version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2204 61.99 0 2371217..2372797 - 526 86609708 - CYB_2266 - PsbB/PsbC family photosystem II protein 2205 46.67 -2 2372845..2373354 - 169 86609709 - CYB_2267 - flavodoxin FldA 2206 58.36 0 2373428..2374462 - 344 86609710 - CYB_2268 - PsbB/PsbC family photosystem II protein 2207 57.58 0 2374853..2376085 + 410 86609711 - CYB_2269 - putative iron-regulated protein A 2208 60.33 0 2376131..2377504 + 457 86609712 - CYB_2271 - hypothetical protein 2209 50.52 -1 2377501..2378175 - 224 86609713 - CYB_2270 - putative hydroxylase 2210 48.33 -2 2378537..2379196 + 219 86609714 - CYB_2273 - hypothetical protein 2211 44.44 -2 2379193..2379525 - 110 86609715 - CYB_2272 - cupin domain-containing protein 2212 48.52 -2 2379525..2380301 - 258 86609716 - CYB_2274 - hypothetical protein 2213 47.36 -2 2380544..2381206 - 220 86609717 - CYB_2275 - hypothetical protein 2214 63.01 +1 2381533..2383281 + 582 86609718 mutL CYB_2276 - DNA mismatch repair protein 2215 61.38 0 2383318..2384169 + 283 86609719 - CYB_2278 - VKORC1/thioredoxin domain-containing protein 2216 59.54 0 2384145..2385239 - 364 86609720 - CYB_2277 - response regulator 2217 61.49 0 2385306..2386193 - 295 86609721 btpA CYB_2279 - photosystem I biogenesis protein BtpA 2218 61.61 0 2386225..2387370 - 381 86609722 pyrD CYB_2280 - dihydroorotate dehydrogenase 2 2219 62.21 0 2387498..2388799 - 433 86609723 - CYB_2281 - O-antigen polymerase family protein 2220 60.94 0 2388799..2389182 - 127 86609724 - CYB_2282 - ferredoxin, 2Fe-2S 2221 56.98 0 2389380..2389823 + 147 86609725 - CYB_2283 - mannose-6-phosphate isomerase 2222 60.03 0 2389874..2392255 - 793 86609726 - CYB_2284 - M48B family peptidase 2223 52.57 -1 2392458..2392904 - 148 86609727 - CYB_2285 - FUR family transcriptional regulator 2224 58.53 0 2393261..2393641 + 126 86609728 - CYB_2286 - hypothetical protein 2225 61.54 0 2393681..2395045 + 454 86609729 - CYB_2287 - putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2226 59.02 0 2395303..2395812 + 169 86609730 - CYB_2289 - hypothetical protein 2227 59.23 0 2395870..2396205 + 111 86609731 - CYB_2290 - hypothetical protein 2228 56.00 0 2396321..2396470 + 49 86609732 - CYB_2291 - hypothetical protein 2229 60.24 0 2396569..2397330 + 253 86609733 pyrH CYB_2292 - uridylate kinase 2230 60.42 0 2397587..2398834 + 415 86609734 - CYB_2293 - hypothetical protein 2231 57.17 0 2398846..2399319 + 157 86609735 yqeG CYB_2294 - HAD family phosphatase 2232 55.56 0 2399770..2400417 + 215 86609736 - CYB_2295 - hypothetical protein 2233 58.78 0 2401039..2401989 + 316 86609737 - CYB_2296 - LysR family transcriptional regulator 2234 59.76 0 2402264..2403088 + 274 86609738 - CYB_2297 - alpha/beta fold family hydrolase 2235 62.89 +1 2403206..2404264 - 352 86609739 thrC-1 CYB_2298 - threonine synthase 2236 63.93 +1 2404435..2406081 - 548 86609740 - CYB_2299 - isochorismate synthase 2237 61.57 0 