version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2159 57.14 0 2324650..2324943 + 97 86609663 gatC CYB_2217 - glutamyl-tRNA(Gln) amidotransferase, C subunit 2160 61.66 0 2325600..2326238 - 212 86609664 - CYB_2220 - Crp/FNR family transcriptional regulator 2161 58.14 0 2326231..2326359 - 42 86609665 - CYB_2221 - hypothetical protein 2162 57.49 0 2326545..2326958 + 137 86609666 atpC CYB_2222 - ATP synthase F1, epsilon subunit 2163 55.13 0 2327106..2327495 + 129 86609667 - CYB_2223 - ISSoc11, transposase orfA, truncation 2164 55.68 0 2327701..2327964 + 87 86609668 - CYB_2224 - ISSoc11, transposase orfB 2165 61.20 0 2328106..2329659 - 517 86609669 - CYB_2225 - tranporter, outer membrane factor (OMF) family 2166 60.17 0 2329952..2331613 + 553 86609670 - CYB_2226 - hypothetical protein 2167 65.75 +1 2331655..2334060 + 801 86609671 priA CYB_2227 - primosome assembly protein PriA 2168 61.02 0 2334173..2334544 + 123 86609672 - CYB_2228 - hypothetical protein 2169 63.39 +1 2334541..2335089 + 182 86609673 - CYB_2230 - hypothetical protein 2170 59.86 0 2335086..2336642 - 518 86609674 metG CYB_2229 - methionyl-tRNA synthetase 2171 60.68 0 2336731..2338602 + 623 86609675 - CYB_2231 - hypothetical protein 2172 60.48 0 2338668..2338958 + 96 86609676 - CYB_2232 - hypothetical protein 2173 62.13 0 2339049..2340305 + 418 86609677 - CYB_2233 - hypothetical protein 2174 63.94 +1 2340849..2342864 + 671 86609678 - CYB_2234 - hydantoinase/oxoprolinase family protein 2175 58.97 0 2343336..2344115 + 259 86609679 - CYB_2236 - S4 domain-containing protein 2176 56.69 0 2344165..2345076 - 303 86609680 ubiA CYB_2237 - tocopherol phytyltransferase 2177 56.65 0 2345085..2345573 - 162 86609681 - CYB_2238 - hypothetical protein 2178 59.30 0 2345663..2346151 - 162 86609682 - CYB_2239 - R3H domain-containing protein 2179 53.51 -1 2346183..2346296 + 37 86609683 - CYB_2240 - hypothetical protein 2180 57.93 0 2346624..2347814 - 396 86609684 oxaA CYB_2241 - putative inner membrane protein translocase component YidC 2181 57.28 0 2348391..2348912 + 173 86609685 ppa CYB_2243 - inorganic pyrophosphatase 2182 60.42 0 2348919..2350535 - 538 86609686 - CYB_2244 - radical SAM domain-containing protein 2183 59.32 0 2350829..2352202 - 457 86609687 nusA CYB_2245 - transcription elongation factor NusA 2184 57.96 0 2352338..2352808 - 156 86609688 - CYB_2246 - hypothetical protein 2185 48.39 -2 2353021..2353113 + 30 86609689 - CYB_2247 - hypothetical protein 2186 60.47 0 2353110..2353625 + 171 86609690 - CYB_2248 - hypothetical protein 2187 43.14 -2 2353708..2354115 - 135 86609691 - CYB_2249 - ISSoc13, transposase orfB 2188 44.71 -2 2354073..2354450 - 125 86609692 - CYB_2250 - ISSoc13, transposase orfA 2189 54.40 -1 2354503..2355138 - 211 86609693 - CYB_2251 - UbiE/COQ5 family methlytransferase 2190 61.46 0 2355470..2356333 - 287 86609694 - CYB_2252 - arginase family protein 2191 55.87 0 2356577..2357002 + 141 86609695 psaD CYB_2253 - photosystem I reaction center subunit II 2192 57.14 0 2357237..2357845 - 202 86609696 - CYB_2254 - anti-oxidant AhpCTSA family protein 2193 61.05 0 2358010..2358276 + 88 86609697 - CYB_2255 - hypothetical protein 2194 57.61 0 2358350..2358625 - 91 86609698 - CYB_2256 - hypothetical protein 2195 60.44 0 2358884..2359927 + 347 86609699 glpX CYB_2257 - fructose 1,6-bisphosphatase II 2196 60.42 0 2360255..2361550 + 431 86609700 hemA CYB_2258 - glutamyl-tRNA reductase 2197 56.48 0 2361658..2361765 + 35 86609701 - CYB_2259 - hypothetical protein 2198 59.79 0 2361940..2363757 + 605 86609702 typA CYB_2260 - GTP-binding protein TypA 2199 62.30 0 2363788..2365941 - 717 86609703 - CYB_2261 - putative peptidase 2200 63.33 +1 2366011..2367327 - 438 86609704 cinA CYB_2262 - competence/damage-inducible protein CinA 2201 63.14 +1 2368188..2369462 - 424 86609705 - CYB_2263 - ISSoc9, transposase 2202 56.54 0 2369616..2370020 - 134 86609706 - CYB_2264 - universal stress family protein 2203 50.94 -1 2370236..2370979 - 247 86609707 - CYB_2265 - hypothetical protein 2204 61.99 0 2371217..2372797 - 526 86609708 - CYB_2266 - PsbB/PsbC family photosystem II protein 2205 46.67 -2 2372845..2373354 - 169 86609709 - CYB_2267 - flavodoxin FldA 2206 58.36 0 2373428..2374462 - 344 86609710 - CYB_2268 - PsbB/PsbC family photosystem II protein 2207 57.58 0 2374853..2376085 + 410 86609711 - CYB_2269 - putative iron-regulated protein A 2208 60.33 0 2376131..2377504 + 457 86609712 - CYB_2271 - hypothetical protein 2209 50.52 -1 2377501..2378175 - 224 86609713 - CYB_2270 - putative hydroxylase 2210 48.33 -2 2378537..2379196 + 219 86609714 - CYB_2273 - hypothetical protein 2211 44.44 -2 2379193..2379525 - 110 86609715 - CYB_2272 - cupin domain-containing protein 2212 48.52 -2 2379525..2380301 - 258 86609716 - CYB_2274 - hypothetical protein 2213 47.36 -2 2380544..2381206 - 220 86609717 - CYB_2275 - hypothetical protein 2214 63.01 +1 2381533..2383281 + 582 86609718 mutL CYB_2276 - DNA mismatch repair protein 2215 61.38 0 2383318..2384169 + 283 86609719 - CYB_2278 - VKORC1/thioredoxin domain-containing protein 2216 59.54 0 2384145..2385239 - 364 86609720 - CYB_2277 - response regulator 2217 61.49 0 2385306..2386193 - 295 86609721 btpA CYB_2279 - photosystem I biogenesis protein BtpA 2218 61.61 0 2386225..2387370 - 381 86609722 pyrD CYB_2280 - dihydroorotate dehydrogenase 2 2219 62.21 0 2387498..2388799 - 433 86609723 - CYB_2281 - O-antigen polymerase family protein 2220 60.94 0 2388799..2389182 - 127 86609724 - CYB_2282 - ferredoxin, 2Fe-2S 2221 56.98 0 2389380..2389823 + 147 86609725 - CYB_2283 - mannose-6-phosphate isomerase 2222 60.03 0 2389874..2392255 - 793 86609726 - CYB_2284 - M48B family peptidase 2223 52.57 -1 2392458..2392904 - 148 86609727 - CYB_2285 - FUR family transcriptional regulator 2224 58.53 0 2393261..2393641 + 126 86609728 - CYB_2286 - hypothetical protein 2225 61.54 0 2393681..2395045 + 454 86609729 - CYB_2287 - putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2226 59.02 0 2395303..2395812 + 169 86609730 - CYB_2289 - hypothetical protein 2227 59.23 0 2395870..2396205 + 111 86609731 - CYB_2290 - hypothetical protein 2228 56.00 0 2396321..2396470 + 49 86609732 - CYB_2291 - hypothetical protein 2229 60.24 0 2396569..2397330 + 253 86609733 pyrH CYB_2292 - uridylate kinase 2230 60.42 0 2397587..2398834 + 415 86609734 - CYB_2293 - hypothetical protein 2231 57.17 0 2398846..2399319 + 157 86609735 yqeG CYB_2294 - HAD family phosphatase 2232 55.56 0 2399770..2400417 + 215 86609736 - CYB_2295 - hypothetical protein 2233 58.78 0 2401039..2401989 + 316 86609737 - CYB_2296 - LysR family transcriptional regulator 2234 59.76 0 2402264..2403088 + 274 86609738 - CYB_2297 - alpha/beta fold family hydrolase 2235 62.89 +1 2403206..2404264 - 352 86609739 thrC-1 CYB_2298 - threonine synthase 2236 63.93 +1 2404435..2406081 - 548 86609740 - CYB_2299 - isochorismate synthase 2237 61.57 0 2406353..2407294 + 313 86609741 menA CYB_2300 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2238 62.32 0 2407449..2409242 + 597 86609742 - CYB_2301 - hypothetical protein 2239 55.92 0 2409410..2410498 + 362 86609743 - CYB_2302 - YjgP/YjgQ permease 2240 62.02 0 2410495..2413935 + 1146 86609744 - CYB_2303 - hypothetical protein 2241 63.73 +1 2413980..2415611 - 543 86609745 - CYB_2304 - phosphoglucomutase 2242 58.20 0 2415751..2417037 - 428 86609746 - CYB_2305 - major facilitator transporter 2243 59.74 0 2417063..2418073 - 336 86609747 gap-3 CYB_2306 - glyceraldehyde-3-phosphate dehydrogenase, type I 2244 59.80 0 2418300..2418983 + 227 86609748 - CYB_2307 - hypothetical protein 2245 55.42 0 2419213..2419452 + 79 86609749 - CYB_2308 - DNA-directed RNA polymerase subunit omega 2246 60.59 0 2419549..2421423 - 624 86609750 - CYB_2309 - small conductance mechanosensitive ion channel (MscS) family protein 2247 59.25 0 2421462..2422580 - 372 86609751 cax CYB_2310 - calcium/proton exchanger 2248 59.40 0 2422796..2423566 - 256 86609752 - CYB_2311 - hypothetical protein 2249 56.06 0 2423643..2423906 - 87 86609753 - CYB_2312 - ISSoc11, transposase orfB 2250 53.75 -1 2424098..2424871 - 257 86609754 - CYB_2313 - ISSoc11, transposase orfA 2251 58.01 0 2425230..2425610 - 126 86609755 - CYB_2314 - hypothetical protein 2252 60.47 0 2426036..2426938 - 300 86609756 - CYB_2315 - putative cysteine synthase B 2253 61.38 0 2427164..2428297 + 377 86609757 cobO-1 CYB_2316 - hypothetical protein 2254 62.13 0 2428297..2429046 + 249 86609758 - CYB_2317 - acyltransferase family protein 2255 63.95 +1 2429085..2429858 + 257 86609759 - CYB_2319 - alpha/beta fold family hydrolase 2256 62.81 +1 2429836..2430561 - 241 86609760 - CYB_2318 - haloacid dehalogenase, IA family protein 2257 59.45 0 2430558..2431541 - 327 86609761 - CYB_2320 - PhoH family protein 2258 47.71 -2 2431967..2432119 + 50 86609762 - CYB_2321 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0