version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 41 55.17 0 52431..53648 - 405 86607544 - CYB_0041 - ISSoc1, transposase 42 62.35 0 54109..55404 - 431 86607545 purD CYB_0043 - phosphoribosylamine--glycine ligase 43 64.01 +1 55507..56598 - 363 86607546 - CYB_0044 - glycosyl transferase, group 2 family protein 44 59.84 0 56766..58055 - 429 86607547 - CYB_0045 - HD domain-containing protein 45 63.41 +1 58144..59217 + 357 86607548 - CYB_0046 - GDSL-like lipase/acylhydrolase domain-containing protein 46 60.13 0 59247..61082 - 611 86607549 - CYB_0047 - metallo-beta-lactamase family protein 47 56.79 0 61302..62222 - 306 86607550 dapA CYB_0048 - dihydrodipicolinate synthase 48 59.17 0 62498..63124 + 208 86607551 - CYB_0049 - nitroreductase family protein 49 63.08 +1 63176..64207 - 343 86607552 trpD CYB_0050 - anthranilate phosphoribosyltransferase 50 61.88 0 64391..65770 + 459 86607553 gid CYB_0051 - tRNA (uracil-5-)-methyltransferase Gid 51 43.38 -2 65862..66269 - 135 86607554 - CYB_0052 - ISSoc13, transposase orfB 52 44.71 -2 66227..66604 - 125 86607555 - CYB_0053 - ISSoc13, transposase orfA 53 56.44 0 66823..67761 - 312 86607556 - CYB_0054 - phosphotransferase family protein 54 58.52 0 68199..68468 + 89 86607557 - CYB_0055 - hypothetical protein 55 59.46 0 68551..69216 + 221 86607558 - CYB_0056 - guanylate kinase, putative 56 59.26 0 69559..70017 + 152 86607559 - CYB_0057 - S-adenosylmethionine decarboxylase proenzyme 57 60.17 0 70137..71075 + 312 86607560 speE CYB_0058 - spermidine synthase 58 58.42 0 71168..72319 + 383 86607561 - CYB_0060 - putative UDP-sulfoquinovose synthase 59 61.40 0 72316..73227 - 303 86607562 - CYB_0059 - histone deacetylase family protein 60 52.65 -1 73285..73605 - 106 86607563 - CYB_0061 - hypothetical protein 61 53.23 -1 74202..74573 - 123 86607564 - CYB_0062 - iojap-like protein 62 57.91 0 74616..75209 - 197 86607565 - CYB_0063 - HD domain-containing protein 63 56.79 0 75214..77025 - 603 86607566 lepA CYB_0064 - GTP-binding protein LepA 64 47.16 -2 77357..77884 - 175 86607567 - CYB_0065 - hypothetical protein 65 55.42 0 78035..79021 - 328 86607568 glyQ CYB_0066 - glycyl-tRNA synthetase subunit alpha 66 58.30 0 79074..79838 - 254 86607569 - CYB_0067 - T1 family peptidase 67 63.04 +1 79887..81374 - 495 86607570 - CYB_0068 - GTP-binding protein 68 60.35 0 81528..81812 + 94 86607571 - CYB_0069 - hypothetical protein 69 62.39 0 81871..82455 + 194 86607572 - CYB_0070 - WD-40-like beta propeller repeat-containing protein 70 60.84 0 82505..83689 + 394 86607573 - CYB_0071 - succinyldiaminopimelate transaminase 71 57.22 0 83850..84548 + 232 86607574 - CYB_0072 - hypothetical protein 72 62.63 +1 84796..86109 + 437 86607575 hisD CYB_0073 - histidinol dehydrogenase 73 53.23 -1 86288..87061 + 257 86607576 - CYB_0074 - ISSoc11, transposase orfA 74 56.82 0 87267..87530 + 87 86607577 - CYB_0075 - ISSoc11, transposase orfB 75 61.93 0 87777..90329 + 850 86607578 - CYB_0076 - hypothetical protein 76 58.70 0 90396..90809 - 137 86607579 - CYB_0077 - hypothetical protein 77 58.15 0 90876..91556 + 226 86607580 - CYB_0078 - RNA pseudouridine synthase family protein 78 59.41 0 91835..93184 - 449 86607581 purA CYB_0079 - adenylosuccinate synthetase 79 62.47 0 93396..94895 - 499 86607582 - CYB_0080 - S41 family peptidase 80 55.58 0 95176..96330 + 384 86607583 - CYB_0081 - ISSoc8, transposase 81 57.51 0 96348..98018 - 556 86607584 tig CYB_0082 - trigger factor 82 57.29 0 98090..98473 - 127 86607585 - CYB_0083 - hypothetical protein 83 60.40 0 98558..99610 - 350 86607586 - CYB_0084 - cytochrome c assembly protein 84 63.16 +1 99710..101248 + 512 86607587 - CYB_0085 - hypothetical protein 85 58.89 0 101494..102624 - 376 86607588 - CYB_0086 - hypothetical protein 86 54.11 -1 102812..104029 + 405 86607589 - CYB_0087 - ISSoc1, transposase 87 61.71 0 104064..105293 + 409 86607590 xseA CYB_0088 - exodeoxyribonuclease VII large subunit 88 55.27 0 105274..105510 + 78 86607591 xseB CYB_0089 - exodeoxyribonuclease VII, small subunit 89 62.36 0 105603..106484 + 293 86607592 folD CYB_0090 - FolD bifunctional protein 90 58.72 0 107027..107731 - 234 86607593 - CYB_0091 - hypothetical protein 91 59.22 0 107841..108458 - 205 86607594 - CYB_0092 - pyridoxamine 