2406353..2407294 + 313 86609741 menA CYB_2300 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2238 62.32 0 2407449..2409242 + 597 86609742 - CYB_2301 - hypothetical protein 2239 55.92 0 2409410..2410498 + 362 86609743 - CYB_2302 - YjgP/YjgQ permease 2240 62.02 0 2410495..2413935 + 1146 86609744 - CYB_2303 - hypothetical protein 2241 63.73 +1 2413980..2415611 - 543 86609745 - CYB_2304 - phosphoglucomutase 2242 58.20 0 2415751..2417037 - 428 86609746 - CYB_2305 - major facilitator transporter 2243 59.74 0 2417063..2418073 - 336 86609747 gap-3 CYB_2306 - glyceraldehyde-3-phosphate dehydrogenase, type I 2244 59.80 0 2418300..2418983 + 227 86609748 - CYB_2307 - hypothetical protein 2245 55.42 0 2419213..2419452 + 79 86609749 - CYB_2308 - DNA-directed RNA polymerase subunit omega 2246 60.59 0 2419549..2421423 - 624 86609750 - CYB_2309 - small conductance mechanosensitive ion channel (MscS) family protein 2247 59.25 0 2421462..2422580 - 372 86609751 cax CYB_2310 - calcium/proton exchanger 2248 59.40 0 2422796..2423566 - 256 86609752 - CYB_2311 - hypothetical protein 2249 56.06 0 2423643..2423906 - 87 86609753 - CYB_2312 - ISSoc11, transposase orfB 2250 53.75 -1 2424098..2424871 - 257 86609754 - CYB_2313 - ISSoc11, transposase orfA 2251 58.01 0 2425230..2425610 - 126 86609755 - CYB_2314 - hypothetical protein 2252 60.47 0 2426036..2426938 - 300 86609756 - CYB_2315 - putative cysteine synthase B 2253 61.38 0 2427164..2428297 + 377 86609757 cobO-1 CYB_2316 - hypothetical protein 2254 62.13 0 2428297..2429046 + 249 86609758 - CYB_2317 - acyltransferase family protein 2255 63.95 +1 2429085..2429858 + 257 86609759 - CYB_2319 - alpha/beta fold family hydrolase 2256 62.81 +1 2429836..2430561 - 241 86609760 - CYB_2318 - haloacid dehalogenase, IA family protein 2257 59.45 0 2430558..2431541 - 327 86609761 - CYB_2320 - PhoH family protein 2258 47.71 -2 2431967..2432119 + 50 86609762 - CYB_2321 - hypothetical protein 2259 57.56 0 2432097..2432645 + 182 86609763 - CYB_2322 - hypothetical protein 2260 57.05 0 2433115..2433426 - 103 86609764 - CYB_2324 - hypothetical protein 2261 56.94 0 2433609..2433896 - 95 86609765 - CYB_2325 - hypothetical protein 2262 59.95 0 2434027..2434398 - 123 86609766 - CYB_2326 - hypothetical protein 2263 60.57 0 2434458..2435588 + 376 86609767 - CYB_2328 - geranylgeranyl reductase family protein 2264 58.87 0 2435565..2436077 - 170 86609768 - CYB_2327 - sensor histidine kinase 2265 59.15 0 2436197..2436928 - 243 86609769 - CYB_2329 - OmpA family protein 2266 57.12 0 2437164..2437823 - 219 86609770 - CYB_2330 - S24 family peptidase 2267 56.22 0 2438466..2438714 + 82 86609771 - CYB_2331 - hypothetical protein 2268 55.10 0 2438815..2439177 + 120 86609772 - CYB_2332 - NADH dehydrogenase subunit A 2269 59.86 0 2439174..2439908 + 244 86609773 - CYB_2333 - NADH dehydrogenase subunit B 2270 58.15 0 2439910..2440461 + 183 86609774 - CYB_2334 - NADH dehydrogenase subunit J 2271 