version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 376 63.10 +1 398116..399882 - 588 86607879 - CYB_0382 - GTP-binding protein 377 53.54 -1 399966..400064 + 32 86607880 - CYB_0383 - hypothetical protein 378 52.94 -1 400143..400295 - 50 86607881 - CYB_0384 - hypothetical protein 379 43.29 -2 400347..400778 - 143 86607882 - CYB_0385 - hypothetical protein 380 47.73 -2 400775..401392 - 205 86607883 - CYB_0386 - hypothetical protein 381 51.32 -1 401389..402072 - 227 86607884 - CYB_0387 - hypothetical protein 382 58.20 0 402139..403095 - 318 86607885 - CYB_0388 - carbohydrate ABC transporter permease 383 61.71 0 403102..404151 - 349 86607886 - CYB_0389 - carbohydrate ABC transporter permease 384 61.55 0 404141..405703 - 520 86607887 - CYB_0390 - carbohydrate ABC transporter ATP-binding protein 385 57.53 0 405675..406703 - 342 86607888 - CYB_0391 - Bmp family membrane protein 386 63.14 +1 407105..408379 + 424 86607889 codA CYB_0393 - cytosine deaminase 387 59.91 0 408376..408834 - 152 86607890 - CYB_0392 - hypothetical protein 388 61.24 0 408866..409492 - 208 86607891 - CYB_0394 - 5-formyltetrahydrofolate cyclo-ligase family protein 389 61.08 0 409537..410001 - 154 86607892 - CYB_0395 - peptidyl-prolyl cis-trans isomerase, FKBP-type 390 57.71 0 410061..410741 - 226 86607893 - CYB_0396 - hypothetical protein 391 65.45 +1 410818..412713 + 631 86607894 cbiG/cobJ CYB_0397 - cbiG protein/precorrin-3B C17-methyltransferase 392 62.14 0 412730..414517 - 595 86607895 modB CYB_0398 - molybdate ABC transporter, permease protein 393 57.68 0 414555..415322 - 255 86607896 modA CYB_0399 - molybdate ABC transporter, periplasmic molybdate-binding protein 394 46.85 -2 415426..415536 - 36 86607897 - CYB_0400 - hypothetical protein 395 45.24 -2 415575..415784 + 69 86607898 - CYB_0401 - molybdenum-pterin binding domain-containing protein 396 55.29 0 415813..417465 - 550 86607899 - CYB_0402 - transcriptional regulator PatB 397 52.33 -1 417808..418065 - 85 86607900 - CYB_0403 - hypothetical protein 398 49.47 -2 418165..418542 - 125 86607901 - CYB_0404 - FeoA domain-containing protein 399 49.00 -2 418571..418870 - 99 86607902 - CYB_0405 - ferredoxin, 2Fe-2S 400 55.46 0 418913..419278 - 121 86607903 nifW CYB_0406 - nitrogenase stabilizing/protective protein nifW 401 56.82 0 419275..419538 - 87 86607904 - CYB_0407 - hypothetical protein 402 59.65 0 419605..420060 - 151 86607905 - CYB_0408 - hypothetical protein 403 60.24 0 420063..420482 - 139 86607906 nifX CYB_0409 - nitrogenase cofactor biosynthesis protein NifX 404 64.05 +1 420564..421901 - 445 86607907 nifN CYB_0410 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 405 61.65 0 421901..423295 - 464 86607908 nifE CYB_0411 - nitrogenase MoFe cofactor biosynthesis protein NifE 406 59.17 0 423286..423645 - 119 86607909 - CYB_0412 - putative molybdenum-dependent nitrogenase 407 53.33 -1 423649..423873 - 74 86607910 - CYB_0413 - hypothetical protein 408 58.97 0 423916..424461 - 181 86607911 dpsA CYB_0414 - nutrient-stress induced DNA binding protein 409 61.21 0 424516..424845 - 109 86607912 - CYB_0415 - hypothetical protein 410 56.91 0 425332..425454 - 40 86607913 - CYB_0416 - hypothetical protein 411 61.66 0 425583..427019 + 478 86607914 nifB CYB_0417 - nitrogenase cofactor biosynthesis protein NifB 412 57.14 0 427045..427338 + 97 86607915 - CYB_0418 - ferredoxin, 4Fe-4S 413 63.48 +1 427382..428572 + 396 86607916 nifS CYB_0419 - cysteine desulfurase 414 60.49 0 428629..429567 + 312 86607917 nifU CYB_0420 - Fe-S cluster assembly protein NifU 415 57.68 0 429845..430723 + 292 86607918 nifH CYB_0421 - nitrogenase iron protein 416 57.58 0 430819..432282 + 487 86607919 nifD CYB_0422 - nitrogenase molybdenum-iron protein alpha chain 417 58.72 0 432348..433883 + 511 86607920 nifK CYB_0423 - nitrogenase molybdenum-iron protein beta chain 418 62.96 +1 434137..435324 + 395 86607921 aksA CYB_0424 - trans-homoaconitate synthase 419 56.00 0 435314..435463 + 49 86607922 - CYB_0425 - hypothetical protein 420 56.82 0 435460..435723 + 87 86607923 nifZ CYB_0426 - NifZ protein 421 53.73 -1 435720..435920 + 66 86607924 - CYB_0427 - NifT/FixU family protein 422 58.78 0 436073..437302 + 409 86607925 - CYB_0428 - major facilitator transporter 423 62.22 0 437528..439684 - 718 86607926 - CYB_0430 - TPR repeat-containing protein 424 60.54 0 439914..442607 + 897 86607927 - CYB_0431 - putative phycobilisome 120 kDa linker polypeptide, core 425 59.98 0 442670..443806 - 378 86607928 ruvB CYB_0432 - Holliday junction DNA helicase B 426 58.03 0 443947..445011 - 354 86607929 psbA-3 CYB_0433 - photosystem II protein D1 427 63.56 +1 445110..445817 + 235 86607930 - CYB_0434 - glycoprotease family protein 428 54.48 0 445854..446411 + 185 86607931 efp CYB_0435 - elongation factor P 429 57.59 0 446481..446954 + 157 86607932 accB CYB_0436 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 430 60.75 0 447349..448278 + 309 86607933 - CYB_0437 - Ser/Thr protein phosphatase family protein 431 59.04 0 448355..449101 + 248 86607934 cysH CYB_0438 - phosophoadenylyl-sulfate reductase 432 56.19 0 449105..449419 + 104 86607935 - CYB_0439 - antibiotic biosynthesis monooxygenase domain-containing protein 433 54.88 0 449717..450658 - 313 86607936 - CYB_0441 - phosphoribulokinase 434 56.64 0 450944..451711 + 255 86607937 - CYB_0442 - pspA/IM30 family protein 435 58.49 0 451961..452425 + 154 86607938 - CYB_0443 - pentapeptide repeat-containing protein 436 62.80 +1 452438..453265 - 275 86607939 cysQ CYB_0444 - 3'(2'),5'-bisphosphate nucleotidase 437 64.57 +1 453281..454042 - 253 86607940 hisF CYB_0445 - imidazole glycerol phosphate synthase subunit HisF 438 63.59 +1 454104..455207 - 367 86607941 - CYB_0446 - hypothetical protein 439 60.14 0 455204..455479 - 91 86607942 - CYB_0447 - hypothetical protein 440 57.08 0 455532..456011 - 159 86607943 rpsP CYB_0448 - ribosomal protein S16 441 57.05 0 456261..456707 + 148 86607944 - CYB_0449 - hypothetical protein 442 61.11 0 456830..457225 - 131 86607945 - CYB_0450 - hypothetical protein 443 59.19 0 457349..458311 + 320 86607946 sds CYB_0451 - solanesyl diphosphate synthase 444 57.46 0 458340..459143 - 267 86607947 lepB CYB_0452 - signal peptidase I 445 55.18 0 459188..459544 + 118 86607948 - CYB_0453 - hypothetical protein 446 58.45 0 459576..460622 - 348 86607949 - CYB_0454 - general secretory pathway protein, putative 447 62.22 0 460791..461510 + 239 86607950 pdxJ CYB_0455 - pyridoxal phosphate biosynthetic protein PdxJ 448 61.30 0 461525..462157 + 210 86607951 - CYB_0456 - hypothetical protein 449 61.63 0 462170..463003 + 277 86607952 - CYB_0457 - biotin--acetyl-CoA-carboxylase ligase 450 62.32 0 463030..463950 + 306 86607953 - CYB_0458 - M23B family peptidase 451 64.20 +1 464348..465361 - 337 86607954 - CYB_0460 - heptosyltransferase family protein 452 64.08 +1 465556..466713 + 385 86607955 - CYB_0461 - DegT/DnrJ/EryC1/StrS aminotransferase family protein 453 56.92 0 466819..468018 + 399 86607956 - CYB_0462 - hypothetical protein 454 51.77 -1 468123..469082 - 319 86607957 - CYB_0463 - patatin family phospholipase 455 59.78 0 469147..469785 - 212 86607958 - CYB_0464 - phosphoglycerate mutase family protein 456 60.37 0 469831..470799 - 322 86607959 ppnK CYB_0465 - inorganic polyphosphate/ATP-NAD kinase 457 59.88 0 471169..473409 + 746 86607960 - CYB_0466 - protein kinase 458 57.26 0 473993..474109 - 38 86607961 - CYB_0467 - hypothetical protein 459 49.95 -2 474361..476334 - 657 86607962 - CYB_0468 - TPR domain-containing protein 460 52.08 -1 476536..478557 - 673 86607963 - CYB_0469 - FkbM family methyltransferase 461 54.01 -1 478587..480641 - 684 86607964 - CYB_0470 - FkbM family methyltransferase 462 59.03 0 480813..480956 + 47 86607965 - CYB_0471 - hypothetical protein 463 56.85 0 481589..482800 + 403 86607966 - CYB_0472 - ISSoc1, transposase 464 50.44 -1 482827..483726 + 299 86607967 - CYB_0473 - 2OG-Fe(II) oxygenase family oxidoreductase 465 46.19 -2 483699..484709 + 336 86607968 - CYB_0474 - hypothetical protein 466 52.33 -1 484805..485320 - 171 86607969 - CYB_0475 - general secretion pathway protein G, putative 467 48.27 -2 485683..489318 + 1211 86607970 - CYB_0476 - FkbM family methyltransferase 468 48.15 -2 489323..489457 + 44 86607971 - CYB_0477 - hypothetical protein 469 57.23 0 489533..490051 - 172 86607972 - CYB_0478 - purine phosphoribosyltransferase, putative 470 57.65 0 490117..491037 - 306 86607973 ilvE CYB_0479 - branched-chain amino acid aminotransferase 471 50.19 -2 491706..491966 + 86 86607974 - CYB_0480 - peptidase propeptide/YPEB domain-containing protein 472 58.42 0 492232..493674 + 480 86607975 - CYB_0481 - HlyC/CorC (HCC) family transporter 473 59.92 0 493690..495231 - 513 86607976 - CYB_0482 - Orn/Lys/Arg decarboxylase 474 57.50 0 495354..495920 + 188 86607977 - CYB_0483 - hypothetical protein 475 55.33 0 496114..498204 - 696 86607978 - CYB_0484 - type IV pilus secretin PilQ, putative 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0