version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 4 61.67 0 3372..5294 - 640 86607507 - CYB_0004 - FtsH family metalloprotease 5 63.47 +1 5431..6306 - 291 86607508 - CYB_0005 - short chain dehydrogenase/reductase family oxidoreductase 6 51.94 -1 6297..6425 + 42 86607509 - CYB_0006 - hypothetical protein 7 59.86 0 6533..7120 + 195 86607510 - CYB_0007 - hypothetical protein 8 62.85 +1 7143..9602 - 819 86607511 - CYB_0008 - type II DNA topoisomerase, A subunit 9 52.96 -1 10813..12723 - 636 86607512 - CYB_0009 - drug resistance ATPase-1 10 54.03 -1 12864..13868 - 334 86607513 - CYB_0011 - putative phosphonate ABC transporter, phosphonate-binding protein 11 51.45 -1 14052..14774 - 240 86607514 - CYB_0012 - hypothetical protein 12 60.04 0 15045..16448 + 467 86607515 - CYB_0014 - phosphoglucomutase/phosphomannomutase family protein 13 52.25 -1 16445..16555 - 36 86607516 - CYB_0013 - hypothetical protein 14 56.21 0 17327..17938 - 203 86607517 - CYB_0015 - putative lipoprotein 15 55.98 0 18219..19631 + 470 86607518 - CYB_0016 - hypothetical protein 16 59.02 0 19691..21247 - 518 86607519 - CYB_0017 - phytoene desaturase family protein 17 54.02 -1 21294..22574 - 426 86607520 - CYB_0018 - ISSoc2, transposase 18 52.53 -1 22429..23022 - 197 86607521 - CYB_0019 - ISSoc2, resolvase 19 53.78 -1 23139..23720 - 193 86607522 - CYB_0020 - hypothetical protein 20 60.67 0 23828..26062 - 744 86607523 psaB CYB_0021 - photosystem I P700 chlorophyll a apoprotein A2 21 59.92 0 26084..28351 - 755 86607524 psaA CYB_0022 - photosystem I P700 chlorophyll a apoprotein A1 22 60.50 0 28679..30397 + 572 86607525 ureC CYB_0023 - urease subunit alpha 23 63.60 +1 30461..31567 + 368 86607526 - CYB_0024 - ABC transporter, ATP-binding protein 24 52.19 -1 31635..32228 + 197 86607527 - CYB_0025 - ISSoc2, resolvase 25 54.83 0 32083..33315 + 410 86607528 - CYB_0026 - ISSoc2, transposase 26 59.84 0 33375..34634 + 419 86607529 - CYB_0027 - hypothetical protein 27 60.15 0 34638..37646 - 1002 86607530 - CYB_0028 - sensory box histidine kinase 28 59.66 0 37665..38306 - 213 86607531 - CYB_0029 - quaternary amine ABC transporter permease 29 57.70 0 38532..39323 - 263 86607532 - CYB_0030 - hypothetical protein 30 54.12 -1 39538..40023 + 161 86607533 - CYB_0031 - hypothetical protein 31 55.41 0 40497..40718 - 73 86607534 - CYB_0032 - hypothetical protein 32 61.72 0 40889..41899 + 336 86607535 - CYB_0033 - hypothetical protein 33 62.60 +1 42092..43639 + 515 86607536 nirA CYB_0034 - ferredoxin-nitrite reductase 34 59.86 0 43701..45023 + 440 86607537 nrtA CYB_0035 - nitrate ABC transporter, periplasmic nitrate-binding protein NrtA 35 55.62 0 45169..46128 + 319 86607538 ntrB-1 CYB_0036 - nitrate ABC transporter, permease protein NrtB 36 59.79 0 46201..48192 + 663 86607539 ntrC-1 CYB_0037 - nitrate ABC transporter, ATP-binding protein NtrC 37 53.26 -1 48231..49073 + 280 86607540 ntrD CYB_0038 - nitrate ABC transporter, ATP-binding protein NtrD 38 52.26 -1 49091..49687 + 198 86607541 - CYB_0039 - hypothetical protein 39 56.51 0 49774..51909 + 711 86607542 narB CYB_0040 - nitrate reductase 40 51.10 -1 51934..52434 + 166 86607543 - CYB_0042 - hypothetical protein 41 55.17 0 52431..53648 - 405 86607544 - CYB_0041 - ISSoc1, transposase 42 62.35 0 54109..55404 - 431 86607545 purD CYB_0043 - phosphoribosylamine--glycine ligase 43 64.01 +1 55507..56598 - 363 86607546 - CYB_0044 - glycosyl transferase, group 2 family protein 44 59.84 0 56766..58055 - 429 86607547 - CYB_0045 - HD domain-containing protein 45 63.41 +1 58144..59217 + 357 86607548 - CYB_0046 - GDSL-like lipase/acylhydrolase domain-containing protein 46 60.13 0 59247..61082 - 611 86607549 - CYB_0047 - metallo-beta-lactamase family protein 47 56.79 0 61302..62222 - 306 86607550 dapA CYB_0048 - dihydrodipicolinate synthase 48 59.17 0 62498..63124 + 208 86607551 - CYB_0049 - nitroreductase family protein 49 63.08 +1 63176..64207 - 343 86607552 trpD CYB_0050 - anthranilate phosphoribosyltransferase 50 61.88 0 64391..65770 + 459 86607553 gid CYB_0051 - tRNA (uracil-5-)-methyltransferase Gid 51 43.38 -2 65862..66269 - 135 86607554 - CYB_0052 - ISSoc13, transposase orfB 52 44.71 -2 66227..66604 - 125 86607555 - CYB_0053 - ISSoc13, transposase