version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2531 61.60 0 2702764..2703138 + 124 86610033 rplV CYB_2602 - 50S ribosomal protein L22 2532 60.57 0 2703181..2703951 + 256 86610034 rpsC CYB_2603 - 30S ribosomal protein S3 2533 59.83 0 2704007..2704474 + 155 86610035 rplP CYB_2604 - 50S ribosomal protein L16 2534 56.31 0 2704488..2704709 + 73 86610036 rpmC CYB_2605 - 50S ribosomal protein L29 2535 51.59 -1 2704709..2704960 + 83 86610037 rpsQ CYB_2606 - 30S ribosomal protein S17 2536 56.91 0 2704957..2705325 + 122 86610038 rplN CYB_2607 - 50S ribosomal protein L14 2537 55.14 0 2705325..2705723 + 132 86610039 rplX CYB_2608 - ribosomal protein L24 2538 55.80 0 2705792..2706334 + 180 86610040 rplE CYB_2609 - 50S ribosomal protein L5 2539 59.61 0 2706381..2706791 + 136 86610041 rpsH CYB_2610 - 30S ribosomal protein S8 2540 58.06 0 2706825..2707370 + 181 86610042 rplF CYB_2611 - 50S ribosomal protein L6 2541 58.81 0 2707402..2707770 + 122 86610043 rplR CYB_2612 - 50S ribosomal protein L18 2542 60.89 0 2707789..2708325 + 178 86610044 rpsE CYB_2613 - 30S ribosomal protein S5 2543 63.36 +1 2708363..2708815 + 150 86610045 rplO CYB_2614 - 50S ribosomal protein L15 2544 56.51 0 2708968..2710266 + 432 86610046 secY CYB_2615 - preprotein translocase subunit SecY 2545 61.17 0 2710266..2710847 + 193 86610047 adk CYB_2616 - adenylate kinase 2546 59.56 0 2710886..2711659 + 257 86610048 map-2 CYB_2617 - methionine aminopeptidase 2547 52.89 -1 2711790..2712014 + 74 86610049 infA CYB_2618 - translation initiation factor IF-1 2548 57.53 0 2712092..2712682 + 196 86610050 - CYB_2619 - hypothetical protein 2549 60.52 0 2712989..2713297 + 102 86610051 - CYB_2620 - hypothetical protein 2550 58.90 0 2713442..2714329 - 295 86610052 - CYB_2621 - PRC-barrel domain-containing protein 2551 61.75 0 2714417..2715556 - 379 86610053 - CYB_2622 - glycosyl transferase, group 1 family protein 2552 57.40 0 2715650..2716102 - 150 86610054 - CYB_2623 - Rieske family iron-sulfur cluster-binding protein 2553 51.58 -1 2716343..2716912 - 189 86610055 - CYB_2624 - hypothetical protein 2554 60.68 0 2717150..2719069 - 639 86610056 - CYB_2625 - R3H domain-containing protein 2555 59.46 0 2719085..2720125 - 346 86610057 - CYB_2626 - iron-sulfur cluster-binding protein 2556 57.88 0 2720214..2720657 - 147 86610058 - CYB_2627 - hypothetical protein 2557 59.33 0 2720921..2721424 + 167 86610059 msrB CYB_2628 - methionine-R-sulfoxide reductase 2558 59.83 0 2721474..2722277 + 267 86610060 - CYB_2629 - iron permease 2559 59.15 0 2722676..2722888 - 70 86610061 - CYB_2630 - CP12 domain-containing protein 2560 60.79 0 2723146..2723826 - 226 86610062 - CYB_2631 - ABC transporter, ATP-binding protein 2561 56.67 0 2723863..2724132 - 89 86610063 - CYB_2632 - hypothetical protein 2562 60.35 0 2724284..2724742 - 152 86610064 - CYB_2633 - MAPEG family protein 2563 59.13 0 2724877..2725314 - 145 86610065 - CYB_2634 - hypothetical protein 2564 62.14 