5'-phosphate oxidase family protein 92 58.76 0 108515..109690 - 391 86607595 - CYB_0093 - acetyltransferase 93 57.95 0 110017..110670 - 217 86607596 - CYB_0094 - hypothetical protein 94 60.79 0 110944..112338 + 464 86607597 murA CYB_0095 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 95 62.08 0 112532..114667 + 711 86607598 - CYB_0096 - Slt family transglycosylase 96 60.88 0 114811..115398 + 195 86607599 sixA CYB_0097 - phosphohistidine phosphatase SixA 97 60.54 0 115467..115760 - 97 86607600 - CYB_0098 - hypothetical protein 98 60.06 0 115840..116520 + 226 86607601 - CYB_0100 - DnaJ family protein 99 59.08 0 116512..117381 - 289 86607602 - CYB_0099 - S49 family peptidase 100 60.77 0 117452..118333 - 293 86607603 - CYB_0101 - hypothetical protein 101 56.17 0 118335..119306 - 323 86607604 - CYB_0102 - beta-carotene ketolase, putative 102 57.32 0 119664..119909 + 81 86607605 psaK CYB_0103 - photosystem I reaction center protein PsaK 103 49.61 -2 120040..120168 + 42 86607606 psbK CYB_0104 - photosystem II reaction center protein K 104 58.70 0 120507..121046 - 179 86607607 - CYB_0105 - hypothetical protein 105 56.60 0 121122..121568 - 148 86607608 - CYB_0106 - hypothetical protein 106 60.34 0 121855..122913 + 352 86607609 chlI CYB_0107 - magnesium chelatase, ATPase subunit I 107 63.09 +1 122953..123651 - 232 86607610 - CYB_0108 - hypothetical protein 108 57.87 0 124060..124593 - 177 86607611 nucH CYB_0109 - thermonuclease 109 62.02 0 124796..124924 - 42 86607612 - CYB_0110 - hypothetical protein 110 61.22 0 125417..126004 + 195 86607613 - CYB_0111 - CAAX amino terminal protease family protein 111 57.71 0 126236..127117 + 293 86607614 - CYB_0112 - phospholipase/carboxylesterase family protein 112 54.84 0 127262..127912 + 216 86607615 - CYB_0113 - anti-oxidant AhpCTSA family protein 113 56.32 0 128097..128666 - 189 86607616 scpB CYB_0114 - segregation and condensation protein B 114 58.69 0 128766..130922 - 718 86607617 - CYB_0115 - NAD(P)H-quinone oxidoreductase subunit F 115 53.99 -1 130928..131140 + 70 86607618 - CYB_0116 - hypothetical protein 116 59.10 0 131259..131615 + 118 86607619 - CYB_0117 - single-strand DNA-binding protein 117 62.70 +1 131641..132396 - 251 86607620 cobK CYB_0118 - cobalt-precorrin-6x reductase 118 56.98 0 132488..133003 + 171 86607621 - CYB_0119 - hypothetical protein 119 61.44 0 133034..133855 + 273 86607622 - CYB_0120 - MOSC domain-containing protein 120 60.16 0 133905..135134 + 409 86607623 ispG CYB_0121 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 121 56.41 0 135204..135632 - 142 86607624 - CYB_0122 - hypothetical protein 122 56.85 0 135720..136391 + 223 86607625 - CYB_0123 - hypothetical protein 123 58.92 0 136597..136893 + 98 86607626 - CYB_0124 - hypothetical protein 124 57.09 0 136913..137173 - 86 86607627 grxC CYB_0125 - glutaredoxin 3 125 53.36 -1 137266..140061 - 931 86607628 polA CYB_0126 - DNA polymerase I 126 60.38 0 140385..141068 + 227 86607629 - CYB_0127 - putative polysaccharide deacetylase 127 59.16 0 141133..141891 + 252 86607630 - CYB_0128 - pspA/IM30 family protein 128 61.14 0 142155..142679 + 174 86607631 psbP CYB_0129 - photosystem II oxygen evolving complex protein PsbP 129 57.11 0 142995..143789 + 264 86607632 icc CYB_0131 - icc protein 130 63.88 +1 143786..144610 - 274 86607633 - CYB_0130 - ABC transporter, permease protein 131 64.19 +1 144607..145536 - 309 86607634 - CYB_0132 - ABC transporter, permease protein 132 60.26 0 145666..146820 + 384 86607635 - CYB_0133 - hypothetical protein 133 61.51 0 147255..148340 - 361 86607636 - CYB_0134 - polysaccharide pyruvyl-transferase 134 56.26 0 148418..149311 - 297 86607637 - CYB_0135 - hypothetical protein 135 54.32 -1 149363..149767 - 134 86607638 psbU CYB_0136 - photosystem II complex extrinsic protein precursor U 136 62.69 +1 149926..152892 + 988 86607639 gcvP CYB_0137 - glycine dehydrogenase 137 60.27 0 152926..153597 + 223 86607640 - CYB_0138 - hypothetical protein 138 60.27 0 153600..154037 + 145 86607641 - CYB_0139 - hypothetical protein 139 58.76 0 154075..154656 + 193 86607642 - CYB_0140 - AhpC/TSA family protein 140 62.98 +1 154702..156357 + 551 86607643 - CYB_0141 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.