orfA 53 56.44 0 66823..67761 - 312 86607556 - CYB_0054 - phosphotransferase family protein 54 58.52 0 68199..68468 + 89 86607557 - CYB_0055 - hypothetical protein 55 59.46 0 68551..69216 + 221 86607558 - CYB_0056 - guanylate kinase, putative 56 59.26 0 69559..70017 + 152 86607559 - CYB_0057 - S-adenosylmethionine decarboxylase proenzyme 57 60.17 0 70137..71075 + 312 86607560 speE CYB_0058 - spermidine synthase 58 58.42 0 71168..72319 + 383 86607561 - CYB_0060 - putative UDP-sulfoquinovose synthase 59 61.40 0 72316..73227 - 303 86607562 - CYB_0059 - histone deacetylase family protein 60 52.65 -1 73285..73605 - 106 86607563 - CYB_0061 - hypothetical protein 61 53.23 -1 74202..74573 - 123 86607564 - CYB_0062 - iojap-like protein 62 57.91 0 74616..75209 - 197 86607565 - CYB_0063 - HD domain-containing protein 63 56.79 0 75214..77025 - 603 86607566 lepA CYB_0064 - GTP-binding protein LepA 64 47.16 -2 77357..77884 - 175 86607567 - CYB_0065 - hypothetical protein 65 55.42 0 78035..79021 - 328 86607568 glyQ CYB_0066 - glycyl-tRNA synthetase subunit alpha 66 58.30 0 79074..79838 - 254 86607569 - CYB_0067 - T1 family peptidase 67 63.04 +1 79887..81374 - 495 86607570 - CYB_0068 - GTP-binding protein 68 60.35 0 81528..81812 + 94 86607571 - CYB_0069 - hypothetical protein 69 62.39 0 81871..82455 + 194 86607572 - CYB_0070 - WD-40-like beta propeller repeat-containing protein 70 60.84 0 82505..83689 + 394 86607573 - CYB_0071 - succinyldiaminopimelate transaminase 71 57.22 0 83850..84548 + 232 86607574 - CYB_0072 - hypothetical protein 72 62.63 +1 84796..86109 + 437 86607575 hisD CYB_0073 - histidinol dehydrogenase 73 53.23 -1 86288..87061 + 257 86607576 - CYB_0074 - ISSoc11, transposase orfA 74 56.82 0 87267..87530 + 87 86607577 - CYB_0075 - ISSoc11, transposase orfB 75 61.93 0 87777..90329 + 850 86607578 - CYB_0076 - hypothetical protein 76 58.70 0 90396..90809 - 137 86607579 - CYB_0077 - hypothetical protein 77 58.15 0 90876..91556 + 226 86607580 - CYB_0078 - RNA pseudouridine synthase family protein 78 59.41 0 91835..93184 - 449 86607581 purA CYB_0079 - adenylosuccinate synthetase 79 62.47 0 93396..94895 - 499 86607582 - CYB_0080 - S41 family peptidase 80 55.58 0 95176..96330 + 384 86607583 - CYB_0081 - ISSoc8, transposase 81 57.51 0 96348..98018 - 556 86607584 tig CYB_0082 - trigger factor 82 57.29 0 98090..98473 - 127 86607585 - CYB_0083 - hypothetical protein 83 60.40 0 98558..99610 - 350 86607586 - CYB_0084 - cytochrome c assembly protein 84 63.16 +1 99710..101248 + 512 86607587 - CYB_0085 - hypothetical protein 85 58.89 0 101494..102624 - 376 86607588 - CYB_0086 - hypothetical protein 86 54.11 -1 102812..104029 + 405 86607589 - CYB_0087 - ISSoc1, transposase 87 61.71 0 104064..105293 + 409 86607590 xseA CYB_0088 - exodeoxyribonuclease VII large subunit 88 55.27 0 105274..105510 + 78 86607591 xseB CYB_0089 - exodeoxyribonuclease VII, small subunit 89 62.36 0 105603..106484 + 293 86607592 folD CYB_0090 - FolD bifunctional protein 90 58.72 0 107027..107731 - 234 86607593 - CYB_0091 - hypothetical protein 91 59.22 0 107841..108458 - 205 86607594 - CYB_0092 - pyridoxamine 5'-phosphate oxidase family protein 92 58.76 0 108515..109690 - 391 86607595 - CYB_0093 - acetyltransferase 93 57.95 0 110017..110670 - 217 86607596 - CYB_0094 - hypothetical protein 94 60.79 0 110944..112338 + 464 86607597 murA CYB_0095 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 95 62.08 0 112532..114667 + 711 86607598 - CYB_0096 - Slt family transglycosylase 96 60.88 0 114811..115398 + 195 86607599 sixA CYB_0097 - phosphohistidine phosphatase SixA 97 60.54 0 115467..115760 - 97 86607600 - CYB_0098 - hypothetical protein 98 60.06 0 115840..116520 + 226 86607601 - CYB_0100 - DnaJ family protein 99 59.08 0 116512..117381 - 289 86607602 - CYB_0099 - S49 family peptidase 100 60.77 0 117452..118333 - 293 86607603 - CYB_0101 - hypothetical protein 101 56.17 0 118335..119306 - 323 86607604 - CYB_0102 - beta-carotene ketolase, putative 102 57.32 0 119664..119909 + 81 86607605 psaK CYB_0103 - photosystem I reaction center protein PsaK 103 49.61 -2 120040..120168 + 42 86607606 psbK CYB_0104 - photosystem II reaction center protein K 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.