version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 313 59.11 0 332661..333467 + 268 86607816 minD CYB_0317 - septum site-determining protein MinD 314 57.10 0 333559..333861 + 100 86607817 minE CYB_0318 - cell division topological specificity factor MinE 315 60.13 0 334259..336613 + 784 86607818 - CYB_0320 - monovalent cation:proton antiporter-2 (CPA2) family protein 316 58.54 0 336591..336959 - 122 86607819 - CYB_0319 - hypothetical protein 317 62.69 +1 337002..337604 - 200 86607820 - CYB_0321 - hypothetical protein 318 57.44 0 337816..339744 - 642 86607821 gyrB CYB_0322 - DNA gyrase subunit B 319 62.22 0 339946..340485 - 179 86607822 rimM CYB_0323 - 16S rRNA-processing protein 320 57.87 0 340498..341463 - 321 86607823 - CYB_0324 - HflC/HflK family protein 321 54.25 -1 341670..342692 + 340 86607824 - CYB_0325 - FAD-dependent oxidoreductase 322 54.22 -1 342764..343864 + 366 86607825 - CYB_0326 - polysaccharide deacetylase family protein 323 61.68 0 344054..345457 + 467 86607826 leuC CYB_0327 - isopropylmalate isomerase large subunit 324 55.19 0 345731..346924 - 397 86607827 - CYB_0329 - ISSoc1, transposase 325 64.81 +1 346995..347858 - 287 86607828 - CYB_0330 - xanthine dehydrogenase accessory factor, putative 326 62.76 +1 347947..349098 - 383 86607829 - CYB_0331 - carboxylesterase 327 61.59 0 349223..350188 + 321 86607830 - CYB_0332 - LysR family transcriptional regulator 328 61.58 0 350302..351342 + 346 86607831 - CYB_0333 - hypothetical protein 329 61.83 0 351715..352995 - 426 86607832 - CYB_0334 - Rho termination factor domain-containing protein 330 61.83 0 353347..354255 + 302 86607833 - CYB_0335 - hypothetical protein 331 61.23 0 354383..355504 + 373 86607834 - CYB_0336 - heptosyltransferase family protein 332 61.29 0 355765..356694 + 309 86607835 - CYB_0337 - integral membrane protein 333 64.10 +1 356719..357846 - 375 86607836 - CYB_0338 - alcohol dehydrogenase, iron-containing 334 61.63 0 358767..360056 - 429 86607837 - CYB_0340 - aminotransferase, classes I and II 335 60.72 0 360079..361053 - 324 86607838 - CYB_0341 - hypothetical protein 336 60.27 0 361401..362072 - 223 86607839 - CYB_0342 - hypothetical protein 337 61.72 0 362120..362827 - 235 86607840 pyrF CYB_0343 - orotidine 5'-phosphate decarboxylase 338 56.28 0 362824..363420 - 198 86607841 - CYB_0344 - hypothetical protein 339 62.30 0 364017..364817 - 266 86607842 - CYB_0345 - hypothetical protein 340 56.71 0 364814..365245 - 143 86607843 - CYB_0346 - hypothetical protein 341 59.41 0 365638..366588 + 316 86607844 - CYB_0347 - GGDEF/FHA domain-containing protein 342 55.13 0 366610..366999 - 129 86607845 gcvH CYB_0348 - glycine cleavage system protein H 343 58.39 0 367081..367986 - 301 86607846 - CYB_0349 - alpha/beta fold family hydrolase 344 63.19 +1 368129..369076 + 315 86607847 - CYB_0350 - NAD-dependent glycerol-3-phosphate dehydrogenase family protein 345 45.37 -2 369161..369268 - 35 86607848 - CYB_0351 - hypothetical protein 346 55.46 0 369353..369718 + 121 86607849 - CYB_0352 - response regulator 347 62.04 0 369859..371220 + 453 86607850 - CYB_0353 - ISSoc9, transposase 348 60.11 0 371273..371455 - 60 86607851 - CYB_0354 - hypothetical protein 349 55.07 0 371550..371756 + 68 86607852 - CYB_0355 - hypothetical protein 350 52.19 -1 371797..372024 + 75 86607853 - CYB_0356 - hypothetical protein 351 59.26 0 372178..373257 - 359 86607854 fba CYB_0357 - fructose-1,6-bisphosphate aldolase 352 61.95 0 373633..374226 + 197 86607855 - CYB_0358 - hypothetical protein 353 61.57 0 374262..375125 - 287 86607856 murI CYB_0359 - glutamate racemase 354 62.62 +1 375308..377185 - 625 86607857 - CYB_0360 - N-acetylmuramoyl-L-alanine amidase 355 54.51 0 377266..378450 + 394 86607858 - CYB_0361 - hypothetical protein 356 59.41 0 378804..379409 + 201 86607859 cbiT CYB_0362 - precorrin-6B methylase 357 57.08 0 379607..379825 + 72 86607860 - CYB_0363 - hypothetical protein 358 55.60 0 380443..381219 - 258 86607861 ubiE CYB_0364 - ubiquinone/menaquinone biosynthesis methyltransferase 359 65.62 +1 381323..381418 + 31 86607862 - CYB_0365 - hypothetical protein 360 69.01 +2 381676..381846 + 56 86607863 - CYB_0366 - hypothetical protein 361 61.29 0 382541..383098 + 185 86607864 cobU CYB_0367 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 362 56.25 0 383136..383615 + 159 86607865 - CYB_0368 - hypothetical protein 363 61.14 0 383612..384154 + 180 86607866 - CYB_0370 - hypothetical protein 364 57.68 0 383936..384202 - 88 86607867 - CYB_0369 - hypothetical protein 365 58.22 0 384573..385637 - 354 86607868 psbA-2 CYB_0371 - photosystem II protein D1 366 60.38 0 385745..388288 - 847 86607869 - CYB_0372 - hypothetical protein 367 61.12 0 388293..389735 - 480 86607870 - CYB_0373 - hypothetical protein 368 60.35 0 389844..390128 - 94 86607871 - CYB_0374 - hypothetical protein 369 64.87 +1 390215..390883 + 222 86607872 - CYB_0375 - molybdopterin-guanine dinucleotide biosynthesis protein A 370 60.99 0 390961..393057 + 698 86607873 - CYB_0376 - hypothetical protein 371 58.11 0 393663..394001 + 112 86607874 - CYB_0377 - hypothetical protein 372 57.02 0 394086..394427 + 113 86607875 - CYB_0378 - histidine triad family protein 373 57.91 0 394512..395162 + 216 86607876 cobH-2 CYB_0379 - precorrin-8X methylmutase 374 58.17 0 395663..396133 + 156 86607877 - CYB_0380 - hypothetical protein 375 60.95 0 396252..398000 - 582 86607878 - CYB_0381 - putative diflavin flavoprotein 376 63.10 +1 398116..399882 - 588 86607879 - CYB_0382 - GTP-binding protein 377 53.54 -1 399966..400064 + 32 86607880 - CYB_0383 - hypothetical protein 378 52.94 -1 400143..400295 - 50 86607881 - CYB_0384 - hypothetical protein 379 43.29 -2 400347..400778 - 143 86607882 - CYB_0385 - hypothetical protein 380 47.73 -2 400775..401392 - 205 86607883 - CYB_0386 - hypothetical protein 381 51.32 -1 401389..402072 - 227 86607884 - CYB_0387 - hypothetical protein 382 58.20 0 402139..403095 - 318 86607885 - CYB_0388 - carbohydrate ABC transporter permease 383 61.71 0 403102..404151 - 349 86607886 - CYB_0389 - carbohydrate ABC transporter permease 384 61.55 0 404141..405703 - 520 86607887 - CYB_0390 - carbohydrate ABC transporter ATP-binding protein 385 57.53 0 405675..406703 - 342 86607888 - CYB_0391 - Bmp family membrane protein 386 63.14 +1 407105..408379 + 424 86607889 codA CYB_0393 - cytosine deaminase 387 59.91 0 408376..408834 - 152 86607890 - CYB_0392 - hypothetical protein 388 61.24 0 408866..409492 - 208 86607891 - CYB_0394 - 5-formyltetrahydrofolate cyclo-ligase family protein 389 61.08 0 409537..410001 - 154 86607892 - CYB_0395 - peptidyl-prolyl cis-trans isomerase, FKBP-type 390 57.71 0 410061..410741 - 226 86607893 - CYB_0396 - hypothetical protein 391 65.45 +1 410818..412713 + 631 86607894 cbiG/cobJ CYB_0397 - cbiG protein/precorrin-3B C17-methyltransferase 392 62.14 0 412730..414517 - 595 86607895 modB CYB_0398 - molybdate ABC transporter, permease protein 393 57.68 0 414555..415322 - 255 86607896 modA CYB_0399 - molybdate ABC transporter, periplasmic molybdate-binding protein 394 46.85 -2 415426..415536 - 36 86607897 - CYB_0400 - hypothetical protein 395 45.24 -2 415575..415784 + 69 86607898 - CYB_0401 - molybdenum-pterin binding domain-containing protein 396 55.29 0 415813..417465 - 550 86607899 - CYB_0402 - transcriptional regulator PatB 397 52.33 -1 417808..418065 - 85 86607900 - CYB_0403 - hypothetical protein 398 49.47 -2 418165..418542 - 125 86607901 - CYB_0404 - FeoA domain-containing protein 399 49.00 -2 418571..418870 - 99 86607902 - CYB_0405 - ferredoxin, 2Fe-2S 400 55.46 0 418913..419278 - 121 86607903 nifW CYB_0406 - nitrogenase stabilizing/protective protein nifW 401 56.82 0 419275..419538 - 87 86607904 - CYB_0407 - hypothetical protein 402 59.65 0 419605..420060 - 151 86607905 - CYB_0408 - hypothetical protein 403 60.24 0 420063..420482 - 139 86607906 nifX CYB_0409 - nitrogenase cofactor biosynthesis protein NifX 404 64.05 +1 420564..421901 - 445 86607907 nifN CYB_0410 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 405 61.65 0 421901..423295 - 464 86607908 nifE CYB_0411 - nitrogenase MoFe cofactor biosynthesis protein NifE 406 59.17 0 423286..423645 - 119 86607909 - CYB_0412 - putative molybdenum-dependent nitrogenase 407 53.33 -1 423649..423873 - 74 86607910 - CYB_0413 - hypothetical protein 408 58.97 0 423916..424461 - 181 86607911 dpsA CYB_0414 - nutrient-stress induced DNA binding protein 409 61.21 0 424516..424845 - 109 86607912 - CYB_0415 - hypothetical protein 410 56.91 0 425332..425454 - 40 86607913 - CYB_0416 - hypothetical protein 411 61.66 0 425583..427019 + 478 86607914 nifB CYB_0417 - nitrogenase cofactor biosynthesis protein NifB 412 57.14 0 427045..427338 + 97 86607915 - CYB_0418 - ferredoxin, 4Fe-4S 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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