56.90 0 2440509..2440682 + 57 86609775 - CYB_2335 - hypothetical protein 2272 60.19 0 2440723..2441973 + 416 86609776 - CYB_2336 - hypothetical protein 2273 52.60 -1 2442009..2442875 - 288 86609777 - CYB_2337 - hypothetical protein 2274 61.91 0 2443451..2444986 + 511 86609778 - CYB_2338 - glycosyl hydrolase domain-containing protein 2275 63.67 +1 2445287..2446153 - 288 86609779 fabD CYB_2339 - malonyl CoA-acyl carrier protein transacylase 2276 63.97 +1 2446158..2447159 - 333 86609780 fabH CYB_2340 - 3-oxoacyl-(acyl-carrier-protein) synthase III 2277 62.93 +1 2447146..2448270 - 374 86609781 plsX CYB_2341 - putative glycerol-3-phosphate acyltransferase PlsX 2278 58.97 0 2448479..2450206 - 575 86609782 - CYB_2342 - hypothetical protein 2279 61.45 0 2450470..2451390 + 306 86609783 trpC CYB_2343 - indole-3-glycerol-phosphate synthase 2280 56.35 0 2451442..2451693 + 83 86609784 - CYB_2344 - hypothetical protein 2281 62.56 +1 2451753..2451947 + 64 86609785 - CYB_2345 - copper metallochaperone 2282 61.36 0 2452060..2454375 + 771 86609786 - CYB_2346 - copper-translocating P-type ATPase 2283 60.82 0 2454670..2455713 + 347 86609787 cbiX CYB_2347 - sirohydrochlorin cobaltochelatase 2284 58.86 0 2455814..2456710 + 298 86609788 - CYB_2349 - hypothetical protein 2285 57.93 0 2456707..2457324 - 205 86609789 - CYB_2348 - PAP_fibrillin 2286 60.08 0 2457380..2458093 - 237 86609790 - CYB_2350 - Sua5/YciO/YrdC/YwlC family protein 2287 62.87 +1 2458112..2458453 - 113 86609791 - CYB_2351 - hypothetical protein 2288 61.02 0 2458547..2459590 - 347 86609792 obgE CYB_2352 - GTPase ObgE 2289 58.00 0 2459786..2460754 + 322 86609793 rpsA CYB_2353 - 30S ribosomal protein S1 2290 55.82 0 2461085..2461969 - 294 86609794 - CYB_2354 - hypothetical protein 2291 50.00 -2 2461923..2462048 - 41 86609795 - CYB_2355 - hypothetical protein 2292 59.75 0 2462024..2462992 - 322 86609796 - CYB_2356 - putative cobalamin biosynthesis protein CobW 2293 58.39 0 2463159..2463617 - 152 86609797 - CYB_2357 - glyoxalase family protein 2294 61.21 0 2463813..2466614 + 933 86609798 topA CYB_2358 - DNA topoisomerase I 2295 61.31 0 2466704..2466871 - 55 86609799 - CYB_2359 - hypothetical protein 2296 62.62 +1 2466909..2468069 - 386 86609800 - CYB_2360 - SpoIID/LytB domain-containing protein 2297 51.32 -1 2468121..2469677 - 518 86609801 - CYB_2361 - radical SAM domain-containing protein 2298 53.50 -1 2470005..2470361 - 118 86609802 - CYB_2362 - hypothetical protein 2299 58.76 0 2470406..2470696 - 96 86609803 - CYB_2363 - BolA protein 2300 53.80 -1 2470726..2471067 - 113 86609804 - CYB_2364 - glutaredoxin-like protein 2301 43.82 -2 2471569..2472579 + 336 86609805 - CYB_2365 - anion:cation symporter (ACS) family protein 2302 36.93 -2 2472580..2472996 + 138 86609806 arsC CYB_2366 - arsenate reductase 2303 43.29 -2 2473048..2474172 - 374 86609807 - CYB_2367 - PKD domain-containing protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0