0 2725444..2727342 + 632 86610066 glmU CYB_2635 - UDP-N-acetylglucosamine pyrophosphorylase 2565 44.97 -2 2728451..2728828 + 125 86610067 - CYB_2638 - ISSoc13, transposase orfA 2566 42.89 -2 2728786..2729193 + 135 86610068 - CYB_2639 - ISSoc13, transposase orfB 2567 59.42 0 2729688..2730170 + 160 86610069 - CYB_2641 - pentapeptide repeat-containing protein 2568 59.42 0 2730222..2730497 + 91 86610070 - CYB_2642 - hypothetical protein 2569 57.70 0 2730695..2731954 + 419 86610071 ispH CYB_2643 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2570 62.25 0 2731981..2732931 + 316 86610072 - CYB_2645 - auxin efflux carrier (AEC) family protein 2571 56.92 0 2732928..2733122 - 64 86610073 - CYB_2644 - hypothetical protein 2572 61.07 0 2733293..2734828 - 511 86610074 - CYB_2646 - hypothetical protein 2573 59.96 0 2734923..2735891 + 322 86610075 - CYB_2647 - aminomethyltransferase, putative 2574 52.16 -1 2735956..2736210 - 84 86610076 - CYB_2648 - HNH endonuclease domain-containing protein 2575 51.09 -1 2737442..2737852 - 136 86610077 - CYB_2649 - hypothetical protein 2576 48.01 -2 2737900..2740434 - 844 86610078 - CYB_2650 - hypothetical protein 2577 57.49 0 2740771..2741424 - 217 86610079 - CYB_2652 - Crp/FNR family transcriptional regulator 2578 52.27 -1 2741541..2741672 - 43 86610080 - CYB_2653 - hypothetical protein 2579 56.19 0 2741719..2743389 - 556 86610081 - CYB_2654 - hypothetical protein 2580 57.54 0 2743390..2743959 - 189 86610082 - CYB_2655 - hypothetical protein 2581 62.48 0 2743993..2744994 - 333 86610083 - CYB_2656 - zinc-binding dehydrogenase family oxidoreductase 2582 55.32 0 2745262..2746416 - 384 86610084 - CYB_2657 - ISSoc8, transposase 2583 55.30 0 2746711..2747625 - 304 86610085 - CYB_2658 - hypothetical protein 2584 64.24 +1 2747957..2749357 - 466 86610086 - CYB_2659 - amidase 2585 56.61 0 2749354..2749542 - 62 86610087 - CYB_2660 - hypothetical protein 2586 58.93 0 2749614..2750246 - 210 86610088 - CYB_2661 - hypothetical protein 2587 44.71 -2 2750457..2750834 + 125 86610089 - CYB_2662 - ISSoc13, transposase orfA 2588 42.89 -2 2750792..2751199 + 135 86610090 - CYB_2663 - ISSoc13, transposase orfB 2589 60.67 0 2751214..2752080 - 288 86610091 - CYB_2664 - hypothetical protein 2590 59.89 0 2752205..2753149 + 314 86610092 accD CYB_2665 - acetyl-CoA carboxylase subunit beta 2591 53.87 -1 2753410..2753784 + 124 86610093 - CYB_2666 - anti-anti-sigma factor 2592 60.14 0 2753886..2754590 + 234 86610094 - CYB_2667 - hypothetical protein 2593 59.68 0 2754666..2756882 - 738 86610095 - CYB_2668 - TrkA domain-containing protein 2594 57.88 0 2757304..2758350 + 348 86610096 - CYB_2669 - iron ABC transporter periplasmic-binding protein 2595 48.45 -2 2758341..2758889 + 182 86610097 - CYB_2670 - hypothetical protein 2596 61.73 0 2758983..2760683 + 566 86610098 - CYB_2671 - iron ABC transporter permease 2597 61.27 0 2760689..2761633 - 314 86610099 atpG CYB_2672 - F0F1 ATP synthase subunit