version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 785 53.54 -1 833613..835700 + 695 86608289 uvrB CYB_0807 - excinuclease ABC subunit B 786 59.46 0 835786..837645 + 619 86608290 - CYB_0808 - small conductance mechanosensitive ion channel (MscS) family protein 787 60.41 0 837679..838269 + 196 86608291 - CYB_0809 - hypothetical protein 788 50.98 -1 838433..839815 - 460 86608292 - CYB_0810 - proton extrusion protein PcxA 789 59.26 0 839996..841399 - 467 86608293 - CYB_0811 - glycosyl transferase, group 2 family protein 790 54.70 0 841656..841772 - 38 86608294 psbX CYB_0812 - photosystem II reaction center protein PsbX 791 50.98 -1 841877..842233 - 118 86608295 - CYB_0813 - ferredoxin-thioredoxin reductase, catalytic beta subunit 792 61.86 0 842718..843944 - 408 86608296 - CYB_0814 - ISSoc9, transposase 793 58.64 0 844279..844764 + 161 86608297 - CYB_0815 - iron-sulfur cluster-binding protein 794 60.68 0 844860..846245 + 461 86608298 - CYB_0816 - carbohydrate kinase 795 58.67 0 846704..846928 - 74 86608299 - CYB_0817 - hypothetical protein 796 60.14 0 846925..848778 - 617 86608300 - CYB_0818 - S8A family peptidase 797 58.33 0 848999..849694 + 231 86608301 - CYB_0819 - MotA/TolQ/ExbB family proton transporter 798 59.62 0 849698..850123 + 141 86608302 sll1405 CYB_0820 - ExbD/TolR family proton transporter 799 62.86 +1 850394..851338 - 314 86608303 argF CYB_0821 - ornithine carbamoyltransferase 800 59.49 0 851516..852811 - 431 86608304 prc-1 CYB_0822 - C-terminal processing peptidase 801 61.77 0 853143..854510 + 455 86608305 proA CYB_0823 - gamma-glutamyl phosphate reductase 802 57.77 0 854764..855291 + 175 86608306 - CYB_0824 - putative RNA-binding protein 803 58.87 0 855383..856177 + 264 86608307 - CYB_0825 - DSBA thioredoxin domain-containing protein 804 63.65 +1 856504..857697 - 397 86608308 - CYB_0826 - sporulation and cell division repeat-containing protein 805 58.47 0 858031..858567 - 178 86608309 - CYB_0827 - hypothetical protein 806 62.81 +1 858587..861259 + 890 86608310 recJ-1 CYB_0828 - single-stranded-DNA-specific exonuclease RecJ 807 60.06 0 861249..861914 + 221 86608311 - CYB_0829 - Ser/Thr protein phosphatase family protein superfamily 808 61.60 0 861973..862584 + 203 86608312 rdgB CYB_0830 - non-canonical purine NTP pyrophosphatase 809 62.33 0 862696..863940 + 414 86608313 - CYB_0831 - hypothetical protein 810 65.22 +1 863963..864583 + 206 86608314 tmk CYB_0832 - thymidylate kinase 811 58.69 0 865060..866037 + 325 86608315 - CYB_0833 - CHAD domain-containing protein 812 55.56 0 867437..867715 - 92 86608316 cas2 CYB_0834 - CRISPR-associated Cas2 family protein 813 51.01 -1 867715..868704 - 329 86608317 cas1 CYB_0835 - CRISPR-associated Cas1 family protein 814 50.00 -2 868704..869003 - 99 86608318 - CYB_0836 - hypothetical protein 815 52.96 -1 869033..870856 - 607 86608319 - CYB_0837 - CRISPR-associated RAMP family protein 816 50.93 -1 870887..871528 - 213 86608320 - CYB_0838 - hypothetical protein 817 50.64 -1 871528..871920 - 130 86608321 - CYB_0839 - hypothetical protein 818 53.70 -1 871945..872715 - 256 86608322 cmr4 CYB_0840 - CRISPR-associated RAMP Cmr4 family protein family protein 819 62.81 +1 872763..873902 - 379 86608323 - CYB_0841 - hypothetical protein 820 60.44 0 873899..876886 - 995 86608324 crm2-2 CYB_0842 - CRISPR-associated RAMP Crm2 family protein 821 55.07 0 877089..878468 - 459 86608325 - CYB_0843 - CRISPR-associated TM1812 family protein 822 54.32 -1 878454..878615 + 53 86608326 - CYB_0844 - hypothetical protein 823 53.20 -1 878590..879339 + 249 86608327 - CYB_0845 - hypothetical protein 824 56.65 0 879472..879990 - 172 86608328 - CYB_0846 - hypothetical protein 825 57.16 0 880480..881394 - 304 86608329 - CYB_0847 - putative ribosomal protein S1 826 59.18 0 881472..881912 - 146 86608330 - CYB_0848 - rrf2 family protein 827 58.03 0 882043..883038 + 331 86608331 - CYB_0849 - AAA family ATPase 828 60.35 0 883063..884091 - 342 86608332 - CYB_0850 - OppBC ABC transporter family permease 829 61.13 0 884301..885257 + 318 86608333 - CYB_0851 - NAD-dependent epimerase/dehydratase family protein 830 60.72 0 885361..886419 - 352 86608334 cobW CYB_0852 - cobalamin biosynthesis protein CobW 831 59.62 0 886556..887974 - 472 86608335 psbC CYB_0853 - photosystem II 44 kDa subunit reaction center protein 832 59.96 0 888123..889181 - 352 86608336 psbD-1 CYB_0854 - photosystem II protein D2 833 59.26 0 889659..889766 + 35 86608337 petM CYB_0855 - cytochrome b6-f complex subunit PetM 834 61.33 0 