version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2657 58.04 0 2827533..2828633 + 366 86610159 - CYB_2734 - RNA polymerase sigma factor SigC 2658 62.36 0 2828630..2830276 - 548 86610160 mviN CYB_2733 - integral membrane protein MviN 2659 54.88 0 2830276..2831565 - 429 86610161 - CYB_2735 - ISSoc1, transposase 2660 61.73 0 2831818..2832648 - 276 86610162 cpcE-2 CYB_2736 - phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit 2661 60.02 0 2832682..2833539 - 285 86610163 cpcC CYB_2737 - phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2662 58.00 0 2833868..2834017 + 49 86610164 - CYB_2739 - hypothetical protein 2663 61.49 0 2834010..2834492 - 160 86610165 cpcA-2 CYB_2738 - phycocyanin, alpha subunit 2664 57.42 0 2834686..2835204 - 172 86610166 cpcB-2 CYB_2740 - phycocyanin, beta subunit 2665 60.67 0 2835853..2836452 + 199 86610167 cpeT CYB_2741 - CpeT protein 2666 59.77 0 2836654..2837769 + 371 86610168 - CYB_2743 - hypothetical protein 2667 56.02 0 2837761..2837976 - 71 86610169 - CYB_2742 - hypothetical protein 2668 45.29 -2 2838369..2840609 + 746 86610170 - CYB_2744 - piwi domain-containing protein 2669 58.46 0 2840674..2840868 + 64 86610171 - CYB_2745 - hypothetical protein 2670 61.97 0 2840998..2842233 + 411 86610172 - CYB_2746 - hypothetical protein 2671 60.44 0 2842241..2842738 + 165 86610173 - CYB_2747 - NUDIX family hydrolase 2672 58.31 0 2843127..2844371 + 414 86610174 - CYB_2748 - response regulator 2673 53.07 -1 2844419..2844793 + 124 86610175 - CYB_2749 - response regulator 2674 56.28 0 2844901..2845449 + 182 86610176 - CYB_2750 - CheW domain-containing protein 2675 59.87 0 2845498..2847735 + 745 86610177 - CYB_2751 - putative methyl-accepting chemotaxis protein 2676 61.98 0 2847737..2850508 + 923 86610178 - CYB_2752 - sensor histidine kinase/response regulator 2677 60.25 0 2850512..2850994 + 160 86610179 - CYB_2754 - hypothetical protein 2678 61.45 0 2850970..2851659 - 229 86610180 - CYB_2753 - hypothetical protein 2679 61.04 0 2851658..2852635 + 325 86610181 accA CYB_2755 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2680 62.22 0 2852931..2854706 - 591 86610182 - CYB_2756 - phospholipase D/competence protein ComEA 2681 61.78 0 2854866..2855417 + 183 86610183 - CYB_2757 - fasciclin domain-containing protein 2682 60.56 0 2855485..2855664 + 59 86610184 - CYB_2758 - hypothetical protein 2683 60.96 0 2855903..2857357 + 484 86610185 - CYB_2759 - GTP-binding domain-containing protein 2684 62.93 +1 2857718..2858011 + 97 86610186 - CYB_2761 - hypothetical protein 2685 59.48 0 2858008..2859468 - 486 86610187 - CYB_2760 - putative bacteriochlorophyll delivery (BCD) family protein 2686 59.15 0 2859638..2860702 + 354 86610188 - CYB_2762 - hypothetical protein 2687 58.82 0 2861094..2861297 + 67 86610189 - CYB_2763 - hypothetical protein 2688 60.53 0 2861533..2862999 + 488 86610190 - CYB_2764 - hypothetical protein 2689 56.56 0 2863171..2865693 + 840 86610191 - CYB_2765 - endonuclease/exonuclease/phosphatase family