version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 439 60.14 0 455204..455479 - 91 86607942 - CYB_0447 - hypothetical protein 440 57.08 0 455532..456011 - 159 86607943 rpsP CYB_0448 - ribosomal protein S16 441 57.05 0 456261..456707 + 148 86607944 - CYB_0449 - hypothetical protein 442 61.11 0 456830..457225 - 131 86607945 - CYB_0450 - hypothetical protein 443 59.19 0 457349..458311 + 320 86607946 sds CYB_0451 - solanesyl diphosphate synthase 444 57.46 0 458340..459143 - 267 86607947 lepB CYB_0452 - signal peptidase I 445 55.18 0 459188..459544 + 118 86607948 - CYB_0453 - hypothetical protein 446 58.45 0 459576..460622 - 348 86607949 - CYB_0454 - general secretory pathway protein, putative 447 62.22 0 460791..461510 + 239 86607950 pdxJ CYB_0455 - pyridoxal phosphate biosynthetic protein PdxJ 448 61.30 0 461525..462157 + 210 86607951 - CYB_0456 - hypothetical protein 449 61.63 0 462170..463003 + 277 86607952 - CYB_0457 - biotin--acetyl-CoA-carboxylase ligase 450 62.32 0 463030..463950 + 306 86607953 - CYB_0458 - M23B family peptidase 451 64.20 +1 464348..465361 - 337 86607954 - CYB_0460 - heptosyltransferase family protein 452 64.08 +1 465556..466713 + 385 86607955 - CYB_0461 - DegT/DnrJ/EryC1/StrS aminotransferase family protein 453 56.92 0 466819..468018 + 399 86607956 - CYB_0462 - hypothetical protein 454 51.77 -1 468123..469082 - 319 86607957 - CYB_0463 - patatin family phospholipase 455 59.78 0 469147..469785 - 212 86607958 - CYB_0464 - phosphoglycerate mutase family protein 456 60.37 0 469831..470799 - 322 86607959 ppnK CYB_0465 - inorganic polyphosphate/ATP-NAD kinase 457 59.88 0 471169..473409 + 746 86607960 - CYB_0466 - protein kinase 458 57.26 0 473993..474109 - 38 86607961 - CYB_0467 - hypothetical protein 459 49.95 -2 474361..476334 - 657 86607962 - CYB_0468 - TPR domain-containing protein 460 52.08 -1 476536..478557 - 673 86607963 - CYB_0469 - FkbM family methyltransferase 461 54.01 -1 478587..480641 - 684 86607964 - CYB_0470 - FkbM family methyltransferase 462 59.03 0 480813..480956 + 47 86607965 - CYB_0471 - hypothetical protein 463 56.85 0 481589..482800 + 403 86607966 - CYB_0472 - ISSoc1, transposase 464 50.44 -1 482827..483726 + 299 86607967 - CYB_0473 - 2OG-Fe(II) oxygenase family oxidoreductase 465 46.19 -2 483699..484709 + 336 86607968 - CYB_0474 - hypothetical protein 466 52.33 -1 484805..485320 - 171 86607969 - CYB_0475 - general secretion pathway protein G, putative 467 48.27 -2 485683..489318 + 1211 86607970 - CYB_0476 - FkbM family methyltransferase 468 48.15 -2 489323..489457 + 44 86607971 - CYB_0477 - hypothetical protein 469 57.23 0 489533..490051 - 172 86607972 - CYB_0478 - purine phosphoribosyltransferase, putative 470 57.65 0 490117..491037 - 306 86607973 ilvE CYB_0479 - branched-chain amino acid aminotransferase 471 50.19 -2 491706..491966 + 86 86607974 - CYB_0480 - peptidase propeptide/YPEB domain-containing protein 472 58.42 0 492232..493674 + 480 86607975 - CYB_0481 - HlyC/CorC (HCC) family transporter 473 59.92 0 493690..495231 - 513 86607976 - CYB_0482 - Orn/Lys/Arg decarboxylase 474 57.50 0 495354..495920 + 188 86607977 - CYB_0483 - hypothetical protein 475 55.33 0 496114..498204 - 696 86607978 - CYB_0484 - type IV pilus secretin PilQ, putative 476 57.12 0 498467..499168 - 233 86607979 - CYB_0485 - hypothetical protein 477 57.34 0 499168..499875 - 235 86607980 pilN CYB_0486 - type 4 fimbrial biogenesis protein PilN 478 58.53 0 499936..501054 - 372 86607981 pilM CYB_0487 - type IV pilus assembly protein PilM 479 58.86 0 501274..502899 - 541 86607982 kaiC CYB_0488 - circadian clock protein KaiC 480 53.80 -1 502928..503230 - 100 86607983 kaiB CYB_0489 - circadian clock protein KaiB 481 58.21 0 503233..504237 - 334 86607984 kaiA CYB_0490 - circadian clock protein KaiA 482 61.97 0 504359..505294 + 311 86607985 - CYB_0491 - inosine-uridine preferring nucleoside hydrolase family protein 483 62.04 0 505373..505891 + 172 86607986 pgsA CYB_0492 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 484 58.78 0 506211..506717 + 168 86607987 ruvC CYB_0493 - crossover junction endodeoxyribonuclease RuvC 485 59.94 0 506813..507466 + 217 86607988 - CYB_0494 - ATP-dependent protease La 486 53.74 -1 507475..507621 - 48 86607989 - CYB_0495 - hypothetical protein 487 60.25 0 507620..508351 + 243 86607990 - CYB_0496 - hypothetical protein 488 51.42 -1 508358..509446 + 362 