version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2232 55.56 0 2399770..2400417 + 215 86609736 - CYB_2295 - hypothetical protein 2233 58.78 0 2401039..2401989 + 316 86609737 - CYB_2296 - LysR family transcriptional regulator 2234 59.76 0 2402264..2403088 + 274 86609738 - CYB_2297 - alpha/beta fold family hydrolase 2235 62.89 +1 2403206..2404264 - 352 86609739 thrC-1 CYB_2298 - threonine synthase 2236 63.93 +1 2404435..2406081 - 548 86609740 - CYB_2299 - isochorismate synthase 2237 61.57 0 2406353..2407294 + 313 86609741 menA CYB_2300 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2238 62.32 0 2407449..2409242 + 597 86609742 - CYB_2301 - hypothetical protein 2239 55.92 0 2409410..2410498 + 362 86609743 - CYB_2302 - YjgP/YjgQ permease 2240 62.02 0 2410495..2413935 + 1146 86609744 - CYB_2303 - hypothetical protein 2241 63.73 +1 2413980..2415611 - 543 86609745 - CYB_2304 - phosphoglucomutase 2242 58.20 0 2415751..2417037 - 428 86609746 - CYB_2305 - major facilitator transporter 2243 59.74 0 2417063..2418073 - 336 86609747 gap-3 CYB_2306 - glyceraldehyde-3-phosphate dehydrogenase, type I 2244 59.80 0 2418300..2418983 + 227 86609748 - CYB_2307 - hypothetical protein 2245 55.42 0 2419213..2419452 + 79 86609749 - CYB_2308 - DNA-directed RNA polymerase subunit omega 2246 60.59 0 2419549..2421423 - 624 86609750 - CYB_2309 - small conductance mechanosensitive ion channel (MscS) family protein 2247 59.25 0 2421462..2422580 - 372 86609751 cax CYB_2310 - calcium/proton exchanger 2248 59.40 0 2422796..2423566 - 256 86609752 - CYB_2311 - hypothetical protein 2249 56.06 0 2423643..2423906 - 87 86609753 - CYB_2312 - ISSoc11, transposase orfB 2250 53.75 -1 2424098..2424871 - 257 86609754 - CYB_2313 - ISSoc11, transposase orfA 2251 58.01 0 2425230..2425610 - 126 86609755 - CYB_2314 - hypothetical protein 2252 60.47 0 2426036..2426938 - 300 86609756 - CYB_2315 - putative cysteine synthase B 2253 61.38 0 2427164..2428297 + 377 86609757 cobO-1 CYB_2316 - hypothetical protein 2254 62.13 0 2428297..2429046 + 249 86609758 - CYB_2317 - acyltransferase family protein 2255 63.95 +1 2429085..2429858 + 257 86609759 - CYB_2319 - alpha/beta fold family hydrolase 2256 62.81 +1 2429836..2430561 - 241 86609760 - CYB_2318 - haloacid dehalogenase, IA family protein 2257 59.45 0 2430558..2431541 - 327 86609761 - CYB_2320 - PhoH family protein 2258 47.71 -2 2431967..2432119 + 50 86609762 - CYB_2321 - hypothetical protein 2259 57.56 0 2432097..2432645 + 182 86609763 - CYB_2322 - hypothetical protein 2260 57.05 0 2433115..2433426 - 103 86609764 - CYB_2324 - hypothetical protein 2261 56.94 0 2433609..2433896 - 95 86609765 - CYB_2325 - hypothetical protein 2262 59.95 0 2434027..2434398 - 123 86609766 - CYB_2326 - hypothetical protein 2263 60.57 0 2434458..2435588 + 376 86609767 - CYB_2328 - geranylgeranyl reductase family protein 2264 58.87 0 2435565..2436077 - 170 86609768 - CYB_2327 - sensor histidine kinase 2265 