608510 purE CYB_1031 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 1007 62.71 +1 1074736..1075494 + 252 86608511 - CYB_1032 - hypothetical protein 1008 59.03 0 1075819..1076499 + 226 86608512 - CYB_1033 - hypothetical protein 1009 53.52 -1 1076533..1077627 - 364 86608513 - CYB_1034 - hypothetical protein 1010 59.05 0 1077433..1077537 + 34 86608514 - CYB_1035 - hypothetical protein 1011 46.37 -2 1077777..1078727 - 316 86608515 - CYB_1036 - hypothetical protein 1012 52.76 -1 1078724..1079557 - 277 86608516 - CYB_1037 - hypothetical protein 1013 61.01 0 1079568..1080521 - 317 86608517 - CYB_1038 - L-asparaginase, thermolabile 1014 61.76 0 1080664..1081458 + 264 86608518 - CYB_1039 - cbiX protein 1015 62.58 +1 1081523..1082305 + 260 86608519 cobA CYB_1040 - uroporphyrin-III C-methyltransferase 1016 60.58 0 1082302..1083090 + 262 86608520 - CYB_1041 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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