86607991 - CYB_0497 - hypothetical protein 489 54.55 0 509676..510863 + 395 86607992 - CYB_0498 - hypothetical protein 490 50.88 -1 510860..510973 + 37 86607993 - CYB_0499 - hypothetical protein 491 60.14 0 511015..512409 + 464 86607994 rumA CYB_0500 - 23S rRNA (uracil-5-)-methyltransferase RumA 492 62.70 +1 513959..514663 - 234 86607996 - CYB_0502 - hypothetical protein 493 59.05 0 514667..515191 - 174 86607997 - CYB_0503 - acetyltransferase 494 56.67 0 516636..516815 + 59 86607998 - CYB_0504 - hypothetical protein 495 55.74 0 516914..518011 + 365 86607999 - CYB_0505 - polyamine transporter, periplasmic polyamine-binding protein 496 50.29 -2 518074..518244 + 56 86608000 - CYB_0506 - CAB/ELIP/HLIP family protein 497 57.89 0 518503..523083 - 1526 86608001 - CYB_0507 - sensory box histidine kinase/response regulator 498 49.74 -2 523547..523924 + 125 86608002 - CYB_0508 - hypothetical protein 499 57.66 0 524077..524187 + 36 86608003 - CYB_0510 - hypothetical protein 500 60.29 0 524190..525287 + 365 86608004 tgt CYB_0511 - queuine tRNA-ribosyltransferase 501 56.37 0 525407..526018 + 203 86608005 - CYB_0512 - hypothetical protein 502 58.45 0 526113..527378 + 421 86608006 - CYB_0513 - hypothetical protein 503 63.30 +1 527385..527681 + 98 86608007 - CYB_0514 - hypothetical protein 504 57.42 0 527704..528363 - 219 86608008 - CYB_0515 - 3-beta hydroxysteroid dehydrogenase/isomerase family protein 505 61.62 0 528509..531463 + 984 86608009 - CYB_0516 - proline dehydrogenase/1-pyrroline-5 carboxylate dehydrogenase 506 61.25 0 531483..532535 - 350 86608010 - CYB_0517 - CsgG family protein 507 60.90 0 532982..534160 - 392 86608011 - CYB_0518 - ISSoc9, transposase 508 62.37 0 534374..535513 + 379 86608012 proB CYB_0519 - gamma-glutamyl kinase 509 60.33 0 535600..536703 - 367 86608013 - CYB_0520 - hypothetical protein 510 55.56 0 536702..536800 + 32 86608014 - CYB_0521 - hypothetical protein 511 62.24 0 536868..538766 - 632 86608015 - CYB_0522 - serine/threonine protein kinase 512 60.00 0 538941..539405 - 154 86608016 bcp-1 CYB_0523 - bacterioferritin comigratory protein 513 57.17 0 539421..539978 - 185 86608017 infC CYB_0524 - translation initiation factor IF-3 514 57.37 0 540238..540549 + 103 86608018 - CYB_0525 - hypothetical protein 515 62.34 0 540591..541976 + 461 86608019 aspA CYB_0526 - aspartate ammonia-lyase 516 57.09 0 542017..542757 + 246 86608020 - CYB_0527 - hypothetical protein 517 58.89 0 542837..544225 + 462 86608021 - CYB_0528 - sugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein 518 48.07 -2 544295..544735 - 146 86608022 - CYB_0529 - ISSoc10, orfA transposase 519 53.41 -1 544793..546037 + 414 86608023 - CYB_0530 - ISSoc10, orfB transposase 520 59.31 0 546440..546901 - 153 86608024 - CYB_0532 - hypothetical protein 521 58.63 0 547075..547995 - 306 86608025 chlG CYB_0533 - bacteriochlorophyll/chlorophyll a synthase 522 58.36 0 548802..549620 - 272 86608026 - CYB_0534 - phytanoyl-CoA dioxygenase PhyH family protein 523 61.21 0 549636..551156 - 506 86608027 trpE CYB_0535 - anthranilate synthase component I 524 53.55 -1 551297..551845 + 182 86608028 - CYB_0536 - NUDIX family hydrolase 525 61.41 0 552117..552782 + 221 86608029 - CYB_0537 - hypothetical protein 526 61.55 0 552872..553828 - 318 86608030 - CYB_0538 - M23B family peptidase 527 59.60 0 553989..555035 + 348 86608031 - CYB_0539 - hypothetical protein 528 60.04 0 555082..556122 + 346 86608032 - CYB_0540 - putative low specificity L-threonine aldolase 529 58.67 0 556212..556736 - 174 86608033 lspA CYB_0541 - lipoprotein signal peptidase 530 61.35 0 556733..556939 - 68 86608034 - CYB_0542 - hypothetical protein 531 63.49 +1 556802..556927 + 41 86608035 - CYB_0543 - hypothetical protein 532 57.22 0 556997..557377 - 126 86608036 - CYB_0544 - hypothetical protein 533 59.33 0 557377..558180 - 267 86608037 - CYB_0545 - polyamine/opine/phosphonate ABC transporter permease 534 62.76 +1 558347..558961 + 204 86608038 ruvA CYB_0546 - Holliday junction DNA helicase motor protein 535 61.58 0 558958..559566 + 202 86608039 nadD CYB_0547 - nicotinate (nicotinamide) nucleotide adenylyltransferase 536 56.02 0 559713..560867 + 384 86608040 - CYB_0548 - ISSoc8, transposase 537 59.44 0 561039..561287 - 82 86608041 psaC CYB_0549 - photosystem I subunit VII 538 58.96 0 561440..561880 + 146 86608042 - CYB_0550 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0