version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 460 52.08 -1 476536..478557 - 673 86607963 - CYB_0469 - FkbM family methyltransferase 461 54.01 -1 478587..480641 - 684 86607964 - CYB_0470 - FkbM family methyltransferase 462 59.03 0 480813..480956 + 47 86607965 - CYB_0471 - hypothetical protein 463 56.85 0 481589..482800 + 403 86607966 - CYB_0472 - ISSoc1, transposase 464 50.44 -1 482827..483726 + 299 86607967 - CYB_0473 - 2OG-Fe(II) oxygenase family oxidoreductase 465 46.19 -2 483699..484709 + 336 86607968 - CYB_0474 - hypothetical protein 466 52.33 -1 484805..485320 - 171 86607969 - CYB_0475 - general secretion pathway protein G, putative 467 48.27 -2 485683..489318 + 1211 86607970 - CYB_0476 - FkbM family methyltransferase 468 48.15 -2 489323..489457 + 44 86607971 - CYB_0477 - hypothetical protein 469 57.23 0 489533..490051 - 172 86607972 - CYB_0478 - purine phosphoribosyltransferase, putative 470 57.65 0 490117..491037 - 306 86607973 ilvE CYB_0479 - branched-chain amino acid aminotransferase 471 50.19 -2 491706..491966 + 86 86607974 - CYB_0480 - peptidase propeptide/YPEB domain-containing protein 472 58.42 0 492232..493674 + 480 86607975 - CYB_0481 - HlyC/CorC (HCC) family transporter 473 59.92 0 493690..495231 - 513 86607976 - CYB_0482 - Orn/Lys/Arg decarboxylase 474 57.50 0 495354..495920 + 188 86607977 - CYB_0483 - hypothetical protein 475 55.33 0 496114..498204 - 696 86607978 - CYB_0484 - type IV pilus secretin PilQ, putative 476 57.12 0 498467..499168 - 233 86607979 - CYB_0485 - hypothetical protein 477 57.34 0 499168..499875 - 235 86607980 pilN CYB_0486 - type 4 fimbrial biogenesis protein PilN 478 58.53 0 499936..501054 - 372 86607981 pilM CYB_0487 - type IV pilus assembly protein PilM 479 58.86 0 501274..502899 - 541 86607982 kaiC CYB_0488 - circadian clock protein KaiC 480 53.80 -1 502928..503230 - 100 86607983 kaiB CYB_0489 - circadian clock protein KaiB 481 58.21 0 503233..504237 - 334 86607984 kaiA CYB_0490 - circadian clock protein KaiA 482 61.97 0 504359..505294 + 311 86607985 - CYB_0491 - inosine-uridine preferring nucleoside hydrolase family protein 483 62.04 0 505373..505891 + 172 86607986 pgsA CYB_0492 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 484 58.78 0 506211..506717 + 168 86607987 ruvC CYB_0493 - crossover junction endodeoxyribonuclease RuvC 485 59.94 0 506813..507466 + 217 86607988 - CYB_0494 - ATP-dependent protease La 486 53.74 -1 507475..507621 - 48 86607989 - CYB_0495 - hypothetical protein 487 60.25 0 507620..508351 + 243 86607990 - CYB_0496 - hypothetical protein 488 51.42 -1 508358..509446 + 362 86607991 - CYB_0497 - hypothetical protein 489 54.55 0 509676..510863 + 395 86607992 - CYB_0498 - hypothetical protein 490 50.88 -1 510860..510973 + 37 86607993 - CYB_0499 - hypothetical protein 491 60.14 0 511015..512409 + 464 86607994 rumA CYB_0500 - 23S rRNA (uracil-5-)-methyltransferase RumA 492 62.70 +1 513959..514663 - 234 86607996 - CYB_0502 - hypothetical protein 493 59.05 0 514667..515191 - 174 86607997 - CYB_0503 - acetyltransferase 494 56.67 0 516636..516815 + 59 86607998 - CYB_0504 - hypothetical protein 495 55.74 0 516914..518011 + 365 86607999 - CYB_0505 - polyamine transporter, periplasmic polyamine-binding protein 496 50.29 -2 518074..518244 + 56 86608000 - CYB_0506 - CAB/ELIP/HLIP family protein 497 57.89 0 518503..523083 - 1526 86608001 - CYB_0507 - sensory box histidine kinase/response regulator 498 49.74 -2 523547..523924 + 125 86608002 - CYB_0508 - hypothetical protein 499 57.66 0 524077..524187 + 36 86608003 - CYB_0510 - hypothetical protein 500 60.29 0 524190..525287 + 365 86608004 tgt CYB_0511 - queuine tRNA-ribosyltransferase 501 56.37 0 525407..526018 + 203 86608005 - CYB_0512 - hypothetical protein 502 58.45 0 526113..527378 + 421 86608006 - CYB_0513 - hypothetical protein 503 63.30 +1 527385..527681 + 98 86608007 - CYB_0514 - hypothetical protein 504 57.42 0 527704..528363 - 219 86608008 - CYB_0515 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein 505 61.62 0 528509..531463 + 984 86608009 - CYB_0516 - proline dehydrogenase/1-pyrroline-5 carboxylate dehydrogenase 506 61.25 0 531483..532535 - 350 86608010 - CYB_0517 - CsgG family protein 507 60.90 0 532982..534160 - 392 86608011 - CYB_0518 - ISSoc9, transposase 508 62.37 0 534374..535513 + 379 86608012 proB CYB_0519 - gamma-glutamyl kinase 509 60.33 0 535600..536703 - 367 86608013 - CYB_0520 - hypothetical protein 510 55.56 0 536702..536800 + 32 86608014 - CYB_0521 - hypothetical protein 511 62.24 0 536868..538766 - 632 86608015 - CYB_0522 - serine/threonine protein kinase 512 60.00 0 538941..539405 - 154 86608016 bcp-1 CYB_0523 - bacterioferritin comigratory protein 513 57.17 0 539421..539978 - 185 86608017 infC CYB_0524 - translation initiation factor IF-3 514 57.37 0 540238..540549 + 103 86608018 - CYB_0525 - hypothetical protein 515 62.34 0 540591..541976 + 461 86608019 aspA CYB_0526 - aspartate ammonia-lyase 516 57.09 0 542017..542757 + 246 86608020 - CYB_0527 - hypothetical protein 517 58.89 0 542837..544225 + 462 86608021 - CYB_0528 - sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein 518 48.07 -2 544295..544735 - 146 86608022 - CYB_0529 - ISSoc10, orfA transposase 519 53.41 -1 544793..546037 + 414 86608023 - CYB_0530 - ISSoc10, orfB transposase 520 59.31 0 546440..546901 - 153 86608024 - CYB_0532 - hypothetical protein 521 58.63 0 547075..547995 - 306 86608025 chlG CYB_0533 - bacteriochlorophyll/chlorophyll a synthase 522 58.36 0 548802..549620 - 272 86608026 - CYB_0534 - phytanoyl-CoA dioxygenase PhyH family protein 523 61.21 0 549636..551156 - 506 86608027 trpE CYB_0535 - anthranilate synthase component I 524 53.55 -1 551297..551845 + 182 86608028 - CYB_0536 - NUDIX family hydrolase 525 61.41 0 552117..552782 + 221 86608029 - CYB_0537 - hypothetical protein 526 61.55 0 552872..553828 - 318 86608030 - CYB_0538 - M23B family peptidase 527 59.60 0 553989..555035 + 348 86608031 - CYB_0539 - hypothetical protein 528 60.04 0 555082..556122 + 346 86608032 - CYB_0540 - putative low specificity L-threonine aldolase 529 58.67 0 556212..556736 - 174 86608033 lspA CYB_0541 - lipoprotein signal peptidase 530 61.35 0 556733..556939 - 68 86608034 - CYB_0542 - hypothetical protein 531 63.49 +1 556802..556927 + 41 86608035 - CYB_0543 - hypothetical protein 532 57.22 0 556997..557377 - 126 86608036 - CYB_0544 - hypothetical protein 533 59.33 0 557377..558180 - 267 86608037 - CYB_0545 - polyamine/opine/phosphonate ABC transporter permease 534 62.76 +1 558347..558961 + 204 86608038 ruvA CYB_0546 - Holliday junction DNA helicase motor protein 535 61.58 0 558958..559566 + 202 86608039 nadD CYB_0547 - nicotinate (nicotinamide) nucleotide adenylyltransferase 536 56.02 0 559713..560867 + 384 86608040 - CYB_0548 - ISSoc8, transposase 537 59.44 0 561039..561287 - 82 86608041 psaC CYB_0549 - photosystem I subunit VII 538 58.96 0 561440..561880 + 146 86608042 - CYB_0550 - hypothetical protein 539 61.71 0 561907..562269 - 120 86608043 - CYB_0551 - hypothetical protein 540 60.59 0 562273..562914 - 213 86608044 - CYB_0552 - hypothetical protein 541 59.75 0 563050..564351 - 433 86608045 - CYB_0553 - putative gamma-glutamyl phosphate reductase 542 57.62 0 564489..564941 - 150 86608046 - CYB_0554 - hypothetical protein 543 54.41 0 564999..566426 - 475 86608047 - CYB_0555 - hypothetical protein 544 61.88 0 566647..567753 + 368 86608048 - CYB_0556 - putative glutamate--cysteine ligase 545 55.56 0 567966..568712 - 248 86608049 - CYB_0557 - hypothetical protein 546 52.14 -1 568793..569143 - 116 86608050 - CYB_0558 - hypothetical protein 547 60.16 0 569327..569710 + 127 86608051 - CYB_0559 - putative endoribonuclease L-PSP 548 62.96 +1 569728..569997 - 89 86608052 - CYB_0560 - hypothetical protein 549 60.29 0 570229..571530 + 433 86608053 - CYB_0561 - drug:H+ antiporter-1 family protein 550 59.50 0 571691..572527 + 278 86608054 - CYB_0562 - SpoIID/LytB domain-containing protein 551 51.26 -1 572901..573218 + 105 86608055 - CYB_0563 - hypothetical protein 552 58.64 0 573326..574858 + 510 86608056 - CYB_0564 - UvrD/Rep family helicase 553 59.15 0 575034..575858 - 274 86608057 menB CYB_0565 - naphthoate synthase 554 63.27 +1 575976..577478 - 500 86608058 cobA/hemD CYB_0566 - uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 555 63.74 +1 577614..577784 - 56 86608059 - CYB_0567 - hypothetical protein 556 63.50 +1 577660..578670 + 336 86608060 - CYB_0569 - taurine ABC transporter periplasmic substrate-binding protein 557 60.49 0 578667..579200 - 177 86608061 - CYB_0568 - putative phycobilisome linker polypeptide 558 57.06 0 579742..580272 + 176 86608062 - CYB_0571 - iron-sulfur cluster-binding protein 559 43.70 -2 580213..580347 - 44 86608063 - CYB_0570 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0