version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2275 63.67 +1 2445287..2446153 - 288 86609779 fabD CYB_2339 - malonyl CoA-acyl carrier protein transacylase 2276 63.97 +1 2446158..2447159 - 333 86609780 fabH CYB_2340 - 3-oxoacyl-(acyl-carrier-protein) synthase III 2277 62.93 +1 2447146..2448270 - 374 86609781 plsX CYB_2341 - putative glycerol-3-phosphate acyltransferase PlsX 2278 58.97 0 2448479..2450206 - 575 86609782 - CYB_2342 - hypothetical protein 2279 61.45 0 2450470..2451390 + 306 86609783 trpC CYB_2343 - indole-3-glycerol-phosphate synthase 2280 56.35 0 2451442..2451693 + 83 86609784 - CYB_2344 - hypothetical protein 2281 62.56 +1 2451753..2451947 + 64 86609785 - CYB_2345 - copper metallochaperone 2282 61.36 0 2452060..2454375 + 771 86609786 - CYB_2346 - copper-translocating P-type ATPase 2283 60.82 0 2454670..2455713 + 347 86609787 cbiX CYB_2347 - sirohydrochlorin cobaltochelatase 2284 58.86 0 2455814..2456710 + 298 86609788 - CYB_2349 - hypothetical protein 2285 57.93 0 2456707..2457324 - 205 86609789 - CYB_2348 - PAP_fibrillin 2286 60.08 0 2457380..2458093 - 237 86609790 - CYB_2350 - Sua5/YciO/YrdC/YwlC family protein 2287 62.87 +1 2458112..2458453 - 113 86609791 - CYB_2351 - hypothetical protein 2288 61.02 0 2458547..2459590 - 347 86609792 obgE CYB_2352 - GTPase ObgE 2289 58.00 0 2459786..2460754 + 322 86609793 rpsA CYB_2353 - 30S ribosomal protein S1 2290 55.82 0 2461085..2461969 - 294 86609794 - CYB_2354 - hypothetical protein 2291 50.00 -2 2461923..2462048 - 41 86609795 - CYB_2355 - hypothetical protein 2292 59.75 0 2462024..2462992 - 322 86609796 - CYB_2356 - putative cobalamin biosynthesis protein CobW 2293 58.39 0 2463159..2463617 - 152 86609797 - CYB_2357 - glyoxalase family protein 2294 61.21 0 2463813..2466614 + 933 86609798 topA CYB_2358 - DNA topoisomerase I 2295 61.31 0 2466704..2466871 - 55 86609799 - CYB_2359 - hypothetical protein 2296 62.62 +1 2466909..2468069 - 386 86609800 - CYB_2360 - SpoIID/LytB domain-containing protein 2297 51.32 -1 2468121..2469677 - 518 86609801 - CYB_2361 - radical SAM domain-containing protein 2298 53.50 -1 2470005..2470361 - 118 86609802 - CYB_2362 - hypothetical protein 2299 58.76 0 2470406..2470696 - 96 86609803 - CYB_2363 - BolA protein 2300 53.80 -1 2470726..2471067 - 113 86609804 - CYB_2364 - glutaredoxin-like protein 2301 43.82 -2 2471569..2472579 + 336 86609805 - CYB_2365 - anion:cation symporter (ACS) family protein 2302 36.93 -2 2472580..2472996 + 138 86609806 arsC CYB_2366 - arsenate reductase 2303 43.29 -2 2473048..2474172 - 374 86609807 - CYB_2367 - PKD domain-containing protein 2304 60.16 0 2474160..2475143 - 327 86609808 tilS CYB_2368 - tRNA(Ile)-lysidine synthetase 2305 58.03 0 2475197..2476366 - 389 86609809 hrcA CYB_2369 - heat-inducible transcription repressor 2306 58.75 0 2476794..2477096 + 100 86609810 ureA CYB_2370 - urease, gamma subunit 2307 60.00 0 2477690..2477944 + 84 86609811 - CYB_2372 - hypothetical protein 2308 63.44 +1 2478040..2480457 - 805 