889880..890854 + 324 86608338 panE-1 CYB_0856 - 2-dehydropantoate 2-reductase 835 60.81 0 891048..891815 + 255 86608339 - CYB_0857 - short chain dehydrogenase/reductase family oxidoreductase 836 58.02 0 891888..893147 + 419 86608340 - CYB_0858 - sensor histidine kinase 837 50.00 -2 893302..893565 + 87 86608341 - CYB_0859 - LuxR family transcriptional regulator 838 48.03 -2 893829..894107 + 92 86608342 - CYB_0860 - hypothetical protein 839 56.27 0 894187..895071 - 294 86608343 - CYB_0861 - fatty acid desaturase 840 56.44 0 895382..896095 + 237 86608344 - CYB_0862 - TetR family transcriptional regulator 841 59.15 0 896539..897762 - 407 86608345 - CYB_0863 - acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase family protein 842 56.78 0 897784..898137 - 117 86608346 - CYB_0864 - rhodanese family protein 843 59.65 0 898249..898362 + 37 86608347 - CYB_0865 - putative lipoprotein 844 49.49 -2 898828..898926 - 32 86608348 - CYB_0867 - hypothetical protein 845 59.16 0 898964..900535 + 523 86608349 - CYB_0868 - putative lipoprotein 846 54.82 0 900869..901501 - 210 86608350 - CYB_0869 - NADH dehydrogenase subunit I 847 56.40 0 901540..902601 - 353 86608351 - CYB_0870 - NADH dehydrogenase subunit H 848 60.29 0 902718..902921 - 67 86608352 - CYB_0871 - hypothetical protein 849 58.35 0 902951..904129 - 392 86608353 - CYB_0872 - NAD(P)H-quinone oxidoreductase subunit H 850 62.96 +1 904305..904628 + 107 86608354 - CYB_0873 - hypothetical protein 851 56.99 0 904686..905243 - 185 86608355 - CYB_0874 - hypothetical protein 852 58.77 0 905387..905614 - 75 86608356 - CYB_0875 - hypothetical protein 853 52.47 -1 905586..905747 - 53 86608357 - CYB_0876 - hypothetical protein 854 62.59 +1 905701..906363 + 220 86608358 ureG CYB_0877 - urease accessory protein UreG 855 61.81 0 906381..907163 + 260 86608359 ureD CYB_0878 - urease accessory protein UreD 856 58.35 0 907215..908729 + 504 86608360 - CYB_0879 - hypothetical protein 857 60.46 0 909072..909683 + 203 86608361 - CYB_0882 - hypothetical protein 858 62.53 0 909611..910528 - 305 86608362 - CYB_0881 - alpha/beta fold family hydrolase 859 56.91 0 910559..911224 - 221 86608363 - CYB_0883 - Crp/FNR family transcriptional regulator 860 61.03 0 911641..912438 + 265 86608364 surE-1 CYB_0884 - acid phosphatase SurE 861 56.36 0 912608..918244 - 1878 86608365 - CYB_0885 - putative helicase 862 50.68 -1 918277..919602 - 441 86608366 - CYB_0886 - hypothetical protein 863 55.22 0 919615..921195 - 526 86608367 - CYB_0887 - hypothetical protein 864 57.58 0 921380..921841 - 153 86608368 - CYB_0888 - hypothetical protein 865 60.12 0 921848..922504 - 218 86608369 hisH CYB_0889 - imidazole glycerol phosphate synthase subunit HisH 866 57.80 0 922573..923790 + 405 86608370 - CYB_0890 - coproporphyrinogen III oxidase 867 55.28 0 923978..924469 - 163 86608371 - CYB_0891 - nucleotide-binding protein 868 58.18 0 924587..925423 + 278 86608372 - CYB_0892 - short chain dehydrogenase/reductase family oxidoreductase 869 56.56 0 925552..925917 + 121 86608373 - CYB_0894 - FHA domain-containing protein 870 63.03 +1 925904..927250 - 448 86608374 - CYB_0893 - polysaccharide biosynthesis family protein 871 64.24 +1 927346..929199 + 617 86608375 - CYB_0895 - penicillin-binding protein 872 54.25 -1 929515..929820 + 101 86608376 hup-2 CYB_0896 - DNA-binding protein HU 873 63.05 +1 929856..930989 + 377 86608377 cobD-1 CYB_0897 - threonine-phosphate decarboxylase 874 61.06 0 931015..931674 + 219 86608378 - CYB_0898 - hypothetical protein 875 59.52 0 931957..932838 + 293 86608379 - CYB_0899 - hypothetical protein 876 62.69 +1 932848..933651 - 267 86608380 - CYB_0900 - hypothetical protein 877 61.09 0 933678..934340 - 220 86608381 purN CYB_0901 - phosphoribosylglycinamide formyltransferase 878 55.21 0 934371..934466 - 31 86608382 - CYB_0902 - hypothetical protein 879 59.46 0 934438..934659 + 73 86608383 - CYB_0903 - hypothetical protein 880 60.44 0 934708..935205 + 165 86608384 - CYB_0904 - hypothetical protein 881 59.24 0 935223..935801 + 192 86608385 aat CYB_0905 - leucyl/phenylalanyl-tRNA--protein transferase 882 56.29 0 935939..936439 + 166 86608386 - CYB_0906 - low molecular weight phosphotyrosine protein phosphatase family protein 883 46.05 -2 936730..937020 - 96 86608387 - CYB_0907 - nucleotidyltransferase domain-containing protein 884 61.39 0 940185..944147 + 1320 86608388 chlH CYB_0908 - magnesium chelatase 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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