version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 820 60.44 0 873899..876886 - 995 86608324 crm2-2 CYB_0842 - CRISPR-associated RAMP Crm2 family protein 821 55.07 0 877089..878468 - 459 86608325 - CYB_0843 - CRISPR-associated TM1812 family protein 822 54.32 -1 878454..878615 + 53 86608326 - CYB_0844 - hypothetical protein 823 53.20 -1 878590..879339 + 249 86608327 - CYB_0845 - hypothetical protein 824 56.65 0 879472..879990 - 172 86608328 - CYB_0846 - hypothetical protein 825 57.16 0 880480..881394 - 304 86608329 - CYB_0847 - putative ribosomal protein S1 826 59.18 0 881472..881912 - 146 86608330 - CYB_0848 - rrf2 family protein 827 58.03 0 882043..883038 + 331 86608331 - CYB_0849 - AAA family ATPase 828 60.35 0 883063..884091 - 342 86608332 - CYB_0850 - OppBC ABC transporter family permease 829 61.13 0 884301..885257 + 318 86608333 - CYB_0851 - NAD-dependent epimerase/dehydratase family protein 830 60.72 0 885361..886419 - 352 86608334 cobW CYB_0852 - cobalamin biosynthesis protein CobW 831 59.62 0 886556..887974 - 472 86608335 psbC CYB_0853 - photosystem II 44 kDa subunit reaction center protein 832 59.96 0 888123..889181 - 352 86608336 psbD-1 CYB_0854 - photosystem II protein D2 833 59.26 0 889659..889766 + 35 86608337 petM CYB_0855 - cytochrome b6-f complex subunit PetM 834 61.33 0 889880..890854 + 324 86608338 panE-1 CYB_0856 - 2-dehydropantoate 2-reductase 835 60.81 0 891048..891815 + 255 86608339 - CYB_0857 - short chain dehydrogenase/reductase family oxidoreductase 836 58.02 0 891888..893147 + 419 86608340 - CYB_0858 - sensor histidine kinase 837 50.00 -2 893302..893565 + 87 86608341 - CYB_0859 - LuxR family transcriptional regulator 838 48.03 -2 893829..894107 + 92 86608342 - CYB_0860 - hypothetical protein 839 56.27 0 894187..895071 - 294 86608343 - CYB_0861 - fatty acid desaturase 840 56.44 0 895382..896095 + 237 86608344 - CYB_0862 - TetR family transcriptional regulator 841 59.15 0 896539..897762 - 407 86608345 - CYB_0863 - acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein 842 56.78 0 897784..898137 - 117 86608346 - CYB_0864 - rhodanese family protein 843 59.65 0 898249..898362 + 37 86608347 - CYB_0865 - putative lipoprotein 844 49.49 -2 898828..898926 - 32 86608348 - CYB_0867 - hypothetical protein 845 59.16 0 898964..900535 + 523 86608349 - CYB_0868 - putative lipoprotein 846 54.82 0 900869..901501 - 210 86608350 - CYB_0869 - NADH dehydrogenase subunit I 847 56.40 0 901540..902601 - 353 86608351 - CYB_0870 - NADH dehydrogenase subunit H 848 60.29 0 902718..902921 - 67 86608352 - CYB_0871 - hypothetical protein 849 58.35 0 902951..904129 - 392 86608353 - CYB_0872 - NAD(P)H-quinone oxidoreductase subunit H 850 62.96 +1 904305..904628 + 107 86608354 - CYB_0873 - hypothetical protein 851 56.99 0 904686..905243 - 185 86608355 - CYB_0874 - hypothetical protein 852 58.77 0 905387..905614 - 75 86608356 - CYB_0875 - hypothetical protein 853 52.47 -1 905586..905747 - 53 86608357 - CYB_0876 - hypothetical protein 854 62.59 +1 905701..906363 + 220 86608358 ureG CYB_0877 - urease accessory protein UreG 855 61.81 0 906381..907163 + 260 86608359 ureD CYB_0878 - urease accessory protein UreD 856 58.35 0 907215..908729 + 504 86608360 - CYB_0879 - hypothetical protein 857 60.46 0 909072..909683 + 203 86608361 - CYB_0882 - hypothetical protein 858 62.53 0 909611..910528 - 305 86608362 - CYB_0881 - alpha/beta fold family hydrolase 859 56.91 0 910559..911224 - 221 86608363 - CYB_0883 - Crp/FNR family transcriptional regulator 860 61.03 0 911641..912438 + 265 86608364 surE-1 CYB_0884 - acid phosphatase SurE 861 56.36 0 912608..918244 - 1878 86608365 - CYB_0885 - putative helicase 862 50.68 -1 918277..919602 - 441 86608366 - CYB_0886 - hypothetical protein 863 55.22 0 919615..921195 - 526 86608367 - CYB_0887 - hypothetical protein 864 57.58 0 921380..921841 - 153 86608368 - CYB_0888 - hypothetical protein 865 60.12 0 921848..922504 - 218 86608369 hisH CYB_0889 - imidazole glycerol phosphate synthase subunit HisH 866 57.80 0 922573..923790 + 405 86608370 - CYB_0890 - coproporphyrinogen III oxidase 867 55.28 0 923978..924469 - 163 86608371 - CYB_0891 - nucleotide-binding protein 868 58.18 0 924587..925423 + 278 86608372 - CYB_0892 - short chain dehydrogenase/reductase family oxidoreductase 869 56.56 0 925552..925917 + 121 86608373 - CYB_0894 - FHA domain-containing protein 870 63.03 +1 925904..927250 - 448 86608374 - CYB_0893 - polysaccharide