59.15 0 2436197..2436928 - 243 86609769 - CYB_2329 - OmpA family protein 2266 57.12 0 2437164..2437823 - 219 86609770 - CYB_2330 - S24 family peptidase 2267 56.22 0 2438466..2438714 + 82 86609771 - CYB_2331 - hypothetical protein 2268 55.10 0 2438815..2439177 + 120 86609772 - CYB_2332 - NADH dehydrogenase subunit A 2269 59.86 0 2439174..2439908 + 244 86609773 - CYB_2333 - NADH dehydrogenase subunit B 2270 58.15 0 2439910..2440461 + 183 86609774 - CYB_2334 - NADH dehydrogenase subunit J 2271 56.90 0 2440509..2440682 + 57 86609775 - CYB_2335 - hypothetical protein 2272 60.19 0 2440723..2441973 + 416 86609776 - CYB_2336 - hypothetical protein 2273 52.60 -1 2442009..2442875 - 288 86609777 - CYB_2337 - hypothetical protein 2274 61.91 0 2443451..2444986 + 511 86609778 - CYB_2338 - glycosyl hydrolase domain-containing protein 2275 63.67 +1 2445287..2446153 - 288 86609779 fabD CYB_2339 - malonyl CoA-acyl carrier protein transacylase 2276 63.97 +1 2446158..2447159 - 333 86609780 fabH CYB_2340 - 3-oxoacyl-(acyl-carrier-protein) synthase III 2277 62.93 +1 2447146..2448270 - 374 86609781 plsX CYB_2341 - putative glycerol-3-phosphate acyltransferase PlsX 2278 58.97 0 2448479..2450206 - 575 86609782 - CYB_2342 - hypothetical protein 2279 61.45 0 2450470..2451390 + 306 86609783 trpC CYB_2343 - indole-3-glycerol-phosphate synthase 2280 56.35 0 2451442..2451693 + 83 86609784 - CYB_2344 - hypothetical protein 2281 62.56 +1 2451753..2451947 + 64 86609785 - CYB_2345 - copper metallochaperone 2282 61.36 0 2452060..2454375 + 771 86609786 - CYB_2346 - copper-translocating P-type ATPase 2283 60.82 0 2454670..2455713 + 347 86609787 cbiX CYB_2347 - sirohydrochlorin cobaltochelatase 2284 58.86 0 2455814..2456710 + 298 86609788 - CYB_2349 - hypothetical protein 2285 57.93 0 2456707..2457324 - 205 86609789 - CYB_2348 - PAP_fibrillin 2286 60.08 0 2457380..2458093 - 237 86609790 - CYB_2350 - Sua5/YciO/YrdC/YwlC family protein 2287 62.87 +1 2458112..2458453 - 113 86609791 - CYB_2351 - hypothetical protein 2288 61.02 0 2458547..2459590 - 347 86609792 obgE CYB_2352 - GTPase ObgE 2289 58.00 0 2459786..2460754 + 322 86609793 rpsA CYB_2353 - 30S ribosomal protein S1 2290 55.82 0 2461085..2461969 - 294 86609794 - CYB_2354 - hypothetical protein 2291 50.00 -2 2461923..2462048 - 41 86609795 - CYB_2355 - hypothetical protein 2292 59.75 0 2462024..2462992 - 322 86609796 - CYB_2356 - putative cobalamin biosynthesis protein CobW 2293 58.39 0 2463159..2463617 - 152 86609797 - CYB_2357 - glyoxalase family protein 2294 61.21 0 2463813..2466614 + 933 86609798 topA CYB_2358 - DNA topoisomerase I 2295 61.31 0 2466704..2466871 - 55 86609799 - CYB_2359 - hypothetical protein 2296 62.62 +1 2466909..2468069 - 386 86609800 - CYB_2360 - SpoIID/LytB domain-containing protein 2297 51.32 -1 2468121..2469677 - 518 86609801 - CYB_2361 - radical SAM domain-containing protein 2298 53.50 -1 2470005..2470361 - 118 86609802 - CYB_2362 - hypothetical