protein 2690 57.25 0 2865694..2865831 + 45 86610192 - CYB_2766 - hypothetical protein 2691 61.97 0 2865971..2867077 - 368 86610193 cbiD CYB_2767 - cobalt-precorrin-6A synthase 2692 57.63 0 2867277..2867630 + 117 86610194 - CYB_2768 - hypothetical protein 2693 59.39 0 2867669..2868259 - 196 86610195 def CYB_2769 - peptide deformylase 2694 53.65 -1 2868402..2868716 - 104 86610196 - CYB_2770 - hypothetical protein 2695 60.86 0 2868720..2869046 - 108 86610197 - CYB_2771 - hypothetical protein 2696 52.43 -1 2869046..2869312 - 88 86610198 - CYB_2772 - phycobilisome degradation protein nblA, putative 2697 58.33 0 2869342..2869437 + 31 86610199 - CYB_2773 - hypothetical protein 2698 54.37 -1 2869600..2869851 + 83 86610200 - CYB_2774 - putative RNA-binding protein 2699 59.16 0 2869975..2871279 + 434 86610201 sbcD CYB_2775 - nuclease SbcCD, D subunit 2700 50.41 -1 2871799..2872044 + 81 86610202 - CYB_2776 - hypothetical protein 2701 57.50 0 2872503..2872742 + 79 86610203 - CYB_2778 - hypothetical protein 2702 61.00 0 2872847..2874769 - 640 86610204 speA CYB_2779 - arginine decarboxylase 2703 62.31 0 2875217..2876317 + 366 86610205 pstS-3 CYB_2780 - phosphate ABC transporter, periplasmic phosphate-binding protein 2704 61.60 0 2876608..2878500 + 630 86610206 dnaK-1 CYB_2781 - molecular chaperone DnaK 2705 57.08 0 2878709..2879668 + 319 86610207 - CYB_2782 - DnaJ family protein 2706 61.25 0 2879809..2880639 - 276 86610208 - CYB_2783 - RNA methyltransferase 2707 61.05 0 2880707..2881294 + 195 86610209 - CYB_2784 - putative lipoprotein 2708 61.99 0 2881309..2882163 + 284 86610210 lpxC CYB_2785 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2709 59.88 0 2882377..2882877 + 166 86610211 fabZ CYB_2786 - (3R)-hydroxymyristoyl-ACP dehydratase 2710 59.88 0 2883111..2884097 + 328 86610212 lpxA CYB_2787 - UDP-N-acetylglucosamine acyltransferase 2711 63.36 +1 2884124..2885332 + 402 86610213 lpxB CYB_2789 - lipid-A-disaccharide synthase 2712 56.48 0 2885329..2886801 - 490 86610214 - CYB_2788 - hypothetical protein 2713 58.80 0 2887174..2888088 + 304 86610215 - CYB_2791 - sensor histidine kinase 2714 58.33 0 2888078..2888569 - 163 86610216 - CYB_2790 - hypothetical protein 2715 48.44 -2 2889313..2889729 + 138 86610217 - CYB_2792 - hypothetical protein 2716 57.36 0 2889963..2890220 + 85 86610218 - CYB_2793 - hypothetical protein 2717 60.42 0 2890402..2892402 - 666 162139626 tynA CYB_2794 - tyramine oxidase 2718 56.78 0 2893312..2895972 + 886 86610220 - CYB_2795 - sensory box histidine kinase 2719 57.12 0 2896427..2896981 + 184 86610221 - CYB_2797 - hypothetical protein 2720 54.55 0 2897084..2897413 - 109 86610222 rpsT CYB_2798 - 30S ribosomal protein S20 2721 61.03 0 2897501..2898865 + 454 86610223 - CYB_2800 - FG-GAP repeat- ASPIC/UnbV domain-containing protein 2722 59.30 0 2898862..2899839 - 325 86610224 moaA CYB_2799 - molybdenum cofactor biosynthesis protein MoaA 2723 60.69 0 2900036..2901943 - 635 86610225 - CYB_2801 - monovalent cation:proton