biosynthesis family protein 871 64.24 +1 927346..929199 + 617 86608375 - CYB_0895 - penicillin-binding protein 872 54.25 -1 929515..929820 + 101 86608376 hup-2 CYB_0896 - DNA-binding protein HU 873 63.05 +1 929856..930989 + 377 86608377 cobD-1 CYB_0897 - threonine-phosphate decarboxylase 874 61.06 0 931015..931674 + 219 86608378 - CYB_0898 - hypothetical protein 875 59.52 0 931957..932838 + 293 86608379 - CYB_0899 - hypothetical protein 876 62.69 +1 932848..933651 - 267 86608380 - CYB_0900 - hypothetical protein 877 61.09 0 933678..934340 - 220 86608381 purN CYB_0901 - phosphoribosylglycinamide formyltransferase 878 55.21 0 934371..934466 - 31 86608382 - CYB_0902 - hypothetical protein 879 59.46 0 934438..934659 + 73 86608383 - CYB_0903 - hypothetical protein 880 60.44 0 934708..935205 + 165 86608384 - CYB_0904 - hypothetical protein 881 59.24 0 935223..935801 + 192 86608385 aat CYB_0905 - leucyl/phenylalanyl-tRNA--protein transferase 882 56.29 0 935939..936439 + 166 86608386 - CYB_0906 - low molecular weight phosphotyrosine protein phosphatase family protein 883 46.05 -2 936730..937020 - 96 86608387 - CYB_0907 - nucleotidyltransferase domain-containing protein 884 61.39 0 940185..944147 + 1320 86608388 chlH CYB_0908 - magnesium chelatase 885 63.85 +1 944225..945076 - 283 86608389 gspO CYB_0909 - prepilin peptidase 886 56.22 0 945217..945417 - 66 86608390 - CYB_0910 - hypothetical protein 887 59.14 0 945778..948474 - 898 86608391 cphA CYB_0911 - cyanophycin synthetase 888 64.21 +1 948732..951008 + 758 86608392 - CYB_0912 - DNA internalization competence protein 889 61.40 0 951191..951475 - 94 86608393 - CYB_0913 - hypothetical protein 890 57.21 0 951715..952518 + 267 86608394 - CYB_0914 - stomatin/podocin/band 7/nephrosis.2/SPFH (stomatin) family protein 891 58.36 0 952599..953537 + 312 86608395 - CYB_0915 - HflC/HflK family protein 892 60.43 0 953731..954756 + 341 86608396 - CYB_0917 - response regulator 893 62.34 0 954734..955426 - 230 86608397 - CYB_0916 - ComF family protein 894 60.78 0 955636..956043 + 135 86608398 rpsL CYB_0918 - 30S ribosomal protein S12 895 61.78 0 956127..956597 + 156 86608399 rpsG CYB_0919 - 30S ribosomal protein S7 896 58.10 0 956750..958873 + 707 86608400 fusA CYB_0920 - elongation factor G 897 58.54 0 958905..960134 + 409 86608401 tuf CYB_0921 - elongation factor Tu 898 55.97 0 960259..960576 + 105 86608402 rpsJ CYB_0922 - 30S ribosomal protein S10 899 61.56 0 960698..961558 + 286 86608403 dapB CYB_0924 - dihydrodipicolinate reductase 900 63.40 +1 961555..962472 - 305 86608404 - CYB_0923 - methylenetetrahydrofolate reductase family protein 901 64.60 +1 962550..964145 - 531 86608405 - CYB_0925 - hypothetical protein 902 62.42 0 964370..965122 - 250 86608406 - CYB_0926 - hypothetical protein 903 63.68 +1 965343..966683 - 446 86608407 - CYB_0927 - oxidoreductase, FAD-dependent 904 61.30 0 966778..967392 - 204 86608408 - CYB_0928 - hypothetical protein 905 60.79 0 967382..968164 - 260 86608409 tatC CYB_0929 - Sec-independent protein translocase TatC 906 61.21 0 968327..969535 - 402 86608410 - CYB_0930 - polar amino acid ABC transporter permease 907 61.89 0 969539..970711 - 390 86608411 - CYB_0931 - polar amino acid ABC transporter permease 908 60.02 0 970810..971847 - 345 86608412 - CYB_0932 - polar amino acid ABC transporter periplasmic amino acid-binding protein 909 55.89 0 972111..972899 + 262 86608413 - CYB_0933 - polar amino acid ABC transporter ATP-binding protein 910 62.19 0 972908..973756 - 282 86608414 - CYB_0934 - hypothetical protein 911 58.33 0 973785..974000 + 71 86608415 - CYB_0935 - hypothetical protein 912 63.06 +1 974140..975555 + 471 86608416 - CYB_0936 - hydrophobic amino acid uptake ABC transporter periplasmic amino acid-binding protein 913 63.60 +1 975617..976432 + 271 86608417 trpA CYB_0937 - tryptophan synthase subunit alpha 914 50.34 -1 976520..976666 - 48 86608418 - CYB_0938 - hypothetical protein 915 57.42 0 976892..977410 + 172 86608419 cpcB-1 CYB_0939 - phycocyanin, beta subunit 916 57.46 0 977556..978044 + 162 86608420 cpcA-1 CYB_0940 - phycocyanin, alpha subunit 917 61.48 0 978360..978629 + 89 86608421 cpcD CYB_0941 - phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod 918 63.48 +1 978721..979473 + 250 86608422 cpcE-1 CYB_0942 - phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit 919 61.88 0 979490..980179 + 229 86608423 cpcF CYB_0943 - phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0