version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2462 60.64 0 2632126..2633949 - 607 86609964 treZ CYB_2529 - malto-oligosyltrehalose trehalohydrolase 2463 60.47 0 2634102..2636165 + 687 86609965 - CYB_2532 - prolyl oligopeptidase 2464 60.20 0 2636162..2637445 - 427 86609966 eno CYB_2531 - phosphopyruvate hydratase 2465 55.41 0 2637684..2638358 - 224 86609967 ntcA CYB_2533 - nitrogen-responsive regulatory protein 2466 57.10 0 2638664..2640514 + 616 86609968 - CYB_2534 - M61 family peptidase 2467 43.96 -2 2640598..2641905 + 435 86609969 - CYB_2535 - hypothetical protein 2468 60.14 0 2641936..2642823 - 295 86609970 - CYB_2536 - hypothetical protein 2469 55.06 0 2643154..2643696 + 180 86609971 - CYB_2537 - cytochrome c-550 2470 58.84 0 2643696..2644193 + 165 86609972 - CYB_2539 - cytochrome c-550 2471 55.11 0 2644165..2645358 - 397 86609973 - CYB_2538 - ISSoc1, transposase 2472 59.07 0 2645493..2646242 - 249 86609974 ureF CYB_2540 - urease accessory protein UreF 2473 55.85 0 2646246..2646818 - 190 86609975 yfiA CYB_2541 - ribosomal subunit interface protein 2474 60.48 0 2647746..2648990 + 414 86609976 - CYB_2542 - aluminium resistance protein 2475 59.73 0 2649088..2649894 + 268 86609977 - CYB_2543 - pre-peptidase C-terminal domain-containing protein 2476 49.79 -2 2650188..2650430 + 80 86609978 - CYB_2544 - hypothetical protein 2477 61.01 0 2650458..2650775 + 105 86609979 - CYB_2546 - hypothetical protein 2478 55.64 0 2650772..2651170 - 132 86609980 hypA CYB_2545 - hydrogenase nickel insertion protein HypA 2479 61.00 0 2651825..2653042 - 405 86609981 argJ CYB_2548 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2480 57.39 0 2653239..2654057 + 272 86609982 - CYB_2549 - ABC transporter, ATP-binding protein 2481 57.14 0 2654319..2655116 + 265 86609983 - CYB_2550 - ABC transporter, permease protein 2482 61.41 0 2655375..2656382 - 335 86609984 - CYB_2551 - phosphate ABC transporter periplasmic substrate-binding protein 2483 61.28 0 2656486..2658546 - 686 86609985 - CYB_2552 - VacB/RNB family exoribonuclease 2484 55.24 0 2659064..2659702 + 212 86609986 - CYB_2553 - LuxR family DNA-binding response regulator 2485 51.52 -1 2659776..2659940 + 54 86609987 - CYB_2554 - hypothetical protein 2486 59.18 0 2660114..2660995 - 293 86609988 - CYB_2555 - LysR family transcriptional regulator 2487 54.19 -1 2661170..2661634 + 154 86609989 - CYB_2556 - hypothetical protein 2488 56.90 0 2661653..2662870 - 405 86609990 - CYB_2557 - ISSoc1, transposase 2489 60.49 0 2662984..2663679 + 231 86609991 deoC CYB_2558 - deoxyribose-phosphate aldolase 2490 60.72 0 2663676..2664533 + 285 86609992 recO CYB_2559 - DNA repair protein RecO 2491 60.73 0 2664997..2665737 + 246 86609993 - CYB_2561 - DNA-binding response regulator 2492 62.07 0 2665710..2667557 - 615 86609994 - CYB_2560 - TPR repeat-containing protein 2493 58.33 0 2667986..2668201 - 71 86609995 - CYB_2562 - hypothetical protein 2494 53.97 -1 2668439..2668690 + 83 86609996 - CYB_2563 - hypothetical protein 2495 60.74 0 2668806..2669480 - 224 86609997 - CYB_2564 - riboflavin biosynthesis protein RibD domain-containing protein 2496 61.87 0 2669587..2669982 + 131 86609998 - CYB_2565 - hypothetical protein 2497 60.48 0 2670285..2671964 + 559 86609999 - CYB_2566 - hypothetical protein 2498 57.84 0 2672142..2672447 + 101 86610000 clpS CYB_2568 - ATP-dependent Clp protease adaptor 2499 64.29 +1 2672396..2673532 - 378 86610001 - CYB_2567 - hypothetical protein 2500 51.54 -1 2673674..2673997 + 107 86610002 - CYB_2569 - hypothetical protein 2501 56.67 0 2674026..2674475 + 149 86610003 - CYB_2570 - FUR family transcriptional regulator 2502 61.48 0 2674475..2674975 + 166 86610004 - CYB_2571 - hypothetical protein 2503 59.59 0 2675267..2675803 + 178 86610005 - CYB_2573 - hypothetical protein 2504 62.68 +1 2675800..2676627 - 275 86610006 - CYB_2572 - DnaJ domain-containing protein 2505 54.83 0 2676757..2678328 - 523 86610007 - CYB_2574 - radical SAM domain-containing protein 2506 59.79 0 2678480..2679832 + 450 86610008 - CYB_2575 - serine/threonine protein kinase 2507 63.50 +1 2680579..2681337 + 252 86610009 - CYB_2576 - hypothetical protein 2508 57.36 0 2681523..2681855 - 110 86610010 cbbS CYB_2577 - ribulose bisphosphate carboxylase, small subunit 2509 57.35 0 2681864..2682271 - 135 86610011 rbcX CYB_2578 - chaperon-like protein RbcX 2510 59.16 0 2682338..2683762 - 474 86610012 rbcL CYB_2579 - ribulose bisophosphate carboxylase 2511 54.84 0 2684183..2684275 - 30 86610013 - CYB_2580 - hypothetical protein 2512 55.06 0 2684272..2684874 - 200 86610014 clpP-2 CYB_2581 - ATP-dependent Clp protease, proteolytic subunit ClpP 2513 54.05 -1 2685098..2685208 + 36 86610015 - CYB_2582 - hypothetical protein 2514 56.60 0 2685411..2685569 - 52 86610016 - CYB_2584 - hypothetical protein 2515 54.31 -1 2685648..2685995 - 115 86610017 - CYB_2585 - hypothetical protein 2516 58.89 0 2686481..2687728 + 415 86610018 - CYB_2587 - hypothetical protein 2517 63.27 +1 2687725..2689137 - 470 86610019 cobB CYB_2586 - cobyrinic acid a,c-diamide synthase 2518 60.16 0 2689154..2689921 - 255 86610020 cobO-2 CYB_2588 - cob(I)alamin adenosyltransferase 2519 58.27 0 2690054..2690422 + 122 86610021 - CYB_2589 - putative lipoprotein 2520 60.96 0 2690915..2692159 + 414 86610022 metK CYB_2590 - S-adenosylmethionine synthetase 2521 43.14 -2 2692188..2692595 - 135 86610023 - CYB_2591 - ISSoc13, transposase orfB 2522 44.71 -2 2692553..2692930 - 125 86610024 - CYB_2592 - ISSoc13, transposase orfA 2523 60.69 0 2693001..2693519 - 172 86610025 - CYB_2593 - molybdenum cofactor biosynthesis domain-containing protein 2524 61.93 0 2693556..2694083 - 175 86610026 - CYB_2594 - hypothetical protein 2525 60.95 0 2694268..2696505 - 745 86610027 - CYB_2595 - hypothetical protein 2526 62.48 0 2699499..2700143 + 214 86610028 rplC CYB_2597 - 50S ribosomal protein L3 2527 61.41 0 2700194..2701144 + 316 86610029 rplD CYB_2598 - ribosomal protein L4 2528 60.67 0 2701137..2701436 + 99 86610030 rplW CYB_2599 - 50S ribosomal protein L23 2529 63.50 +1 2701486..2702370 + 294 86610031 rplB CYB_2600 - 50S ribosomal protein L2 2530 56.38 0 2702437..2702718 + 93 86610032 rpsS CYB_2601 - ribosomal protein S19 2531 61.60 0 2702764..2703138 + 124 86610033 rplV CYB_2602 - 50S ribosomal protein L22 2532 60.57 0 2703181..2703951 + 256 86610034 rpsC CYB_2603 - 30S ribosomal protein S3 2533 59.83 0 2704007..2704474 + 155 86610035 rplP CYB_2604 - 50S ribosomal protein L16 2534 56.31 0 2704488..2704709 + 73 86610036 rpmC CYB_2605 - 50S ribosomal protein L29 2535 51.59 -1 2704709..2704960 + 83 86610037 rpsQ CYB_2606 - 30S ribosomal protein S17 2536 56.91 0 2704957..2705325 + 122 86610038 rplN CYB_2607 - 50S ribosomal protein L14 2537 55.14 0 2705325..2705723 + 132 86610039 rplX CYB_2608 - ribosomal protein L24 2538 55.80 0 2705792..2706334 + 180 86610040 rplE CYB_2609 - 50S ribosomal protein L5 2539 59.61 0 2706381..2706791 + 136 86610041 rpsH CYB_2610 - 30S ribosomal protein S8 2540 58.06 0 2706825..2707370 + 181 86610042 rplF CYB_2611 - 50S ribosomal protein L6 2541 58.81 0 2707402..2707770 + 122 86610043 rplR CYB_2612 - 50S ribosomal protein L18 2542 60.89 0 2707789..2708325 + 178 86610044 rpsE CYB_2613 - 30S ribosomal protein S5 2543 63.36 +1 2708363..2708815 + 150 86610045 rplO CYB_2614 - 50S ribosomal protein L15 2544 56.51 0 2708968..2710266 + 432 86610046 secY CYB_2615 - preprotein translocase subunit SecY 2545 61.17 0 2710266..2710847 + 193 86610047 adk CYB_2616 - adenylate kinase 2546 59.56 0 2710886..2711659 + 257 86610048 map-2 CYB_2617 - methionine aminopeptidase 2547 52.89 -1 2711790..2712014 + 74 86610049 infA CYB_2618 - translation initiation factor IF-1 2548 57.53 0 2712092..2712682 + 196 86610050 - CYB_2619 - hypothetical protein 2549 60.52 0 2712989..2713297 + 102 86610051 - CYB_2620 - hypothetical protein 2550 58.90 0 2713442..2714329 - 295 86610052 - CYB_2621 - PRC-barrel domain-containing protein 2551 61.75 0 2714417..2715556 - 379 86610053 - CYB_2622 - glycosyl transferase, group 1 family protein 2552 57.40 0 2715650..2716102 - 150 86610054 - CYB_2623 - Rieske family iron-sulfur cluster-binding protein 2553 51.58 -1 2716343..2716912 - 189 86610055 - CYB_2624 - hypothetical protein 2554 60.68 0 2717150..2719069 - 639 86610056 - CYB_2625 - R3H domain-containing protein 2555 59.46 0 2719085..2720125 - 346 86610057 - CYB_2626 - iron-sulfur cluster-binding protein 2556 57.88 0 2720214..2720657 - 147 86610058 - CYB_2627 - hypothetical protein 2557 59.33 0 2720921..2721424 + 167 86610059 msrB CYB_2628 - methionine-R-sulfoxide reductase 2558 59.83 0 2721474..2722277 + 267 86610060 - CYB_2629 - iron permease 2559 59.15 0 2722676..2722888 - 70 86610061 - CYB_2630 - CP12 domain-containing protein 2560 60.79 0 2723146..2723826 - 226 86610062 - CYB_2631 - ABC transporter, ATP-binding protein 2561 56.67 0 2723863..2724132 - 89 86610063 - CYB_2632 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0