version 1.0
Synechococcus sp. JA-2-3B'a(2-13), complete genome - 1..3046682 2862 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2008 62.14 0 2160617..2162161 + 514 86609512 - CYB_2064 - major facilitator transporter 2009 59.40 0 2162301..2163470 + 389 86609513 - CYB_2065 - glycosyl transferase, group 1 family protein 2010 59.13 0 2163803..2165248 + 481 86609514 - CYB_2066 - GAF/SpoIIE domain-containing protein 2011 44.71 -2 2165301..2165678 + 125 86609515 - CYB_2067 - ISSoc13, transposase orfA 2012 43.14 -2 2165636..2166043 + 135 86609516 - CYB_2068 - ISSoc13, transposase orfB 2013 55.25 0 2166533..2166751 + 72 86609517 - CYB_2069 - hypothetical protein 2014 61.09 0 2166882..2168315 + 477 86609518 argH CYB_2070 - argininosuccinate lyase 2015 56.02 0 2168361..2169515 - 384 86609519 - CYB_2071 - ISSoc1, transposase 2016 62.63 +1 2169715..2170011 + 98 86609520 - CYB_2072 - hypothetical protein 2017 59.51 0 2170173..2170661 + 162 86609521 - CYB_2073 - Mov34/MPN/PAD-1 family protein 2018 57.80 0 2170908..2171189 + 93 86609522 - CYB_2074 - ThiS domain-containing protein 2019 59.40 0 2171192..2172361 + 389 86609523 - CYB_2075 - hypothetical protein 2020 60.93 0 2172472..2173725 + 417 86609524 ribAB CYB_2077 - riboflavin biosynthesis protein RibA 2021 58.62 0 2173714..2174148 - 144 86609525 - CYB_2076 - hypothetical protein 2022 61.69 0 2174263..2175306 - 347 86609526 - CYB_2078 - GntR family transcriptional regulator 2023 58.62 0 2175462..2176580 - 372 86609527 - CYB_2079 - polyamine ABC transporter, ATP-binding protein 2024 43.75 -2 2176757..2176852 + 31 86609528 - CYB_2080 - hypothetical protein 2025 58.29 0 2176931..2177467 + 178 86609529 - CYB_2081 - DoxX family protein 2026 60.87 0 2177548..2179722 - 724 86609530 ppk CYB_2082 - polyphosphate kinase 2027 59.38 0 2179781..2180740 - 319 86609531 - CYB_2083 - hydrophobic amino acid ABC transporter permease 2028 59.77 0 2180740..2181609 - 289 86609532 - CYB_2084 - hydrophobic amino acid ABC transporter permease 2029 44.71 -2 2181775..2182152 + 125 86609533 - CYB_2085 - ISSoc13, transposase orfA 2030 42.89 -2 2182110..2182517 + 135 86609534 - CYB_2086 - ISSoc13, transposase orfB 2031 63.04 +1 2182578..2183543 + 321 86609535 - CYB_2087 - putative lipoprotein 2032 64.50 +1 2183651..2185402 + 583 86609536 - CYB_2088 - sulfatase 2033 57.98 0 2185415..2185909 - 164 86609537 - CYB_2089 - hypothetical protein 2034 64.04 +1 2186454..2187215 + 253 86609538 fabG CYB_2090 - 3-oxoacyl-(acyl-carrier-protein) reductase 2035 64.23 +1 2187221..2188864 - 547 86609539 ggt CYB_2091 - gamma-glutamyltransferase 2036 61.49 0 2188902..2189771 - 289 86609540 - CYB_2092 - HAD family hydrolase 2037 62.54 0 2189704..2190357 - 217 86609541 - CYB_2093 - hypothetical protein 2038 60.83 0 2190370..2190609 - 79 86609542 secG CYB_2094 - preprotein translocase subunit SecG 2039 53.33 -1 2191281..2191415 + 44 86609543 - CYB_2095 - hypothetical protein 2040 55.68 0 2191976..2192503 - 175 86609544 - CYB_2096 - NADPH-dependent FMN reductase 2041 55.63 0 2192898..2193341 + 147 86609545 - CYB_2098 - hypothetical protein 2042 59.25 0 2193347..2194222 - 291 86609546 nusB CYB_2099 - transcription antitermination factor NusB 2043 61.76 0 2194342..2196501 - 719 86609547 - CYB_2100 - UvrD/Rep family helicase 2044 59.12 0 2196513..2197373 - 286 86609548 - CYB_2101 - HAD family hydrolase 2045 60.06 0 2197590..2198528 + 312 86609549 - CYB_2102 - hypothetical protein 2046 60.58 0 2198611..2199366 + 251 86609550 - CYB_2103 - hypothetical protein 2047 61.09 0 2199443..2200213 + 256 86609551 - CYB_2104 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2048 58.33 0 2200213..2200356 + 47 86609552 - CYB_2105 - hypothetical protein 2049 62.55 +1 2200320..2201048 + 242 86609553 - CYB_2106 - HEAT repeat-containing PBS lyase 2050 56.76 0 2201189..2201854 - 221 86609554 chlM CYB_2107 - Mg-protoporphyrin IX methyl transferase 2051 56.83 0 2202025..2202522 + 165 86609555 - CYB_2108 - hypothetical protein 2052 61.15 0 2202565..2203542 - 325 86609556 ddlB CYB_2109 - D-alanine--D-alanine ligase B 2053 60.57 0 2203612..2204727 - 371 86609557 ftsZ CYB_2110 - cell division protein FtsZ 2054 53.89 -1 2205522..2206241 - 239 86609558 - CYB_2111 - hypothetical protein 2055 60.95 0 2206276..2207412 - 378 86609559 - CYB_2112 - UDP-N-acetylglucosamine 2-epimerase 2056 56.03 0 2207570..2207710 - 46 86609560 - CYB_2113 - hypothetical protein 2057 56.74 0 2208276..2209715 + 479 86609561 mgtE CYB_2114 - magnesium transporter 2058 52.44 -1 2209866..2210111 + 81 86609562 - CYB_2115 - hypothetical protein 2059 59.12 0 2210139..2210840 + 233 86609563 - CYB_2116 - mgtC family protein 2060 55.28 0 2210859..2212052 - 397 86609564 - CYB_2117 - ISSoc1, transposase 2061 56.73 0 2212141..2212764 - 207 86609565 - CYB_2118 - hypothetical protein 2062 59.45 0 2213302..2213703 + 133 86609566 - CYB_2119 - hypothetical protein 2063 54.47 0 2213985..2214230 + 81 86609567 - CYB_2121 - hypothetical protein 2064 59.12 0 2214227..2214769 - 180 86609568 - CYB_2120 - hypothetical protein 2065 55.35 0 2214904..2215566 - 220 86609569 - CYB_2122 - hypothetical protein 2066 59.18 0 2215664..2216611 - 315 86609570 - CYB_2123 - nucleotidyl transferase family protein 2067 57.64 0 2217040..2217903 + 287 86609571 - CYB_2124 - cystine ABC transporter, periplasmic cystine-binding protein 2068 57.43 0 2217975..2218721 + 248 86609572 - CYB_2125 - cystine ABC transporter, permease protein 2069 55.94 0 2219259..2220470 + 403 86609573 - CYB_2126 - ISSoc1, transposase 2070 60.37 0 2220623..2222338 + 571 86609574 sdhA CYB_2127 - succinate dehydrogenase flavoprotein subunit 2071 59.08 0 2222478..2223875 + 465 86609575 - CYB_2128 - beta alanine--pyruvate transaminase 2072 62.23 0 2223909..2224652 - 247 86609576 - CYB_2129 - putative lipoprotein 2073 64.04 +1 2223997..2224110 + 37 86609577 - CYB_2130 - hypothetical protein 2074 61.57 0 2224919..2226547 + 542 86609578 purF CYB_2131 - amidophosphoribosyltransferase 2075 60.00 0 2226600..2227124 + 174 86609579 def-1 CYB_2132 - peptide deformylase 2076 57.83 0 2227136..2227633 + 165 86609580 - CYB_2133 - hypothetical protein 2077 58.43 0 2227567..2228805 + 412 86609581 - CYB_2134 - pentapeptide repeat-containing protein 2078 60.75 0 2229594..2229965 + 123 86609582 - CYB_2135 - hypothetical protein 2079 48.95 -2 2230154..2230390 + 78 86609583 gvpG CYB_2136 - gas vesicle protein G 2080 55.45 0 2230498..2231103 + 201 86609584 - CYB_2138 - hypothetical protein 2081 56.59 0 2231100..2231228 - 42 86609585 - CYB_2137 - hypothetical protein 2082 60.66 0 2231650..2233479 + 609 86609586 - CYB_2139 - fibronectin-binding protein 2083 65.10 +1 2233527..2238314 - 1595 86609587 - CYB_2140 - alpha-2-macroglobulin family protein 2084 59.25 0 2238427..2239653 - 408 86609588 pilC CYB_2141 - type IV pilus assembly protein PilC 2085 60.21 0 2239851..2240981 - 376 86609589 pilT-2 CYB_2142 - twitching motility protein 2086 59.75 0 2241125..2243206 - 693 86609590 pilB CYB_2143 - type IV pilus assembly protein PilB 2087 60.13 0 2243363..2245000 - 545 86609591 - CYB_2144 - acetolactate synthase 2088 61.92 0 2245179..2246231 + 350 86609592 - CYB_2145 - mandelate racemase/muconate lactonizing enzyme family protein 2089 64.88 +1 2246231..2247292 + 353 86609593 - CYB_2146 - hypothetical protein 2090 55.19 0 2247372..2248565 + 397 86609594 - CYB_2147 - ISSoc1, transposase 2091 58.50 0 2249079..2249666 + 195 86609595 - CYB_2148 - hypothetical protein 2092 60.33 0 2249862..2250650 + 262 86609596 map-1 CYB_2149 - methionine aminopeptidase 2093 62.77 +1 2250657..2252528 + 623 86609597 - CYB_2150 - chloride channel (ClC) family protein 2094 62.91 +1 2252545..2253183 - 212 86609598 - CYB_2151 - base excision DNA repair protein 2095 63.86 +1 2253304..2254407 - 367 86609599 murG CYB_2152 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2096 61.78 0 2254438..2255439 - 333 86609600 - CYB_2153 - Ycf48-like protein 2097 55.56 0 2255436..2255786 - 116 86609601 - CYB_2154 - rubredoxin 2098 55.47 0 2256065..2256475 + 136 86609602 - CYB_2155 - FHA domain-containing protein 2099 51.85 -1 2256542..2256649 - 35 86609603 - CYB_2156 - hypothetical protein 2100 60.42 0 2256715..2257467 + 250 86609604 tpiA CYB_2157 - triosephosphate isomerase 2101 50.68 -1 2257472..2260273 - 933 86609605 treY CYB_2158 - malto-oligosyltrehalose synthase 2102 59.79 0 2260449..2261117 + 222 86609606 - CYB_2159 - hypothetical protein 2103 56.90 0 2261152..2262021 + 289 86609607 - CYB_2160 - M48A family peptidase 2104 63.00 +1 2262301..2263200 + 299 86609608 - CYB_2162 - PfkB family kinase 2105 59.01 0 2263194..2264918 - 574 86609609 - CYB_2161 - ABC transporter, permease/ATP-binding protein 2106 58.43 0 2264955..2266970 - 671 86609610 - CYB_2163 - sensory box protein 2107 58.33 0 2267646..2268005 + 119 86609611 - CYB_2164 - hypothetical protein 58.48 MEAN 4.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0