86609812 - CYB_2373 - recombination and DNA strand exchange inhibitor protein 2309 55.56 0 2480949..2481353 + 134 86609813 - CYB_2374 - iron-sulfur cluster-binding protein 2310 51.80 -1 2481466..2481687 + 73 86609814 - CYB_2375 - hypothetical protein 2311 56.85 0 2481716..2482051 + 111 86609815 - CYB_2376 - hypothetical protein 2312 60.43 0 2482282..2482890 + 202 86609816 - CYB_2377 - response regulator 2313 60.39 0 2483164..2484087 + 307 86609817 ppnK CYB_2378 - inorganic polyphosphate/ATP-NAD kinase 2314 61.88 0 2484335..2484835 - 166 86609818 - CYB_2380 - pentapeptide repeat-containing protein 2315 60.27 0 2484994..2485290 - 98 86609819 - CYB_2381 - hypothetical protein 2316 56.32 0 2485355..2485528 - 57 86609820 - CYB_2382 - hypothetical protein 2317 61.73 0 2485554..2486282 + 242 86609821 - CYB_2383 - hydrophobic amino acid uptake transporter ABC transporter family ATP-binding protein 2318 63.66 +1 2486295..2487725 - 476 86609822 - CYB_2384 - pyruvate kinase 2319 58.69 0 2487938..2489140 + 400 86609823 - CYB_2385 - YjgP/YjgQ family protein 2320 54.60 0 2489177..2489350 + 57 86609824 - CYB_2386 - hypothetical protein 2321 59.70 0 2489433..2489963 - 176 86609825 - CYB_2387 - TPR repeat-containing protein 2322 57.97 0 2490127..2491011 - 294 86609826 - CYB_2388 - mannosyl-3-phosphoglycerate phosphatase 2323 59.86 0 2491282..2491971 - 229 86609827 upp CYB_2389 - uracil phosphoribosyltransferase 2324 59.11 0 2492130..2492354 - 74 86609828 - CYB_2390 - hypothetical protein 2325 58.68 0 2492543..2493619 + 358 86609829 - CYB_2391 - putative secreted protein 2326 54.09 -1 2493816..2493974 - 52 86609830 - CYB_2392 - hypothetical protein 2327 64.84 +1 2494156..2495304 + 382 86609831 thiO CYB_2393 - glycine oxidase ThiO 2328 59.09 0 2495292..2495489 + 65 86609832 thiS CYB_2394 - thiamine biosynthesis protein ThiS 2329 65.25 +1 2495573..2496349 + 258 86609833 thiG CYB_2395 - thiazole synthase 2330 61.45 0 2496372..2497004 - 210 86609834 - CYB_2396 - UbiE/COQ5 family methlytransferase 2331 59.14 0 2497103..2497912 + 269 86609835 - CYB_2397 - hypothetical protein 2332 58.16 0 2498044..2498184 + 46 86609836 - CYB_2398 - hypothetical protein 2333 62.01 0 2498324..2499439 + 371 86609837 - CYB_2399 - glycosyl transferase, group 1 2334 57.11 0 2499535..2500518 - 327 86609838 - CYB_2400 - ABC transporter, ATP-binding protein 2335 58.77 0 2500651..2500764 - 37 86609839 - CYB_2401 - hypothetical protein 2336 58.94 0 2500952..2501611 + 219 86609840 - CYB_2402 - CDP-alcohol phosphatidyltransferase family protein 2337 61.77 0 2501738..2502595 + 285 86609841 - CYB_2403 - cyclopropane-fatty-acyl-phospholipid synthase family protein 2338 59.74 0 2502643..2503263 - 206 86609842 - CYB_2404 - uracil-DNA glycosylase 2339 58.66 0 2503544..2505004 + 486 86609843 - CYB_2405 - U62 family peptidase 2340 56.67 0 2505025..2505474 + 149 90296803 - CYB_2406 - hypothetical protein 2341 44.71 -2 2505501..2505878 + 125 86609844 - CYB_2407 - ISSoc13, transposase orfA 2342 43.14 -2 