version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 401 56.82 0 419275..419538 - 87 86607904 - CYB_0407 - hypothetical protein 402 59.65 0 419605..420060 - 151 86607905 - CYB_0408 - hypothetical protein 403 60.24 0 420063..420482 - 139 86607906 nifX CYB_0409 - nitrogenase cofactor biosynthesis protein NifX 404 64.05 +1 420564..421901 - 445 86607907 nifN CYB_0410 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 405 61.65 0 421901..423295 - 464 86607908 nifE CYB_0411 - nitrogenase MoFe cofactor biosynthesis protein NifE 406 59.17 0 423286..423645 - 119 86607909 - CYB_0412 - putative molybdenum-dependent nitrogenase 407 53.33 -1 423649..423873 - 74 86607910 - CYB_0413 - hypothetical protein 408 58.97 0 423916..424461 - 181 86607911 dpsA CYB_0414 - nutrient-stress induced DNA binding protein 409 61.21 0 424516..424845 - 109 86607912 - CYB_0415 - hypothetical protein 410 56.91 0 425332..425454 - 40 86607913 - CYB_0416 - hypothetical protein 411 61.66 0 425583..427019 + 478 86607914 nifB CYB_0417 - nitrogenase cofactor biosynthesis protein NifB 412 57.14 0 427045..427338 + 97 86607915 - CYB_0418 - ferredoxin, 4Fe-4S 413 63.48 +1 427382..428572 + 396 86607916 nifS CYB_0419 - cysteine desulfurase 414 60.49 0 428629..429567 + 312 86607917 nifU CYB_0420 - Fe-S cluster assembly protein NifU 415 57.68 0 429845..430723 + 292 86607918 nifH CYB_0421 - nitrogenase iron protein 416 57.58 0 430819..432282 + 487 86607919 nifD CYB_0422 - nitrogenase molybdenum-iron protein alpha chain 417 58.72 0 432348..433883 + 511 86607920 nifK CYB_0423 - nitrogenase molybdenum-iron protein beta chain 418 62.96 +1 434137..435324 + 395 86607921 aksA CYB_0424 - trans-homoaconitate synthase 419 56.00 0 435314..435463 + 49 86607922 - CYB_0425 - hypothetical protein 420 56.82 0 435460..435723 + 87 86607923 nifZ CYB_0426 - NifZ protein 421 53.73 -1 435720..435920 + 66 86607924 - CYB_0427 - NifT/FixU family protein 422 58.78 0 436073..437302 + 409 86607925 - CYB_0428 - major facilitator transporter 423 62.22 0 437528..439684 - 718 86607926 - CYB_0430 - TPR repeat-containing protein 424 60.54 0 439914..442607 + 897 86607927 - CYB_0431 - putative phycobilisome 120 kDa linker polypeptide, core 425 59.98 0 442670..443806 - 378 86607928 ruvB CYB_0432 - Holliday junction DNA helicase B 426 58.03 0 443947..445011 - 354 86607929 psbA-3 CYB_0433 - photosystem II protein D1 427 63.56 +1 445110..445817 + 235 86607930 - CYB_0434 - glycoprotease family protein 428 54.48 0 445854..446411 + 185 86607931 efp CYB_0435 - elongation factor P 429 57.59 0 446481..446954 + 157 86607932 accB CYB_0436 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 430 60.75 0 447349..448278 + 309 86607933 - CYB_0437 - Ser/Thr protein phosphatase family protein 431 59.04 0 448355..449101 + 248 86607934 cysH CYB_0438 - phosophoadenylyl-sulfate reductase 432 56.19 0 449105..449419 + 104 86607935 - CYB_0439 - antibiotic biosynthesis monooxygenase domain-containing protein 433 54.88 0 449717..450658 - 313 86607936 - CYB_0441 - phosphoribulokinase 434 56.64 0 450944..451711 + 255 86607937 - CYB_0442 - pspA/IM30 family protein 435 58.49 0 451961..452425 + 154 86607938 - CYB_0443 - pentapeptide repeat-containing protein 436 62.80 +1 452438..453265 - 275 86607939 cysQ CYB_0444 - 3'(2'),5'-bisphosphate nucleotidase 437 64.57 +1 453281..454042 - 253 86607940 hisF CYB_0445 - imidazole glycerol phosphate synthase subunit HisF 438 63.59 +1 454104..455207 - 367 86607941 - CYB_0446 - hypothetical protein 439 60.14 0 455204..455479 - 91 86607942 - CYB_0447 - hypothetical protein 440 57.08 0 455532..456011 - 159 86607943 rpsP CYB_0448 - ribosomal protein S16 441 57.05 0 456261..456707 + 148 86607944 - CYB_0449 - hypothetical protein 442 61.11 0 456830..457225 - 131 86607945 - CYB_0450 - hypothetical protein 443 59.19 0 457349..458311 + 320 86607946 sds CYB_0451 - solanesyl diphosphate synthase 444 57.46 0 458340..459143 - 267 86607947 lepB CYB_0452 - signal peptidase I 445 55.18 0 459188..459544 + 118 86607948 - CYB_0453 - hypothetical protein 446 58.45 0 459576..460622 - 348 86607949 - CYB_0454 - general secretory pathway protein, putative 447 62.22 0 460791..461510 + 239 86607950 pdxJ CYB_0455 - pyridoxal phosphate biosynthetic protein PdxJ 448 61.30 0 461525..462157 + 210 86607951 - CYB_0456 - hypothetical protein 449 61.63 0 462170..463003 + 277 86607952 - CYB_0457 - biotin--acetyl-CoA-carboxylase ligase 450 62.32 0 463030..463950 + 306 86607953 - CYB_0458 - M23B family peptidase 451 64.20 +1 464348..465361 - 337 86607954 - CYB_0460 - heptosyltransferase family protein 452 64.08 +1 465556..466713 + 385 86607955 - CYB_0461 - DegT/DnrJ/EryC1/StrS aminotransferase family protein 453 56.92 0 466819..468018 + 399 86607956 - CYB_0462 - hypothetical protein 454 51.77 -1 468123..469082 - 319 86607957 - CYB_0463 - patatin family phospholipase 455 59.78 0 469147..469785 - 212 86607958 - CYB_0464 - phosphoglycerate mutase family protein 456 60.37 0 469831..470799 - 322 86607959 ppnK CYB_0465 - inorganic polyphosphate/ATP-NAD kinase 457 59.88 0 471169..473409 + 746 86607960 - CYB_0466 - protein kinase 458 57.26 0 473993..474109 - 38 86607961 - CYB_0467 - hypothetical protein 459 49.95 -2 474361..476334 - 657 86607962 - CYB_0468 - TPR domain-containing protein 460 52.08 -1 476536..478557 - 673 86607963 - CYB_0469 - FkbM family methyltransferase 461 54.01 -1 478587..480641 - 684 86607964 - CYB_0470 - FkbM family methyltransferase 462 59.03 0 480813..480956 + 47 86607965 - CYB_0471 - hypothetical protein 463 56.85 0 481589..482800 + 403 86607966 - CYB_0472 - ISSoc1, transposase 464 50.44 -1 482827..483726 + 299 86607967 - CYB_0473 - 2OG-Fe(II) oxygenase family oxidoreductase 465 46.19 -2 483699..484709 + 336 86607968 - CYB_0474 - hypothetical protein 466 52.33 -1 484805..485320 - 171 86607969 - CYB_0475 - general secretion pathway protein G, putative 467 48.27 -2 485683..489318 + 1211 86607970 - CYB_0476 - FkbM family methyltransferase 468 48.15 -2 489323..489457 + 44 86607971 - CYB_0477 - hypothetical protein 469 57.23 0 489533..490051 - 172 86607972 - CYB_0478 - purine phosphoribosyltransferase, putative 470 57.65 0 490117..491037 - 306 86607973 ilvE CYB_0479 - branched-chain amino acid aminotransferase 471 50.19 -2 491706..491966 + 86 86607974 - CYB_0480 - peptidase propeptide/YPEB domain-containing protein 472 58.42 0 492232..493674 + 480 86607975 - CYB_0481 - HlyC/CorC (HCC) family transporter 473 59.92 0 493690..495231 - 513 86607976 - CYB_0482 - Orn/Lys/Arg decarboxylase 474 57.50 0 495354..495920 + 188 86607977 - CYB_0483 - hypothetical protein 475 55.33 0 496114..498204 - 696 86607978 - CYB_0484 - type IV pilus secretin PilQ, putative 476 57.12 0 498467..499168 - 233 86607979 - CYB_0485 - hypothetical protein 477 57.34 0 499168..499875 - 235 86607980 pilN CYB_0486 - type 4 fimbrial biogenesis protein PilN 478 58.53 0 499936..501054 - 372 86607981 pilM CYB_0487 - type IV pilus assembly protein PilM 479 58.86 0 501274..502899 - 541 86607982 kaiC CYB_0488 - circadian clock protein KaiC 480 53.80 -1 502928..503230 - 100 86607983 kaiB CYB_0489 - circadian clock protein KaiB 481 58.21 0 503233..504237 - 334 86607984 kaiA CYB_0490 - circadian clock protein KaiA 482 61.97 0 504359..505294 + 311 86607985 - CYB_0491 - inosine-uridine preferring nucleoside hydrolase family protein 483 62.04 0 505373..505891 + 172 86607986 pgsA CYB_0492 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 484 58.78 0 506211..506717 + 168 86607987 ruvC CYB_0493 - crossover junction endodeoxyribonuclease RuvC 485 59.94 0 506813..507466 + 217 86607988 - CYB_0494 - ATP-dependent protease La 486 53.74 -1 507475..507621 - 48 86607989 - CYB_0495 - hypothetical protein 487 60.25 0 507620..508351 + 243 86607990 - CYB_0496 - hypothetical protein 488 51.42 -1 508358..509446 + 362 86607991 - CYB_0497 - hypothetical protein 489 54.55 0 509676..510863 + 395 86607992 - CYB_0498 - hypothetical protein 490 50.88 -1 510860..510973 + 37 86607993 - CYB_0499 - hypothetical protein 491 60.14 0 511015..512409 + 464 86607994 rumA CYB_0500 - 23S rRNA (uracil-5-)-methyltransferase RumA 492 62.70 +1 513959..514663 - 234 86607996 - CYB_0502 - hypothetical protein 493 59.05 0 514667..515191 - 174 86607997 - CYB_0503 - acetyltransferase 494 56.67 0 516636..516815 + 59 86607998 - CYB_0504 - hypothetical protein 495 55.74 0 516914..518011 + 365 86607999 - CYB_0505 - polyamine transporter, periplasmic polyamine-binding protein 496 50.29 -2 518074..518244 + 56 86608000 - CYB_0506 - CAB/ELIP/HLIP family protein 497 57.89 0 518503..523083 - 1526 86608001 - CYB_0507 - sensory box histidine kinase/response regulator 498 49.74 -2 523547..523924 + 125 86608002 - CYB_0508 - hypothetical protein 499 57.66 0 524077..524187 + 36 86608003 - CYB_0510 - hypothetical protein 500 60.29 0 524190..525287 + 365 86608004 tgt CYB_0511 - queuine tRNA-ribosyltransferase 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0