antiporter-2 (CPA2) family protein 2724 59.16 0 2902368..2902820 + 150 86610226 - CYB_2802 - hypothetical protein 2725 57.45 0 2902854..2902994 - 46 86610227 - CYB_2803 - hypothetical protein 2726 57.40 0 2903069..2904493 - 474 86610228 glnA-2 CYB_2804 - glutamine synthetase, type I 2727 56.79 0 2904742..2904903 + 53 86610229 - CYB_2805 - hypothetical protein 2728 58.98 0 2904959..2906389 + 476 86610230 trxB CYB_2806 - thioredoxin-disulfide reductase 2729 63.72 +1 2906476..2908782 - 768 86610231 purL CYB_2807 - phosphoribosylformylglycinamidine synthase II 2730 62.25 0 2908804..2911317 - 837 86610232 recG CYB_2808 - ATP-dependent DNA helicase RecG 2731 59.14 0 2911524..2911616 - 30 86610233 psaM CYB_2809 - photosystem I reaction center subunit XII 2732 61.29 0 2912030..2913313 + 427 86610234 glyA CYB_2810 - serine hydroxymethyltransferase 2733 61.40 0 2913347..2914447 + 366 86610235 - CYB_2811 - glycosyl transferase, group 4 family protein 2734 60.09 0 2914444..2915112 + 222 86610236 - CYB_2812 - hypothetical protein 2735 61.93 0 2915118..2915645 - 175 86610237 apt CYB_2813 - adenine phosphoribosyltransferase 2736 58.68 0 2915856..2916293 + 145 86610238 - CYB_2814 - hypothetical protein 2737 63.59 +1 2916339..2918288 - 649 86610239 - CYB_2815 - NHL repeat-containing protein 2738 61.62 0 2918611..2919879 - 422 86610240 - CYB_2816 - hypothetical protein 2739 64.25 +1 2920310..2920888 - 192 86610241 - CYB_2817 - DNA-3-methyladenine glycosylase 2740 57.61 0 2920915..2921190 - 91 86610242 - CYB_2818 - MoaD family protein 2741 62.84 +1 2921227..2921748 - 173 86610243 - CYB_2819 - fasciclin domain-containing protein 2742 61.00 0 2921853..2923193 - 446 86610244 thrC-2 CYB_2820 - threonine synthase 2743 58.33 0 2923342..2923497 + 51 86610245 - CYB_2821 - hypothetical protein 2744 62.63 +1 2923704..2925635 + 643 86610246 gidA CYB_2823 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2745 65.48 +1 2925599..2926693 - 364 86610247 gcp CYB_2822 - O-sialoglycoprotein endopeptidase 2746 58.06 0 2926899..2927444 + 181 86610248 psaF CYB_2824 - photosystem I reaction center subunit III 2747 45.83 -2 2927489..2927608 + 39 86610249 psaJ CYB_2825 - photosystem I reaction center subunit IX 2748 58.54 0 2927710..2928189 + 159 86610250 psaL-2 CYB_2826 - photosystem I reaction center protein subunit XI 2749 52.08 -1 2928199..2928438 + 79 86610251 - CYB_2827 - hypothetical protein 2750 61.34 0 2928604..2929035 + 143 86610252 - CYB_2828 - hypothetical protein 2751 58.66 0 2929069..2930205 + 378 86610253 - CYB_2829 - RNA methyltransferase 2752 58.14 0 2930228..2930485 + 85 86610254 - CYB_2830 - hypothetical protein 2753 56.60 0 2930485..2930802 + 105 86610255 - CYB_2831 - ferredoxin, 2Fe-2S 2754 59.90 0 2931331..2931537 + 68 86610256 - CYB_2832 - hypothetical protein 2755 63.09 +1 2931711..2932577 + 288 86610257 thiD CYB_2833 - phosphomethylpyrimidine kinase 2756 56.97 0 2932604..2933170 + 188 86610258 - CYB_2834 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0