protein 2299 58.76 0 2470406..2470696 - 96 86609803 - CYB_2363 - BolA protein 2300 53.80 -1 2470726..2471067 - 113 86609804 - CYB_2364 - glutaredoxin-like protein 2301 43.82 -2 2471569..2472579 + 336 86609805 - CYB_2365 - anion:cation symporter (ACS) family protein 2302 36.93 -2 2472580..2472996 + 138 86609806 arsC CYB_2366 - arsenate reductase 2303 43.29 -2 2473048..2474172 - 374 86609807 - CYB_2367 - PKD domain-containing protein 2304 60.16 0 2474160..2475143 - 327 86609808 tilS CYB_2368 - tRNA(Ile)-lysidine synthetase 2305 58.03 0 2475197..2476366 - 389 86609809 hrcA CYB_2369 - heat-inducible transcription repressor 2306 58.75 0 2476794..2477096 + 100 86609810 ureA CYB_2370 - urease, gamma subunit 2307 60.00 0 2477690..2477944 + 84 86609811 - CYB_2372 - hypothetical protein 2308 63.44 +1 2478040..2480457 - 805 86609812 - CYB_2373 - recombination and DNA strand exchange inhibitor protein 2309 55.56 0 2480949..2481353 + 134 86609813 - CYB_2374 - iron-sulfur cluster-binding protein 2310 51.80 -1 2481466..2481687 + 73 86609814 - CYB_2375 - hypothetical protein 2311 56.85 0 2481716..2482051 + 111 86609815 - CYB_2376 - hypothetical protein 2312 60.43 0 2482282..2482890 + 202 86609816 - CYB_2377 - response regulator 2313 60.39 0 2483164..2484087 + 307 86609817 ppnK CYB_2378 - inorganic polyphosphate/ATP-NAD kinase 2314 61.88 0 2484335..2484835 - 166 86609818 - CYB_2380 - pentapeptide repeat-containing protein 2315 60.27 0 2484994..2485290 - 98 86609819 - CYB_2381 - hypothetical protein 2316 56.32 0 2485355..2485528 - 57 86609820 - CYB_2382 - hypothetical protein 2317 61.73 0 2485554..2486282 + 242 86609821 - CYB_2383 - hydrophobic amino acid uptake transporter ABC transporter family ATP-binding protein 2318 63.66 +1 2486295..2487725 - 476 86609822 - CYB_2384 - pyruvate kinase 2319 58.69 0 2487938..2489140 + 400 86609823 - CYB_2385 - YjgP/YjgQ family protein 2320 54.60 0 2489177..2489350 + 57 86609824 - CYB_2386 - hypothetical protein 2321 59.70 0 2489433..2489963 - 176 86609825 - CYB_2387 - TPR repeat-containing protein 2322 57.97 0 2490127..2491011 - 294 86609826 - CYB_2388 - mannosyl-3-phosphoglycerate phosphatase 2323 59.86 0 2491282..2491971 - 229 86609827 upp CYB_2389 - uracil phosphoribosyltransferase 2324 59.11 0 2492130..2492354 - 74 86609828 - CYB_2390 - hypothetical protein 2325 58.68 0 2492543..2493619 + 358 86609829 - CYB_2391 - putative secreted protein 2326 54.09 -1 2493816..2493974 - 52 86609830 - CYB_2392 - hypothetical protein 2327 64.84 +1 2494156..2495304 + 382 86609831 thiO CYB_2393 - glycine oxidase ThiO 2328 59.09 0 2495292..2495489 + 65 86609832 thiS CYB_2394 - thiamine biosynthesis protein ThiS 2329 65.25 +1 2495573..2496349 + 258 86609833 thiG CYB_2395 - thiazole synthase 2330 61.45 0 2496372..2497004 - 210 86609834 - CYB_2396 - UbiE/COQ5 family methlytransferase 2331 59.14 0 2497103..2497912 + 269 86609835 - CYB_2397 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0