2505836..2506243 + 135 86609845 - CYB_2408 - ISSoc13, transposase orfB 2343 53.12 -1 2506240..2506704 + 154 90296804 - CYB_2409 - hypothetical protein 2344 54.92 0 2506709..2507857 + 382 86609846 - CYB_2410 - ISSoc1, transposase 2345 58.24 0 2508113..2509453 + 446 86609847 - CYB_2411 - tldD/pmbA family protein 2346 62.03 0 2509469..2510266 + 265 86609848 - CYB_2412 - hypothetical protein 2347 58.74 0 2510263..2510691 + 142 86609849 - CYB_2413 - hypothetical protein 2348 56.17 0 2511197..2511577 - 126 86609850 - CYB_2415 - hypothetical protein 2349 58.99 0 2511618..2514026 - 802 86609851 - CYB_2416 - putative helicase 2350 58.41 0 2514222..2514875 + 217 86609852 trpG CYB_2417 - anthranilate synthase component II 2351 63.01 +1 2514926..2515690 + 254 86609853 - CYB_2418 - metallo-beta-lactamase superfamily hydrolase 2352 63.32 +1 2515695..2516261 + 188 86609854 - CYB_2419 - ankyrin repeat-containing protein 2353 58.85 0 2516272..2517282 - 336 86609855 - CYB_2420 - deoxyhypusine synthase family protein 2354 59.87 0 2517517..2519619 + 700 86609856 - CYB_2421 - sensory box histidine kinase 2355 61.32 0 2519962..2520204 + 80 86609857 - CYB_2422 - hypothetical protein 2356 62.58 +1 2520220..2520537 + 105 86609858 - CYB_2423 - hypothetical protein 2357 57.51 0 2520573..2521610 - 345 86609859 - CYB_2424 - CBS domain-containing protein 2358 62.19 0 2521912..2523540 - 542 86609860 panC/cmk CYB_2425 - bifunctional pantoate ligase/cytidylate kinase 2359 55.26 0 2523604..2523717 - 37 86609861 petG CYB_2426 - cytochrome b6-f complex subunit PetG 2360 61.68 0 2523864..2525267 + 467 86609862 menE CYB_2428 - O-succinylbenzoic acid--CoA ligase 2361 59.60 0 2525264..2525857 - 197 86609863 - CYB_2427 - DnaJ domain-containing protein 2362 52.92 -1 2525863..2526102 + 79 86609864 - CYB_2429 - hypothetical protein 2363 55.56 0 2526099..2526854 + 251 86609865 - CYB_2430 - ankyrin repeat-containing protein 2364 60.84 0 2528013..2528561 - 182 86609866 - CYB_2431 - hypothetical protein 2365 57.41 0 2528662..2529633 - 323 86609867 panE-2 CYB_2432 - 2-dehydropantoate 2-reductase 2366 60.47 0 2529685..2530233 - 182 86609868 pyrR CYB_2433 - pyrR bifunctional protein 2367 60.64 0 2530394..2530924 + 176 86609869 - CYB_2434 - pentapeptide repeat-containing protein 2368 57.00 0 2531009..2531722 - 237 86609870 - CYB_2435 - heme oxygenase 2369 60.79 0 2532316..2535735 + 1139 86609871 rpoB CYB_2436 - DNA-directed RNA polymerase subunit beta 2370 59.77 0 2535851..2537734 + 627 86609872 rpoC1 CYB_2437 - DNA-directed RNA polymerase subunit gamma 2371 61.00 0 2537788..2541702 + 1304 86609873 rpoC2 CYB_2438 - DNA-directed RNA polymerase subunit beta' 2372 63.49 +1 2541683..2542405 + 240 86609874 - CYB_2440 - uracil-DNA glycosylase family protein 2373 56.97 0 2542402..2543061 - 219 86609875 - CYB_2439 - transcriptional activator TenA, putative 2374 57.02 0 2543382..2544407 - 341 86609876 - CYB_2441 - semialdehyde dehydrogenase family protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0