version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2350 58.41 0 2514222..2514875 + 217 86609852 trpG CYB_2417 - anthranilate synthase component II 2351 63.01 +1 2514926..2515690 + 254 86609853 - CYB_2418 - metallo-beta-lactamase superfamily hydrolase 2352 63.32 +1 2515695..2516261 + 188 86609854 - CYB_2419 - ankyrin repeat-containing protein 2353 58.85 0 2516272..2517282 - 336 86609855 - CYB_2420 - deoxyhypusine synthase family protein 2354 59.87 0 2517517..2519619 + 700 86609856 - CYB_2421 - sensory box histidine kinase 2355 61.32 0 2519962..2520204 + 80 86609857 - CYB_2422 - hypothetical protein 2356 62.58 +1 2520220..2520537 + 105 86609858 - CYB_2423 - hypothetical protein 2357 57.51 0 2520573..2521610 - 345 86609859 - CYB_2424 - CBS domain-containing protein 2358 62.19 0 2521912..2523540 - 542 86609860 panC/cmk CYB_2425 - bifunctional pantoate ligase/cytidylate kinase 2359 55.26 0 2523604..2523717 - 37 86609861 petG CYB_2426 - cytochrome b6-f complex subunit PetG 2360 61.68 0 2523864..2525267 + 467 86609862 menE CYB_2428 - O-succinylbenzoic acid--CoA ligase 2361 59.60 0 2525264..2525857 - 197 86609863 - CYB_2427 - DnaJ domain-containing protein 2362 52.92 -1 2525863..2526102 + 79 86609864 - CYB_2429 - hypothetical protein 2363 55.56 0 2526099..2526854 + 251 86609865 - CYB_2430 - ankyrin repeat-containing protein 2364 60.84 0 2528013..2528561 - 182 86609866 - CYB_2431 - hypothetical protein 2365 57.41 0 2528662..2529633 - 323 86609867 panE-2 CYB_2432 - 2-dehydropantoate 2-reductase 2366 60.47 0 2529685..2530233 - 182 86609868 pyrR CYB_2433 - pyrR bifunctional protein 2367 60.64 0 2530394..2530924 + 176 86609869 - CYB_2434 - pentapeptide repeat-containing protein 2368 57.00 0 2531009..2531722 - 237 86609870 - CYB_2435 - heme oxygenase 2369 60.79 0 2532316..2535735 + 1139 86609871 rpoB CYB_2436 - DNA-directed RNA polymerase subunit beta 2370 59.77 0 2535851..2537734 + 627 86609872 rpoC1 CYB_2437 - DNA-directed RNA polymerase subunit gamma 2371 61.00 0 2537788..2541702 + 1304 86609873 rpoC2 CYB_2438 - DNA-directed RNA polymerase subunit beta' 2372 63.49 +1 2541683..2542405 + 240 86609874 - CYB_2440 - uracil-DNA glycosylase family protein 2373 56.97 0 2542402..2543061 - 219 86609875 - CYB_2439 - transcriptional activator TenA, putative 2374 57.02 0 2543382..2544407 - 341 86609876 - CYB_2441 - semialdehyde dehydrogenase family protein 2375 56.85 0 2544518..2545240 - 240 86609877 - CYB_2442 - hypothetical protein 2376 58.58 0 2545444..2545752 + 102 86609878 - CYB_2443 - hypothetical protein 2377 62.16 0 2545767..2546276 - 169 86609879 - CYB_2444 - pentapeptide repeat-containing protein 2378 61.22 0 2546377..2546670 + 97 86609880 gvpV CYB_2445 - gas vesicle protein V 2379 57.58 0 2546845..2547306 + 153 86609881 - CYB_2446 - ABC transporter, ATP-binding protein, truncation 2380 59.48 0 2547307..2548155 - 282 86609882 purU CYB_2447 - formyltetrahydrofolate deformylase 2381 58.62 0 2548220..2548480 - 86 86609883 - CYB_2448 - hypothetical protein 2382 60.58 0 2548484..2548828 - 114 86609884 tatA-2 CYB_2449 - twin-arginine translocation protein TatA 2383 53.62 -1 2548867..2549004 - 45 86609885 - CYB_2450 - hypothetical protein 2384 58.77 0 2549045..2551918 + 957 86609886 secA CYB_2451 - preprotein translocase subunit SecA 2385 59.22 0 2552208..2553134 - 308 86609887 - CYB_2452 - NAD-dependent epimerase/dehydratase family protein 2386 58.33 0 2553191..2553322 + 43 86609888 - CYB_2453 - hypothetical protein 2387 56.95 0 2553364..2554557 - 397 86609889 - CYB_2454 - ISSoc1, transposase 2388 62.37 0 2554733..2555314 + 193 86609890 - CYB_2455 - hypothetical protein 2389 59.57 0 2555326..2556312 - 328 86609891 hemB CYB_2456 - delta-aminolevulinic acid dehydratase 2390 61.23 0 2556338..2557312 - 324 86609892 - CYB_2457 - alpha/beta fold family hydrolase 2391 46.15 -2 2557683..2557799 + 38 86609893 psbI CYB_2458 - photosystem II reaction center I protein I 2392 60.48 0 2558093..2558593 - 166 86609894 - CYB_2459 - hypothetical protein 2393 60.31 0 2558714..2559358 - 214 86609895 - CYB_2460 - BioY family protein 2394 59.84 0 2559382..2560230 + 282 86609896 - CYB_2462 - inositol monophosphatase family protein 2395 58.62 0 2560215..2560835 - 206 86609897 - CYB_2461 - hypothetical protein 2396 60.61 0 2561082..2561180 - 32 86609898 - CYB_2463 - hypothetical protein 2397 61.54 0 2561278..2562057 + 259 86609899 - CYB_2464 - TatD family hydrolase 2398 61.64 0 2562273..2564777 + 834 86609900 - CYB_2465 - sensor histidine kinase 2399 60.75 0 2564782..2565153 + 123 86609901 - CYB_2466 - hypothetical protein 2400 58.64 0 2565177..2565338 - 53 86609902 - CYB_2467 - hypothetical protein 2401 56.20 0 2565690..2566883 + 397 86609903 - CYB_2468 - ISSoc1, transposase 2402 54.98 0 2566904..2567194 + 96 86609904 - CYB_2469 - hypothetical protein 2403 56.41 0 2567349..2567933 + 194 86609905 - CYB_2470 - hypothetical protein 2404 59.41 0 2568126..2569874 - 582 86609906 - CYB_2471 - sensor histidine kinase 2405 58.56 0 2570300..2570743 + 147 86609907 - CYB_2472 - hypothetical protein 2406 44.71 -2 2571006..2571383 + 125 86609908 - CYB_2474 - ISSoc13, transposase orfA 2407 43.38 -2 2571341..2571748 + 135 86609909 - CYB_2475 - ISSoc13, transposase orfB 2408 60.23 0 2571799..2572497 - 232 86609910 - CYB_2476 - hypothetical protein 2409 57.80 0 2572676..2574028 + 450 86609911 ugpB CYB_2477 - glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate binding protein 2410 57.36 0 2574290..2575342 + 350 86609912 upgA CYB_2478 - glycerol-3-phosphate ABC transporter, permease protein 2411 62.26 0 2575434..2575955 + 173 86609913 - CYB_2479 - pentapeptide repeat-containing protein 2412 60.39 0 2576049..2577467 + 472 86609914 gnd CYB_2481 - 6-phosphogluconate dehydrogenase, decarboxylating 2413 63.39 +1 2577464..2578957 - 497 86609915 nadB CYB_2480 - L-aspartate oxidase 2414 57.94 0 2578987..2580075 - 362 86609916 nadA CYB_2482 - quinolinate synthetase 2415 62.24 0 2580274..2581131 - 285 86609917 nadC CYB_2483 - nicotinate-nucleotide pyrophosphorylase 2416 52.71 -1 2581306..2582079 + 257 86609918 - CYB_2484 - ISSoc11, transposase orfA 2417 56.06 0 2582271..2582534 + 87 86609919 - CYB_2485 - ISSoc11, transposase orfB 2418 62.95 +1 2582597..2583430 + 277 86609920 - CYB_2486 - hypothetical protein 2419 60.46 0 2583459..2583764 + 101 86609921 - CYB_2487 - hypothetical protein 2420 63.53 +1 2583792..2584970 + 392 86609922 - CYB_2488 - TPR repeat-containing protein 2421 55.90 0 2585421..2586302 + 293 86609923 - CYB_2489 - RNA polymerase sigma factor SigF 2422 60.10 0 2586670..2587263 + 197 86609924 - CYB_2491 - hypothetical protein 2423 59.37 0 2587260..2587766 - 168 86609925 - CYB_2490 - hypothetical protein 2424 59.57 0 2588130..2589158 + 342 86609926 mreB CYB_2492 - rod shape-determining protein 2425 61.89 0 2589226..2589978 + 250 86609927 mreC CYB_2493 - rod shape-determining protein 2426 57.05 0 2589956..2590600 + 214 86609928 mreD CYB_2494 - rod shape-determining protein MreD 2427 53.47 -1 2590700..2590843 + 47 86609929 - CYB_2495 - hypothetical protein 2428 54.82 0 2590989..2591216 + 75 86609930 - CYB_2496 - iron-sulfur cluster-binding protein 2429 61.61 0 2591415..2591948 - 177 86609931 - CYB_2497 - hypothetical protein 2430 61.39 0 2592797..2593801 - 334 86609932 cobD-2 CYB_2498 - cobalamin biosynthesis protein CobD 2431 60.53 0 2593815..2594270 - 151 86609933 - CYB_2499 - transcriptional regulator, putative 2432 62.22 0 2594549..2595538 + 329 86609934 - CYB_2500 - tetrapyrrole methylase family protein 2433 62.39 0 2595567..2596268 + 233 86609935 - CYB_2501 - DNA-binding response regulator 2434 60.18 0 2596453..2597886 - 477 86609936 atpD CYB_2502 - F0F1 ATP synthase subunit beta 2435 63.50 +1 2598071..2598733 + 220 86609937 - CYB_2503 - hypothetical protein 2436 60.74 0 2598753..2599511 + 252 86609938 - CYB_2505 - hypothetical protein 2437 59.80 0 2599495..2599596 - 33 86609939 - CYB_2504 - hypothetical protein 2438 61.92 0 2599598..2600629 + 343 86609940 - CYB_2507 - succinate dehydrogenase iron-sulfur subunit 2439 60.98 0 2600626..2601732 - 368 86609941 - CYB_2506 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2440 58.27 0 2602624..2603373 - 249 86609942 - CYB_2508 - hypothetical protein 2441 50.00 -2 2603688..2603843 - 51 86609943 - CYB_2509 - hypothetical protein 2442 57.52 0 2603950..2604660 + 236 86609944 - CYB_2510 - hypothetical protein 2443 61.35 0 2604700..2605941 - 413 86609945 tyrS CYB_2511 - tyrosyl-tRNA synthetase 2444 61.17 0 2606114..2608132 + 672 86609946 - CYB_2512 - 1A family penicillin-binding protein 2445 62.78 +1 2608129..2608488 + 119 86609947 - CYB_2513 - hypothetical protein 2446 58.00 0 2608752..2609351 + 199 86609948 sodB CYB_2514 - Fe-superoxide dismutase 2447 61.19 0 2609449..2611092 - 547 86609949 - CYB_2515 - serine/threonine protein kinase 2448 60.94 0 2611355..2613433 + 692 86609950 napA CYB_2516 - monovalent cation:proton antiporter-2 (CPA2) family protein 2449 62.65 +1 2613613..2615805 + 730 86609951 glyS CYB_2517 - glycyl-tRNA synthetase subunit beta 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0