gamma 2598 59.30 0 2761695..2763215 - 506 86610100 atpA CYB_2673 - F0F1 ATP synthase subunit alpha 2599 58.47 0 2763260..2763808 - 182 86610101 atpH CYB_2674 - F0F1 ATP synthase subunit delta 2600 60.28 0 2763829..2764392 - 187 86610102 atpF CYB_2675 - F0F1 ATP synthase subunit B 2601 58.02 0 2764428..2764901 - 157 86610103 - CYB_2676 - F0F1 ATP synthase subunit B' 2602 58.94 0 2764996..2765241 - 81 86610104 atpE CYB_2677 - F0F1 ATP synthase subunit C 2603 54.70 0 2765262..2765495 - 77 86610105 - CYB_2678 - hypothetical protein 2604 55.02 0 2765470..2766216 - 248 86610106 atpB CYB_2679 - F0F1 ATP synthase subunit A 2605 57.51 0 2766222..2766614 - 130 86610107 - CYB_2680 - ATP synthase protein I 2606 47.92 -2 2767252..2767347 - 31 86610108 - CYB_2681 - hypothetical protein 2607 60.20 0 2767423..2768010 + 195 86610109 - CYB_2682 - hypothetical protein 2608 63.17 +1 2768007..2768321 + 104 86610110 - CYB_2683 - hypothetical protein 2609 61.83 0 2768336..2769928 - 530 86610111 gpmI CYB_2684 - phosphoglyceromutase 2610 58.38 0 2770144..2770662 - 172 86610112 - CYB_2685 - TPR repeat-containing protein 2611 59.68 0 2770702..2771202 - 166 86610113 dps CYB_2686 - DNA starvation/stationary phase protection protein Dps 2612 63.91 +1 2771313..2772692 - 459 86610114 trmE CYB_2687 - tRNA modification GTPase TrmE 2613 59.52 0 2772843..2775443 + 866 86610115 glgP CYB_2688 - alpha-glucan phosphorylases 2614 60.08 0 2775856..2776917 + 353 86610116 - CYB_2690 - TPR repeat-containing protein 2615 59.14 0 2776914..2777723 - 269 86610117 - CYB_2689 - DNA-binding response regulator 2616 60.96 0 2777873..2779012 + 379 86610118 fni CYB_2691 - isopentenyl pyrophosphate isomerase 2617 57.91 0 2779284..2780882 - 532 86610119 - CYB_2692 - hypothetical protein 2618 58.91 0 2781228..2781923 - 231 86610120 - CYB_2694 - hypothetical protein 2619 61.39 0 2782184..2783338 - 384 86610121 - CYB_2695 - FAD-binding protein 2620 50.83 -1 2783382..2784644 - 420 86610122 - CYB_2696 - ISSoc12, transposase 2621 59.67 0 2785261..2786232 + 323 86610123 coxB CYB_2697 - cytochrome c oxidase, subunit II 2622 56.88 0 2786310..2788016 + 568 86610124 ctaD CYB_2698 - cytochrome c oxidase, subunit I 2623 55.23 0 2788135..2788746 + 203 86610125 ctaE CYB_2700 - cytochrome c oxidase, subunit III 2624 57.20 0 2788734..2789726 - 330 86610126 holA CYB_2699 - DNA polymerase III subunit delta 2625 55.93 0 2789872..2791026 - 384 86610127 - CYB_2701 - ISSoc8, transposase 2626 50.63 -1 2791341..2791577 + 78 86610128 - CYB_2702 - hypothetical protein 2627 59.89 0 2791954..2793369 + 471 86610129 - CYB_2703 - putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein 2628 52.80 -1 2793521..2793859 + 112 86610130 glnB CYB_2704 - nitrogen regulatory protein P-II 2629 57.61 0 2794011..2795423 + 470 86610131 amt CYB_2705 - ammonium transporter 2630 59.04 0 2795623..2796291 + 222 86610132 ispD CYB_2706 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0