version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 521 58.63 0 547075..547995 - 306 86608025 chlG CYB_0533 - bacteriochlorophyll/chlorophyll a synthase 522 58.36 0 548802..549620 - 272 86608026 - CYB_0534 - phytanoyl-CoA dioxygenase PhyH family protein 523 61.21 0 549636..551156 - 506 86608027 trpE CYB_0535 - anthranilate synthase component I 524 53.55 -1 551297..551845 + 182 86608028 - CYB_0536 - NUDIX family hydrolase 525 61.41 0 552117..552782 + 221 86608029 - CYB_0537 - hypothetical protein 526 61.55 0 552872..553828 - 318 86608030 - CYB_0538 - M23B family peptidase 527 59.60 0 553989..555035 + 348 86608031 - CYB_0539 - hypothetical protein 528 60.04 0 555082..556122 + 346 86608032 - CYB_0540 - putative low specificity L-threonine aldolase 529 58.67 0 556212..556736 - 174 86608033 lspA CYB_0541 - lipoprotein signal peptidase 530 61.35 0 556733..556939 - 68 86608034 - CYB_0542 - hypothetical protein 531 63.49 +1 556802..556927 + 41 86608035 - CYB_0543 - hypothetical protein 532 57.22 0 556997..557377 - 126 86608036 - CYB_0544 - hypothetical protein 533 59.33 0 557377..558180 - 267 86608037 - CYB_0545 - polyamine/opine/phosphonate ABC transporter permease 534 62.76 +1 558347..558961 + 204 86608038 ruvA CYB_0546 - Holliday junction DNA helicase motor protein 535 61.58 0 558958..559566 + 202 86608039 nadD CYB_0547 - nicotinate (nicotinamide) nucleotide adenylyltransferase 536 56.02 0 559713..560867 + 384 86608040 - CYB_0548 - ISSoc8, transposase 537 59.44 0 561039..561287 - 82 86608041 psaC CYB_0549 - photosystem I subunit VII 538 58.96 0 561440..561880 + 146 86608042 - CYB_0550 - hypothetical protein 539 61.71 0 561907..562269 - 120 86608043 - CYB_0551 - hypothetical protein 540 60.59 0 562273..562914 - 213 86608044 - CYB_0552 - hypothetical protein 541 59.75 0 563050..564351 - 433 86608045 - CYB_0553 - putative gamma-glutamyl phosphate reductase 542 57.62 0 564489..564941 - 150 86608046 - CYB_0554 - hypothetical protein 543 54.41 0 564999..566426 - 475 86608047 - CYB_0555 - hypothetical protein 544 61.88 0 566647..567753 + 368 86608048 - CYB_0556 - putative glutamate--cysteine ligase 545 55.56 0 567966..568712 - 248 86608049 - CYB_0557 - hypothetical protein 546 52.14 -1 568793..569143 - 116 86608050 - CYB_0558 - hypothetical protein 547 60.16 0 569327..569710 + 127 86608051 - CYB_0559 - putative endoribonuclease L-PSP 548 62.96 +1 569728..569997 - 89 86608052 - CYB_0560 - hypothetical protein 549 60.29 0 570229..571530 + 433 86608053 - CYB_0561 - drug:H+ antiporter-1 family protein 550 59.50 0 571691..572527 + 278 86608054 - CYB_0562 - SpoIID/LytB domain-containing protein 551 51.26 -1 572901..573218 + 105 86608055 - CYB_0563 - hypothetical protein 552 58.64 0 573326..574858 + 510 86608056 - CYB_0564 - UvrD/Rep family helicase 553 59.15 0 575034..575858 - 274 86608057 menB CYB_0565 - naphthoate synthase 554 63.27 +1 575976..577478 - 500 86608058 cobA/hemD CYB_0566 - uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 555 63.74 +1 577614..577784 - 56 86608059 - CYB_0567 - hypothetical protein 556 63.50 +1 577660..578670 + 336 86608060 - CYB_0569 - taurine ABC transporter periplasmic substrate-binding protein 557 60.49 0 578667..579200 - 177 86608061 - CYB_0568 - putative phycobilisome linker polypeptide 558 57.06 0 579742..580272 + 176 86608062 - CYB_0571 - iron-sulfur cluster-binding protein 559 43.70 -2 580213..580347 - 44 86608063 - CYB_0570 - hypothetical protein 560 55.07 0 580504..581184 + 226 86608064 - CYB_0572 - putative bacteriochlorophyll 4-vinyl reductase 561 57.80 0 581244..581525 + 93 86608065 - CYB_0573 - hypothetical protein 562 59.09 0 581587..582180 + 197 86608066 - CYB_0574 - hypothetical protein 563 54.14 -1 582205..582675 + 156 86608067 - CYB_0575 - phycobilisome protein 564 61.59 0 582864..583553 + 229 86608068 - CYB_0576 - V4R domain-containing protein 565 62.29 0 583591..584298 - 235 86608069 - CYB_0577 - hypothetical protein 566 62.09 0 584583..585827 + 414 86608070 - CYB_0578 - S1C family peptidase 567 62.88 +1 586180..587103 + 307 86608071 - CYB_0579 - quaternary amine ABC transporter periplasmic substrate-binding protein 568 62.75 +1 587130..588098 + 322 86608072 - CYB_0580 - quaternary amine ABC transporter ATP-binding protein 569 63.43 +1 588095..588712 + 205 86608073 - CYB_0581 - quaternary amine ABC transporter permease 570 60.74 0 588838..589461 + 207 86608074 - CYB_0582 - RNA polymerase sigma factor 571 60.49 0 590399..591046 + 215 86608075 - CYB_0584 - VanW family protein 572 57.41 0 592183..593079 - 298 86608076 - CYB_0585 - CRISPR-associated protein APE2256 family 573 58.54 0 593129..593842 - 237 86608077 - CYB_0586 - hypothetical protein 574 60.74 0 593853..594932 - 359 86608078 - CYB_0587 - hypothetical protein 575 58.28 0 594935..595387 - 150 86608079 - CYB_0588 - hypothetical protein 576 60.45 0 595384..596364 - 326 86608080 - CYB_0589 - CRISPR-associated RAMP family protein 577 60.45 0 596531..597382 - 283 86608081 - CYB_0590 - CRISPR-associated Csm3 family protein 578 49.85 -2 597402..598049 - 215 86608082 - CYB_0591 - hypothetical protein 579 53.29 -1 598053..598493 - 146 86608083 - CYB_0592 - hypothetical protein 580 62.94 +1 598490..599722 - 410 86608084 csx10 CYB_0593 - CRISPR-associated RAMP Csx10 family protein 581 65.84 +1 599722..600444 - 240 86608085 - CYB_0594 - CRISPR-associated Csm3 family protein 582 60.88 0 600444..602654 - 736 86608086 crm2-1 CYB_0595 - CRISPR-associated RAMP Crm2 family protein 583 62.18 0 603175..604356 + 393 86608087 cas6 CYB_0596 - CRISPR-associated Cas family protein 584 56.95 0 605551..606744 + 397 86608088 - CYB_0598 - ISSoc1, transposase 585 58.78 0 606716..608173 - 485 86608089 - CYB_0597 - hypothetical protein 586 61.51 0 608339..609307 + 322 86608090 csx3 CYB_0599 - CRISPR-associated Csx3 family protein 587 62.63 +1 609411..610202 + 263 86608091 - CYB_0600 - ADP-ribosylglycohydrolase family protein 588 55.74 0 610278..611165 - 295 86608092 - CYB_0601 - nitrate ABC transporter, ATP-binding protein NtrD 589 57.01 0 611237..613234 - 665 86608093 ntrC-2 CYB_0602 - nitrate ABC transporter, ATP-binding proteins NtrC 590 52.42 -1 613303..614130 - 275 86608094 ntrB-2 CYB_0603 - nitrate ABC transporter, permease protein 591 57.55 0 614652..615956 - 434 86608095 - CYB_0604 - nitrate/nitrite/cyanate ABC transporter periplasmic substrate-binding protein 592 61.93 0 616167..617264 + 365 86608096 - CYB_0605 - putative tocopherol cyclase 593 60.93 0 617632..620106 + 824 86608097 clpC CYB_0607 - Clp protease, ATP-binding subunit ClpC 594 56.13 0 620234..620869 + 211 86608098 clpP-1 CYB_0608 - ATP-dependent Clp protease-like protein 595 57.03 0 621483..622094 + 203 86608099 clpP CYB_0610 - ATP-dependent Clp protease proteolytic subunit 596 61.72 0 622202..622504 + 100 86608100 - CYB_0611 - hypothetical protein 597 59.52 0 622509..623096 - 195 86608101 - CYB_0612 - hypothetical protein 598 62.72 +1 623105..624499 + 464 86608102 - CYB_0613 - malate dehydrogenase (oxaloacetate-decarboxylating) 599 60.03 0 624600..625292 - 230 86608103 - CYB_0614 - CRISPR-associated protein APE2256 family 600 59.71 0 625289..625561 - 90 86608104 - CYB_0615 - hypothetical protein 601 64.71 +1 625763..625966 + 67 86608105 - CYB_0616 - hypothetical protein 602 60.27 0 626315..626986 + 223 86608106 - CYB_0618 - hypothetical protein 603 61.35 0 626983..629181 - 732 86608107 - CYB_0617 - C14 family peptidase 604 56.90 0 629485..630702 + 405 86608108 - CYB_0620 - ISSoc1, transposase 605 57.80 0 630674..630955 - 93 86608109 - CYB_0619 - hypothetical protein 606 57.14 0 631020..631208 - 62 86608110 - CYB_0621 - hypothetical protein 607 59.06 0 631292..633211 + 639 86608111 - CYB_0623 - hypothetical protein 608 57.89 0 633208..633606 - 132 86608112 - CYB_0622 - hypothetical protein 609 59.37 0 634116..635006 + 296 86608113 tyrA CYB_0624 - prephenate dehydrogenase 610 59.87 0 635075..635824 + 249 86608114 - CYB_0625 - cytochrome c biogenesis membrane protein 611 58.30 0 635936..637345 + 469 86608115 - CYB_0626 - cytochrome c-type biogenesis protein ResB, putative 612 56.70 0 637687..637947 + 86 86608116 - CYB_0628 - ferredoxin-thioredoxin reductase, variable subunit 613 55.91 0 637944..638417 - 157 86608117 - CYB_0627 - hypothetical protein 614 55.28 0 638440..638562 + 40 86608118 - CYB_0629 - hypothetical protein 615 55.83 0 638633..639850 + 405 86608119 - CYB_0630 - ISSoc1, transposase 616 60.46 0 639992..641908 + 638 86608120 hflB CYB_0631 - cell division protein FtsH 617 59.85 0 642012..644168 - 718 86608121 - CYB_0632 - alpha-glucan phosphorylase, putative 618 60.24 0 644667..645770 - 367 86608122 - CYB_0633 - SpoIID/LytB domain-containing protein 619 57.81 0 645805..645996 - 63 86608123 - CYB_0634 - hypothetical protein 620 65.89 +1 646125..646640 - 171 86608124 - CYB_0635 - cytidine and deoxycytidylate deaminase family protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0